RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 A0A1B0GWA3 101 aa10□□□□□ -0.81
LIG3-207ENST00000586119 BBIP1A8MTZ0 92 aa10□□□□□ -0.81
LIG3-207ENST00000586119 HNRNPCL2B2RXH8 293 aa10□□□□□ -0.81
LIG3-207ENST00000586119 HNRNPCL3B7ZW38 293 aa10□□□□□ -0.81
LIG3-207ENST00000586119 LRRN3E7EW58 273 aa10□□□□□ -0.81
LIG3-207ENST00000586119 TRAF3IP2O43734 574 aaPredicted RBP10□□□□□ -0.81
LIG3-207ENST00000586119 HNRNPCL1O60812 293 aaKnown RBP10□□□□□ -0.81
LIG3-207ENST00000586119 ANP32DO95626 131 aa10□□□□□ -0.81
LIG3-207ENST00000586119 HNRNPCL4P0DMR1 293 aa10□□□□□ -0.81
LIG3-207ENST00000586119 CD79AP11912 226 aa10□□□□□ -0.81
LIG3-207ENST00000586119 NR4A1P22736 598 aa10□□□□□ -0.81
LIG3-207ENST00000586119 CFPP27918 469 aa10□□□□□ -0.81
LIG3-207ENST00000586119 PRDX6P30041 224 aa10□□□□□ -0.81
LIG3-207ENST00000586119 ARR3P36575 388 aa10□□□□□ -0.81
LIG3-207ENST00000586119 ALDH3B1P43353 468 aa10□□□□□ -0.81
LIG3-207ENST00000586119 TXNL4AP83876 142 aaKnown RBP10□□□□□ -0.81
LIG3-207ENST00000586119 RUNX1T1Q06455 604 aa10□□□□□ -0.81
LIG3-207ENST00000586119 C1DQ13901 141 aaKnown RBP10□□□□□ -0.81
LIG3-207ENST00000586119 FAM91A1Q658Y4 838 aa10□□□□□ -0.81
LIG3-207ENST00000586119 SLC2A7Q6PXP3 512 aa10□□□□□ -0.81
LIG3-207ENST00000586119 C20orf196Q8IYI0 205 aa10□□□□□ -0.81
LIG3-207ENST00000586119 CLDND2Q8NHS1 167 aa10□□□□□ -0.81
LIG3-207ENST00000586119 RP9Q8TA86 221 aaKnown RBP10□□□□□ -0.81
LIG3-207ENST00000586119 HPS1Q92902 700 aa10□□□□□ -0.81
LIG3-207ENST00000586119 YIPF5Q969M3 257 aa10□□□□□ -0.81
LIG3-207ENST00000586119 ANKRD27Q96NW4 1050 aa10□□□□□ -0.81
LIG3-207ENST00000586119 LRRC37BQ96QE4 947 aa10□□□□□ -0.81
LIG3-207ENST00000586119 PLA2G12AQ9BZM1 189 aa10□□□□□ -0.81
LIG3-207ENST00000586119 METTL17Q9H7H0 456 aaPredicted RBP10□□□□□ -0.81
LIG3-207ENST00000586119 MED29Q9NX70 200 aa10□□□□□ -0.81
LIG3-207ENST00000586119 ZNF224Q9NZL3 707 aa10□□□□□ -0.81
LIG3-207ENST00000586119 CALML5Q9NZT1 146 aa10□□□□□ -0.81
LIG3-207ENST00000586119 REV1Q9UBZ9 1251 aa10□□□□□ -0.81
LIG3-207ENST00000586119 NDUFAF1Q9Y375 327 aa10□□□□□ -0.81
LIG3-207ENST00000586119 PCDHB14Q9Y5E9 798 aa10□□□□□ -0.81
LIG3-207ENST00000586119 A0A096LPI6 279 aa9.99□□□□□ -0.81
LIG3-207ENST00000586119 ZNF99A8MXY4 864 aaPredicted RBP9.99□□□□□ -0.81
LIG3-207ENST00000586119 ANGPT2O15123 496 aa9.99□□□□□ -0.81
LIG3-207ENST00000586119 WIPF1O43516 503 aa9.99□□□□□ -0.81
LIG3-207ENST00000586119 TPST2O60704 377 aa9.99□□□□□ -0.81
LIG3-207ENST00000586119 NPPAP01160 153 aa9.99□□□□□ -0.81
LIG3-207ENST00000586119 ZNF35P13682 527 aa9.99□□□□□ -0.81
LIG3-207ENST00000586119 DVL1P1P54792 670 aaPredicted RBP9.99□□□□□ -0.81
LIG3-207ENST00000586119 SH3BGRP55822 239 aaPredicted RBP9.99□□□□□ -0.81
LIG3-207ENST00000586119 CAMK2DQ13557 499 aa9.99□□□□□ -0.81
LIG3-207ENST00000586119 CYLC2Q14093 348 aaPredicted RBP9.99□□□□□ -0.81
LIG3-207ENST00000586119 RGNQ15493 299 aa9.99□□□□□ -0.81
LIG3-207ENST00000586119 ALKBH6Q3KRA9 238 aa9.99□□□□□ -0.81
LIG3-207ENST00000586119 C12orf54Q6X4T0 127 aa9.99□□□□□ -0.81
LIG3-207ENST00000586119 THSD4Q6ZMP0 1018 aa9.99□□□□□ -0.81
LIG3-207ENST00000586119 DEF8Q6ZN54 512 aa9.99□□□□□ -0.81
LIG3-207ENST00000586119 H1FNTQ75WM6 255 aaPredicted RBP9.99□□□□□ -0.81
LIG3-207ENST00000586119 DPP10Q8N608 796 aa9.99□□□□□ -0.81
LIG3-207ENST00000586119 GTF2H4Q92759 462 aa9.99□□□□□ -0.81
LIG3-207ENST00000586119 MRPL24Q96A35 216 aaKnown RBP9.99□□□□□ -0.81
LIG3-207ENST00000586119 PAIP1Q9H074 479 aaKnown RBP9.99□□□□□ -0.81
LIG3-207ENST00000586119 TREM2Q9NZC2 230 aa9.99□□□□□ -0.81
LIG3-207ENST00000586119 SLAMF8Q9P0V8 285 aa9.99□□□□□ -0.81
LIG3-207ENST00000586119 METRNQ9UJH8 293 aa9.99□□□□□ -0.81
LIG3-207ENST00000586119 RCE1Q9Y256 329 aa9.99□□□□□ -0.81
LIG3-207ENST00000586119 CMAHPQ9Y471 501 aa9.99□□□□□ -0.81
LIG3-207ENST00000586119 GMEB1Q9Y692 573 aa9.99□□□□□ -0.81
LIG3-207ENST00000586119 TENM1Q9UKZ4 2725 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 VSTM5A8MXK1 200 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 CLIC1O00299 241 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 AIM2O14862 343 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 FZD7O75084 574 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 NCR1O76036 304 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 AVPP01185 164 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 BGLAPP02818 100 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 NAT2P11245 290 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 B4GALT1P15291 398 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 ZNF14P17017 642 aaPredicted RBP9.98□□□□□ -0.81
LIG3-207ENST00000586119 HOXB9P17482 250 aaPredicted RBP9.98□□□□□ -0.81
LIG3-207ENST00000586119 PPIBP23284 216 aaKnown RBP9.98□□□□□ -0.81
LIG3-207ENST00000586119 PAX7P23759 505 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 GTF2E2P29084 291 aaKnown RBP9.98□□□□□ -0.81
LIG3-207ENST00000586119 PTDSS1P48651 473 aaKnown RBP9.98□□□□□ -0.81
LIG3-207ENST00000586119 RAB39AQ14964 217 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 MFSD13AQ14CX5 517 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 C6orf10Q5SRN2 563 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 LRIF1Q5T3J3 769 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 C6orf89Q6UWU4 347 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 ZNF813Q6ZN06 617 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 C1orf229Q6ZS94 237 aaPredicted RBP9.98□□□□□ -0.81
LIG3-207ENST00000586119 MEX3DQ86XN8 651 aaKnown RBP9.98□□□□□ -0.81
LIG3-207ENST00000586119 MSRB3Q8IXL7 192 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 PCYOX1LQ8NBM8 494 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 PIK3C3Q8NEB9 887 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 ANKK1Q8NFD2 765 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 NFKBIDQ8NI38 313 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 RNF217Q8TC41 542 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 CMTM5Q96DZ9 223 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 MOGAT1Q96PD6 335 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 TSPAN32Q96QS1 320 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 BCL2L10Q9HD36 194 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 HIF1ANQ9NWT6 349 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 SLC25A37Q9NYZ2 338 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 ARMCX1Q9P291 453 aa9.98□□□□□ -0.81
LIG3-207ENST00000586119 RPS6KB2Q9UBS0 482 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms