RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 HIF3AQ9Y2N7 669 aa14.23□□□□□ -0.13
ERBB2-222ENST00000584908 MAGED1Q9Y5V3 778 aaPredicted RBP14.23□□□□□ -0.13
ERBB2-222ENST00000584908 ZNF726A6NNF4 738 aa14.22□□□□□ -0.13
ERBB2-222ENST00000584908 CENPBD1B2RD01 187 aa14.22□□□□□ -0.13
ERBB2-222ENST00000584908 BLOC1S5-TXNDC5H3BN57 136 aa14.22□□□□□ -0.13
ERBB2-222ENST00000584908 HS3ST1O14792 307 aa14.22□□□□□ -0.13
ERBB2-222ENST00000584908 WNT11O96014 354 aa14.22□□□□□ -0.13
ERBB2-222ENST00000584908 IFI30P13284 250 aa14.22□□□□□ -0.13
ERBB2-222ENST00000584908 ITGA2P17301 1181 aa14.22□□□□□ -0.13
ERBB2-222ENST00000584908 PTAFRP25105 342 aa14.22□□□□□ -0.13
ERBB2-222ENST00000584908 HOXC12P31275 282 aa14.22□□□□□ -0.13
ERBB2-222ENST00000584908 BIDP55957 195 aa14.22□□□□□ -0.13
ERBB2-222ENST00000584908 PRPS1P60891 318 aa14.22□□□□□ -0.13
ERBB2-222ENST00000584908 FHL1Q13642 323 aa14.22□□□□□ -0.13
ERBB2-222ENST00000584908 KEAP1Q14145 624 aa14.22□□□□□ -0.13
ERBB2-222ENST00000584908 CEACAM16Q2WEN9 425 aa14.22□□□□□ -0.13
ERBB2-222ENST00000584908 HIKESHIQ53FT3 197 aa14.22□□□□□ -0.13
ERBB2-222ENST00000584908 ALKBH2Q6NS38 261 aa14.22□□□□□ -0.13
ERBB2-222ENST00000584908 KLHL17Q6TDP4 642 aa14.22□□□□□ -0.13
ERBB2-222ENST00000584908 SPNS3Q6ZMD2 512 aa14.22□□□□□ -0.13
ERBB2-222ENST00000584908 TMPRSS11FQ6ZWK6 438 aa14.22□□□□□ -0.13
ERBB2-222ENST00000584908 NRMQ8IXM6 262 aa14.22□□□□□ -0.13
ERBB2-222ENST00000584908 ZNF837Q96EG3 531 aaPredicted RBP14.22□□□□□ -0.13
ERBB2-222ENST00000584908 SLC25A44Q96H78 314 aaPredicted RBP14.22□□□□□ -0.13
ERBB2-222ENST00000584908 SEPHS2Q99611 448 aa14.22□□□□□ -0.13
ERBB2-222ENST00000584908 PIP5K1AQ99755 562 aa14.22□□□□□ -0.13
ERBB2-222ENST00000584908 FUZQ9BT04 418 aa14.22□□□□□ -0.13
ERBB2-222ENST00000584908 FAM32AQ9Y421 112 aaKnown RBP14.22□□□□□ -0.13
ERBB2-222ENST00000584908 A0A1W2PR80 420 aa14.21□□□□□ -0.13
ERBB2-222ENST00000584908 ZNF99A8MXY4 864 aaPredicted RBP14.21□□□□□ -0.13
ERBB2-222ENST00000584908 SERPINI2O75830 405 aa14.21□□□□□ -0.13
ERBB2-222ENST00000584908 H1F0P07305 194 aaKnown RBP14.21□□□□□ -0.13
ERBB2-222ENST00000584908 CDH2P19022 906 aaPredicted RBP14.21□□□□□ -0.13
ERBB2-222ENST00000584908 MAKP20794 623 aa14.21□□□□□ -0.13
ERBB2-222ENST00000584908 AQP2P41181 271 aa14.21□□□□□ -0.13
ERBB2-222ENST00000584908 SLC9A3P48764 834 aa14.21□□□□□ -0.13
ERBB2-222ENST00000584908 ARF1P84077 181 aaKnown RBP14.21□□□□□ -0.13
ERBB2-222ENST00000584908 CAMK2DQ13557 499 aa14.21□□□□□ -0.13
ERBB2-222ENST00000584908 TRIM25Q14258 630 aaKnown RBP14.21□□□□□ -0.13
ERBB2-222ENST00000584908 TBPL2Q6SJ96 375 aa14.21□□□□□ -0.13
ERBB2-222ENST00000584908 TMEM108Q6UXF1 575 aa14.21□□□□□ -0.13
ERBB2-222ENST00000584908 ZNF730Q6ZMV8 503 aa14.21□□□□□ -0.13
ERBB2-222ENST00000584908 ZNF611Q8N823 705 aa14.21□□□□□ -0.13
ERBB2-222ENST00000584908 FAM169BQ8N8A8 192 aa14.21□□□□□ -0.13
ERBB2-222ENST00000584908 TMEM54Q969K7 222 aa14.21□□□□□ -0.13
ERBB2-222ENST00000584908 RADILQ96JH8 1075 aa14.21□□□□□ -0.13
ERBB2-222ENST00000584908 MRPL13Q9BYD1 178 aaKnown RBP14.21□□□□□ -0.13
ERBB2-222ENST00000584908 UBTD1Q9HAC8 227 aa14.21□□□□□ -0.13
ERBB2-222ENST00000584908 MOV10Q9HCE1 1003 aaKnown RBP14.21□□□□□ -0.13
ERBB2-222ENST00000584908 IL1RAPQ9NPH3 570 aa14.21□□□□□ -0.13
ERBB2-222ENST00000584908 B3GAT2Q9NPZ5 323 aa14.21□□□□□ -0.13
ERBB2-222ENST00000584908 INIPQ9NRY2 104 aa14.21□□□□□ -0.13
ERBB2-222ENST00000584908 MGAT4BQ9UQ53 548 aa14.21□□□□□ -0.13
ERBB2-222ENST00000584908 ARID1AO14497 2285 aa14.21□□□□□ -0.13
ERBB2-222ENST00000584908 A0A1W2PRG6 482 aa14.2□□□□□ -0.14
ERBB2-222ENST00000584908 SHISA9B4DS77 424 aa14.2□□□□□ -0.14
ERBB2-222ENST00000584908 hCG_2039718K7EN88 272 aa14.2□□□□□ -0.14
ERBB2-222ENST00000584908 M0R3G1 203 aa14.2□□□□□ -0.14
ERBB2-222ENST00000584908 TMCC2O75069 709 aa14.2□□□□□ -0.14
ERBB2-222ENST00000584908 BCL10O95999 233 aa14.2□□□□□ -0.14
ERBB2-222ENST00000584908 PGA4P0DJD7 388 aa14.2□□□□□ -0.14
ERBB2-222ENST00000584908 PGA3P0DJD8 388 aa14.2□□□□□ -0.14
ERBB2-222ENST00000584908 ATP6V1B2P21281 511 aa14.2□□□□□ -0.14
ERBB2-222ENST00000584908 CD40P25942 277 aa14.2□□□□□ -0.14
ERBB2-222ENST00000584908 CSNK1A1P48729 337 aa14.2□□□□□ -0.14
ERBB2-222ENST00000584908 FOXD4Q12950 439 aaPredicted RBP14.2□□□□□ -0.14
ERBB2-222ENST00000584908 TAF11Q15544 211 aa14.2□□□□□ -0.14
ERBB2-222ENST00000584908 HIST3H3Q16695 136 aa14.2□□□□□ -0.14
ERBB2-222ENST00000584908 DEFB113Q30KQ7 82 aa14.2□□□□□ -0.14
ERBB2-222ENST00000584908 C3orf36Q3SXR2 165 aa14.2□□□□□ -0.14
ERBB2-222ENST00000584908 ZNF672Q499Z4 452 aaPredicted RBP14.2□□□□□ -0.14
ERBB2-222ENST00000584908 CARD17Q5XLA6 110 aa14.2□□□□□ -0.14
ERBB2-222ENST00000584908 LCN8Q6JVE9 175 aa14.2□□□□□ -0.14
ERBB2-222ENST00000584908 PODNL1Q6PEZ8 512 aa14.2□□□□□ -0.14
ERBB2-222ENST00000584908 KLHL24Q6TFL4 600 aa14.2□□□□□ -0.14
ERBB2-222ENST00000584908 PIWIL3Q7Z3Z3 882 aaKnown RBP14.2□□□□□ -0.14
ERBB2-222ENST00000584908 HDDC2Q7Z4H3 204 aa14.2□□□□□ -0.14
ERBB2-222ENST00000584908 CCDC36Q8IYA8 594 aa14.2□□□□□ -0.14
ERBB2-222ENST00000584908 MOSPD2Q8NHP6 518 aa14.2□□□□□ -0.14
ERBB2-222ENST00000584908 AKAP1Q92667 903 aaKnown RBP eCLIP14.2□□□□□ -0.14
ERBB2-222ENST00000584908 POP5Q969H6 163 aaKnown RBP14.2□□□□□ -0.14
ERBB2-222ENST00000584908 PIGTQ969N2 578 aa14.2□□□□□ -0.14
ERBB2-222ENST00000584908 ZNF566Q969W8 418 aa14.2□□□□□ -0.14
ERBB2-222ENST00000584908 BEX4Q9NWD9 120 aaPredicted RBP14.2□□□□□ -0.14
ERBB2-222ENST00000584908 GLTPQ9NZD2 209 aa14.2□□□□□ -0.14
ERBB2-222ENST00000584908 CRNNQ9UBG3 495 aaPredicted RBP14.2□□□□□ -0.14
ERBB2-222ENST00000584908 TMEM5Q9Y2B1 443 aa14.2□□□□□ -0.14
ERBB2-222ENST00000584908 F8P00451 2351 aa14.2□□□□□ -0.14
ERBB2-222ENST00000584908 TCRBV5S2A0A599 114 aa14.19□□□□□ -0.14
ERBB2-222ENST00000584908 ABCD4O14678 606 aa14.19□□□□□ -0.14
ERBB2-222ENST00000584908 CLOCKO15516 846 aa14.19□□□□□ -0.14
ERBB2-222ENST00000584908 UBOX5O94941 541 aa14.19□□□□□ -0.14
ERBB2-222ENST00000584908 IGHMP01871 453 aa14.19□□□□□ -0.14
ERBB2-222ENST00000584908 F13BP05160 661 aa14.19□□□□□ -0.14
ERBB2-222ENST00000584908 SAGP10523 405 aaPredicted RBP14.19□□□□□ -0.14
ERBB2-222ENST00000584908 MAGEA2P43356 314 aa14.19□□□□□ -0.14
ERBB2-222ENST00000584908 DAP3P51398 398 aaKnown RBP14.19□□□□□ -0.14
ERBB2-222ENST00000584908 ZNF83P51522 516 aa14.19□□□□□ -0.14
ERBB2-222ENST00000584908 ART1P52961 327 aa14.19□□□□□ -0.14
ERBB2-222ENST00000584908 SMIM11AP58511 58 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms