RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 MFSD11O43934 449 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 PSIP1O75475 530 aaKnown RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 NXPH2O95156 264 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC25A14O95258 325 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 NPPAP01160 153 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 PNMTP11086 282 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC2A2P11168 524 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ANXA3P12429 323 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 NR2C1P13056 603 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CD59P13987 128 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ITGA2P17301 1181 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 UGT1A4P22310 534 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 OTX2P32243 289 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 UGT1A3P35503 534 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 UGT1A5P35504 534 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CAPZBP47756 277 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 OR3A1P47881 315 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 TNFSF10P50591 281 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 MAZP56270 477 aaKnown RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 RPS24P62847 133 aaKnown RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF155Q12901 538 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 HNF4GQ14541 408 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 EXOSC7Q15024 291 aaKnown RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 MAPRE2Q15555 327 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 HLA-BQ31612 363 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF585BQ52M93 769 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 PRAMEF5Q5TYX0 476 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 AGBL2Q5U5Z8 902 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 PRAMEF6Q5VXH4 476 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 UGT2A3Q6UWM9 527 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 APOOLQ6UXV4 268 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 DPPA2Q7Z7J5 298 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 MMAAQ8IVH4 418 aaKnown RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 PARP8Q8N3A8 854 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 OR9A1PQ8NGU1 263 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 OR5K2Q8NHB8 316 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 M1APQ8TC57 530 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 EFHD2Q96C19 240 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 BIRC7Q96CA5 298 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF479Q96JC4 524 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 RNF145Q96MT1 663 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 TAAR6Q96RI8 345 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 NPAS2Q99743 824 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CITED1Q99966 193 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 PIGQQ9BRB3 760 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 HOXD1Q9GZZ0 328 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ARMC7Q9H6L4 198 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 PARVBQ9HBI1 364 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 TREX1Q9NSU2 369 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 FBXO5Q9UKT4 447 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CA5BQ9Y2D0 317 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 OARD1Q9Y530 152 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 IGHV4OR15-8A0A075B7B6 117 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC5A10A0PJK1 596 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 SH2D1BO14796 132 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CIDEAO60543 219 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CDK14O94921 469 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 SCELO95171 688 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 HPP00738 406 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 KRT6AP02538 564 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 HLA-DQB2P05538 268 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CRHP06850 196 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 SNRPAP09012 282 aaKnown RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC35G6P0C7Q6 338 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ADORA3P0DMS8 318 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 H2AFXP16104 143 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 HIST1H1TP22492 207 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 RPA3P35244 121 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 RGS8P57771 180 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 GNG11P61952 73 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 GUCY2DQ02846 1103 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 COX10Q12887 443 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 FZD2Q14332 565 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CDKN3Q16667 212 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 WLSQ5T9L3 541 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CYP4V2Q6ZWL3 525 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 EGFL6Q8IUX8 553 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 PLD3Q8IV08 490 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CCDC36Q8IYA8 594 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF440Q8IYI8 595 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF567Q8N184 647 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ZCCHC7Q8N3Z6 543 aaKnown RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 TMEM99Q8N816 258 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 WDSUB1Q8N9V3 476 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF383Q8NA42 475 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 MORN4Q8NDC4 146 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 PLPP5Q8NEB5 264 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 PYROXD1Q8WU10 500 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ART4Q93070 314 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 TMEM45BQ96B21 275 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 DOCK6Q96HP0 2047 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CLCC1Q96S66 551 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 MRPL57Q9BQC6 102 aaKnown RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 LINC00597Q9H2U6 94 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ASB8Q9H765 288 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC2A8Q9NY64 477 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CALML5Q9NZT1 146 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ASIC3Q9UHC3 531 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 DIMT1Q9UNQ2 313 aaKnown RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ANKRD36A6QL64 1941 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms