RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 MAVSQ7Z434 540 aa12.41□□□□□ -0.42
SDF2-202ENST00000585428 PXKQ7Z7A4 578 aa12.41□□□□□ -0.42
SDF2-202ENST00000585428 SCAIQ8N9R8 606 aa12.41□□□□□ -0.42
SDF2-202ENST00000585428 OR9I1Q8NGQ6 314 aa12.41□□□□□ -0.42
SDF2-202ENST00000585428 SLC47A1Q96FL8 570 aa12.41□□□□□ -0.42
SDF2-202ENST00000585428 SYT3Q9BQG1 590 aa12.41□□□□□ -0.42
SDF2-202ENST00000585428 MED29Q9NX70 200 aa12.41□□□□□ -0.42
SDF2-202ENST00000585428 MYEF2Q9P2K5 600 aaKnown RBP12.41□□□□□ -0.42
SDF2-202ENST00000585428 POFUT2Q9Y2G5 429 aa12.41□□□□□ -0.42
SDF2-202ENST00000585428 NOX1Q9Y5S8 564 aa12.41□□□□□ -0.42
SDF2-202ENST00000585428 PLPP3O14495 311 aa12.4□□□□□ -0.42
SDF2-202ENST00000585428 UBDO15205 165 aa12.4□□□□□ -0.42
SDF2-202ENST00000585428 TFP02787 698 aa12.4□□□□□ -0.42
SDF2-202ENST00000585428 SERPINA5P05154 406 aa12.4□□□□□ -0.42
SDF2-202ENST00000585428 GAAP10253 952 aa12.4□□□□□ -0.42
SDF2-202ENST00000585428 GIPRP48546 466 aa12.4□□□□□ -0.42
SDF2-202ENST00000585428 PTDSS1P48651 473 aaKnown RBP12.4□□□□□ -0.42
SDF2-202ENST00000585428 GLIPR1L2Q4G1C9 344 aa12.4□□□□□ -0.42
SDF2-202ENST00000585428 C6orf10Q5SRN2 563 aa12.4□□□□□ -0.42
SDF2-202ENST00000585428 HHATQ5VTY9 493 aa12.4□□□□□ -0.42
SDF2-202ENST00000585428 REP15Q6BDI9 236 aa12.4□□□□□ -0.42
SDF2-202ENST00000585428 LINC00114Q6XXX2 140 aa12.4□□□□□ -0.42
SDF2-202ENST00000585428 C1orf229Q6ZS94 237 aaPredicted RBP12.4□□□□□ -0.42
SDF2-202ENST00000585428 PIWIL3Q7Z3Z3 882 aaKnown RBP12.4□□□□□ -0.42
SDF2-202ENST00000585428 ZNF584Q8IVC4 421 aa12.4□□□□□ -0.42
SDF2-202ENST00000585428 FGFBP3Q8TAT2 258 aa12.4□□□□□ -0.42
SDF2-202ENST00000585428 MOGAT1Q96PD6 335 aa12.4□□□□□ -0.42
SDF2-202ENST00000585428 OR52B2Q96RD2 323 aa12.4□□□□□ -0.42
SDF2-202ENST00000585428 FOXB1Q99853 325 aa12.4□□□□□ -0.42
SDF2-202ENST00000585428 WFDC6Q9BQY6 131 aa12.4□□□□□ -0.42
SDF2-202ENST00000585428 RAD21L1Q9H4I0 556 aa12.4□□□□□ -0.42
SDF2-202ENST00000585428 B3GAT2Q9NPZ5 323 aa12.4□□□□□ -0.42
SDF2-202ENST00000585428 ZNF275Q9NSD4 429 aaPredicted RBP12.4□□□□□ -0.42
SDF2-202ENST00000585428 MRPL39Q9NYK5 338 aaKnown RBP12.4□□□□□ -0.42
SDF2-202ENST00000585428 SLC25A37Q9NYZ2 338 aa12.4□□□□□ -0.42
SDF2-202ENST00000585428 TREM2Q9NZC2 230 aa12.4□□□□□ -0.42
SDF2-202ENST00000585428 GMEB1Q9Y692 573 aa12.4□□□□□ -0.42
SDF2-202ENST00000585428 A0A0B4J2E0 115 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 A0A1B0GX12 115 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 TMEM89A2RUT3 159 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 ZNF726A6NNF4 738 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 RP2O75695 350 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 AVPP01185 164 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 SAGP10523 405 aaPredicted RBP12.39□□□□□ -0.43
SDF2-202ENST00000585428 NAT2P11245 290 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 B4GALT1P15291 398 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 NQO1P15559 274 aaKnown RBP12.39□□□□□ -0.43
SDF2-202ENST00000585428 EGR1P18146 543 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 PUDPQ08623 228 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 PMS2P3Q13401 168 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 CAMK2DQ13557 499 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 RAB39AQ14964 217 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 MAD2L1BPQ15013 274 aaPredicted RBP12.39□□□□□ -0.43
SDF2-202ENST00000585428 OR1Q1Q15612 314 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 CEP85LQ5SZL2 805 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 GKAP1Q5VSY0 366 aaPredicted RBP12.39□□□□□ -0.43
SDF2-202ENST00000585428 REEP3Q6NUK4 255 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 SLC2A7Q6PXP3 512 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 WDR88Q6ZMY6 472 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 USP43Q70EL4 1123 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 SNX32Q86XE0 403 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 SKA3Q8IX90 412 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 MSRB3Q8IXL7 192 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 C10orf111Q8N326 155 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 FAM216AQ8WUB2 273 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 LRRC37BQ96QE4 947 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 ASPNQ9BXN1 380 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 PARD6BQ9BYG5 372 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 CENPHQ9H3R5 247 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 ZNF385DQ9H6B1 395 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 NARFLQ9H6Q4 476 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 SLAMF8Q9P0V8 285 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 DUSP13Q9UII6 198 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 FBXL3Q9UKT7 428 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 FZR1Q9UM11 496 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 GRIP1Q9Y3R0 1128 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 TENM1Q9UKZ4 2725 aa12.39□□□□□ -0.43
SDF2-202ENST00000585428 C5orf58C9J3I9 102 aa12.38□□□□□ -0.43
SDF2-202ENST00000585428 WIPF1O43516 503 aa12.38□□□□□ -0.43
SDF2-202ENST00000585428 SPRY1O43609 319 aaPredicted RBP12.38□□□□□ -0.43
SDF2-202ENST00000585428 NCR1O76036 304 aa12.38□□□□□ -0.43
SDF2-202ENST00000585428 UBL3O95164 117 aa12.38□□□□□ -0.43
SDF2-202ENST00000585428 PATE4P0C8F1 98 aa12.38□□□□□ -0.43
SDF2-202ENST00000585428 ARAFP10398 606 aa12.38□□□□□ -0.43
SDF2-202ENST00000585428 MRPL19P49406 292 aaKnown RBP12.38□□□□□ -0.43
SDF2-202ENST00000585428 SLC18A1P54219 525 aa12.38□□□□□ -0.43
SDF2-202ENST00000585428 RPS23P62266 143 aaKnown RBP12.38□□□□□ -0.43
SDF2-202ENST00000585428 MYBPC1Q00872 1141 aa12.38□□□□□ -0.43
SDF2-202ENST00000585428 GALK2Q01415 458 aa12.38□□□□□ -0.43
SDF2-202ENST00000585428 LRIF1Q5T3J3 769 aa12.38□□□□□ -0.43
SDF2-202ENST00000585428 FAHD2BQ6P2I3 314 aaPredicted RBP12.38□□□□□ -0.43
SDF2-202ENST00000585428 LRFN4Q6PJG9 635 aa12.38□□□□□ -0.43
SDF2-202ENST00000585428 MIER2Q8N344 545 aa12.38□□□□□ -0.43
SDF2-202ENST00000585428 ANKRD42Q8N9B4 389 aa12.38□□□□□ -0.43
SDF2-202ENST00000585428 OR6N1Q8NGY5 312 aa12.38□□□□□ -0.43
SDF2-202ENST00000585428 OR51F2Q8NH61 342 aa12.38□□□□□ -0.43
SDF2-202ENST00000585428 NFKBIDQ8NI38 313 aa12.38□□□□□ -0.43
SDF2-202ENST00000585428 TMEM54Q969K7 222 aa12.38□□□□□ -0.43
SDF2-202ENST00000585428 ZBTB9Q96C00 473 aa12.38□□□□□ -0.43
SDF2-202ENST00000585428 FAHD2AQ96GK7 314 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms