RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 MED20Q9H944 212 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 KLHL1Q9NR64 748 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 NDUFB11Q9NX14 153 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 BABAM2Q9NXR7 383 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 ALKBH4Q9NXW9 302 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 TAS2R16Q9NYV7 291 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 STMN3Q9NZ72 180 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 ZNF346Q9UL40 294 aaKnown RBP9.36□□□□□ -0.91
LIG3-203ENST00000585370 STUB1Q9UNE7 303 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 SSR3Q9UNL2 185 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 TRAPPC4Q9Y296 219 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 MRPS18CQ9Y3D5 142 aaKnown RBP9.36□□□□□ -0.91
LIG3-203ENST00000585370 HDGFL3Q9Y3E1 203 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 ADAM18Q9Y3Q7 739 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 A3GALT2U3KPV4 340 aa9.36□□□□□ -0.91
LIG3-203ENST00000585370 EXPH5Q8NEV8 1989 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 TEX13CA0A0J9YWL9 993 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 ZC3H12DA2A288 527 aaKnown RBP9.35□□□□□ -0.91
LIG3-203ENST00000585370 OR6C68A6NDL8 312 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 LIPT2A6NK58 231 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 C12orf71A8MTZ7 269 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 CENPBD1B2RD01 187 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 CLPXO76031 633 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 MT-ND5P03915 603 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 GAAP10253 952 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 ZNF17P17021 662 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 ZNF182P17025 639 aaPredicted RBP9.35□□□□□ -0.91
LIG3-203ENST00000585370 SPI1P17947 270 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 CDKN2AP42771 156 aaKnown RBP9.35□□□□□ -0.91
LIG3-203ENST00000585370 ACTA2P62736 377 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 ACTG2P63267 376 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 FOXK1P85037 733 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 Q0VFX4 171 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 AQP6Q13520 282 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 KRR1Q13601 381 aaKnown RBP9.35□□□□□ -0.91
LIG3-203ENST00000585370 SPCS2Q15005 226 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 TRAM1Q15629 374 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 ZNF239Q16600 458 aaKnown RBP9.35□□□□□ -0.91
LIG3-203ENST00000585370 MOGQ16653 247 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 CRTC2Q53ET0 693 aaPredicted RBP9.35□□□□□ -0.91
LIG3-203ENST00000585370 ABHD17BQ5VST6 288 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 C1QL3Q5VWW1 255 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 FCRLBQ6BAA4 426 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 ZNF322Q6U7Q0 402 aaPredicted RBP9.35□□□□□ -0.91
LIG3-203ENST00000585370 HDDC2Q7Z4H3 204 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 KCTD20Q7Z5Y7 419 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 IGFN1Q86VF2 1251 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 ATCAYQ86WG3 371 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 SYS1Q8N2H4 156 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 CYB561A3Q8NBI2 242 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 POC1BQ8TC44 478 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 GATAD2BQ8WXI9 593 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 THOC3Q96J01 351 aaKnown RBP9.35□□□□□ -0.91
LIG3-203ENST00000585370 DACH2Q96NX9 599 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 ZNF649Q9BS31 505 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 HCAR1Q9BXC0 346 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 ADGRL4Q9HBW9 690 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 CHST11Q9NPF2 352 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 ASB6Q9NWX5 421 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 VDAC3Q9Y277 283 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 GSTK1Q9Y2Q3 226 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 FKBP7Q9Y680 259 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 TEX15Q9BXT5 2789 aa9.35□□□□□ -0.91
LIG3-203ENST00000585370 SPTBN1Q01082 2364 aaKnown RBP9.34□□□□□ -0.91
LIG3-203ENST00000585370 LOC102725191A0A1B0GVB3 256 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 GJE1A6NN92 205 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 C17orf51A8MQB3 221 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 LINC01387J3KSC0 135 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 K7EM74 188 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 HLA-DPB1P04440 258 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 F13BP05160 661 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 CCL3P10147 92 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 CNR1P21554 472 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 AHCYP23526 432 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 DPP4P27487 766 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 CRABP1P29762 137 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 PEX19P40855 299 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 DAP3P51398 398 aaKnown RBP9.34□□□□□ -0.91
LIG3-203ENST00000585370 RRADP55042 308 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 VBP1P61758 197 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 SLC35A1P78382 337 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 PUDPQ08623 228 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 MRPL28Q13084 256 aaKnown RBP9.34□□□□□ -0.91
LIG3-203ENST00000585370 SSX1Q16384 188 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 DCAF10Q5QP82 559 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 OR2G6Q5TZ20 316 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 SLC6A19Q695T7 634 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 PAQR6Q6TCH4 344 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 PXKQ7Z7A4 578 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 SIRT6Q8N6T7 355 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 OR10H4Q8NGA5 316 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 ZNF417Q8TAU3 575 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 DYNC2LI1Q8TCX1 351 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 PSMF1Q92530 271 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 RASD2Q96D21 266 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 TSPAN32Q96QS1 320 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 ZNF587Q96SQ5 575 aaPredicted RBP9.34□□□□□ -0.91
LIG3-203ENST00000585370 PIGQQ9BRB3 760 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 ALG12Q9BV10 488 aa9.34□□□□□ -0.91
LIG3-203ENST00000585370 ALG8Q9BVK2 526 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms