RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 TTYH1Q9H313 450 aaPredicted RBP10.28□□□□□ -0.76
TOP3A-217ENST00000584582 RBFOX1Q9NWB1 397 aaKnown RBP10.28□□□□□ -0.76
TOP3A-217ENST00000584582 KLHL9Q9P2J3 617 aa10.28□□□□□ -0.76
TOP3A-217ENST00000584582 CGGBP1Q9UFW8 167 aaPredicted RBP10.28□□□□□ -0.76
TOP3A-217ENST00000584582 PCDHGB2Q9Y5G2 931 aa10.28□□□□□ -0.76
TOP3A-217ENST00000584582 CACNG2Q9Y698 323 aa10.28□□□□□ -0.76
TOP3A-217ENST00000584582 V9GY05 133 aa10.28□□□□□ -0.76
TOP3A-217ENST00000584582 KIF26BQ2KJY2 2108 aa10.28□□□□□ -0.76
TOP3A-217ENST00000584582 VSTM2BA6NLU5 285 aa10.28□□□□□ -0.76
TOP3A-217ENST00000584582 LAMTOR5O43504 91 aa10.28□□□□□ -0.76
TOP3A-217ENST00000584582 ZFPL1O95159 310 aa10.28□□□□□ -0.76
TOP3A-217ENST00000584582 GTF2F2P13984 249 aa10.28□□□□□ -0.76
TOP3A-217ENST00000584582 SRMP19623 302 aa10.28□□□□□ -0.76
TOP3A-217ENST00000584582 HSD11B1P28845 292 aa10.28□□□□□ -0.76
TOP3A-217ENST00000584582 MGAT2Q10469 447 aa10.28□□□□□ -0.76
TOP3A-217ENST00000584582 SMAD4Q13485 552 aaKnown RBP10.28□□□□□ -0.76
TOP3A-217ENST00000584582 ELAVL1Q15717 326 aaKnown RBP10.28□□□□□ -0.76
TOP3A-217ENST00000584582 INPP5JQ15735 1006 aaPredicted RBP10.28□□□□□ -0.76
TOP3A-217ENST00000584582 ZNF440Q8IYI8 595 aa10.28□□□□□ -0.76
TOP3A-217ENST00000584582 PTPMT1Q8WUK0 201 aaPredicted RBP10.28□□□□□ -0.76
TOP3A-217ENST00000584582 SCARF2Q96GP6 870 aaPredicted RBP10.28□□□□□ -0.76
TOP3A-217ENST00000584582 KLHL15Q96M94 604 aa10.28□□□□□ -0.76
TOP3A-217ENST00000584582 ABHD1Q96SE0 405 aa10.28□□□□□ -0.76
TOP3A-217ENST00000584582 HOXD1Q9GZZ0 328 aa10.28□□□□□ -0.76
TOP3A-217ENST00000584582 FBXL3Q9UKT7 428 aa10.28□□□□□ -0.76
TOP3A-217ENST00000584582 DHDHQ9UQ10 334 aa10.28□□□□□ -0.76
TOP3A-217ENST00000584582 EMC9Q9Y3B6 208 aa10.28□□□□□ -0.76
TOP3A-217ENST00000584582 NOTOA8MTQ0 251 aa10.28□□□□□ -0.76
TOP3A-217ENST00000584582 KRT33AO76009 404 aa10.28□□□□□ -0.76
TOP3A-217ENST00000584582 S1PR1P21453 382 aa10.28□□□□□ -0.76
TOP3A-217ENST00000584582 DIO1P49895 249 aa10.28□□□□□ -0.76
TOP3A-217ENST00000584582 FCN2Q15485 313 aa10.28□□□□□ -0.76
TOP3A-217ENST00000584582 PRTGQ2VWP7 1150 aa10.28□□□□□ -0.76
TOP3A-217ENST00000584582 TMEM176BQ3YBM2 270 aaPredicted RBP10.28□□□□□ -0.76
TOP3A-217ENST00000584582 ZNF431Q8TF32 576 aaPredicted RBP10.28□□□□□ -0.76
TOP3A-217ENST00000584582 AKAP1Q92667 903 aaKnown RBP eCLIP10.28□□□□□ -0.765e-7■■■■□ 21.1
TOP3A-217ENST00000584582 ZNF764Q96H86 408 aaPredicted RBP10.28□□□□□ -0.76
TOP3A-217ENST00000584582 FAM71F1Q96KD3 344 aaPredicted RBP10.28□□□□□ -0.76
TOP3A-217ENST00000584582 RBP7Q96R05 134 aa10.28□□□□□ -0.76
TOP3A-217ENST00000584582 PDCD10Q9BUL8 212 aa10.28□□□□□ -0.76
TOP3A-217ENST00000584582 KLK11Q9UBX7 282 aa10.28□□□□□ -0.76
TOP3A-217ENST00000584582 ZNF281Q9Y2X9 895 aa10.28□□□□□ -0.76
TOP3A-217ENST00000584582 ARPC1BO15143 372 aaKnown RBP10.27□□□□□ -0.76
TOP3A-217ENST00000584582 HOXC4P09017 264 aaPredicted RBP10.27□□□□□ -0.76
TOP3A-217ENST00000584582 IFNGR1P15260 489 aa10.27□□□□□ -0.76
TOP3A-217ENST00000584582 STOMP27105 288 aa10.27□□□□□ -0.76
TOP3A-217ENST00000584582 HOXD12P35452 270 aa10.27□□□□□ -0.76
TOP3A-217ENST00000584582 UBE2MP61081 183 aaKnown RBP10.27□□□□□ -0.76
TOP3A-217ENST00000584582 PITPNAQ00169 270 aa10.27□□□□□ -0.76
TOP3A-217ENST00000584582 NDUFAF7Q7L592 441 aa10.27□□□□□ -0.76
TOP3A-217ENST00000584582 PPP1R3BQ86XI6 285 aa10.27□□□□□ -0.76
TOP3A-217ENST00000584582 FCAMRQ8WWV6 532 aa10.27□□□□□ -0.76
TOP3A-217ENST00000584582 TMEM234Q8WY98 164 aa10.27□□□□□ -0.76
TOP3A-217ENST00000584582 SARGQ9BW04 601 aa10.27□□□□□ -0.76
TOP3A-217ENST00000584582 DIABLOQ9NR28 239 aa10.27□□□□□ -0.76
TOP3A-217ENST00000584582 NPFFR2Q9Y5X5 522 aa10.27□□□□□ -0.76
TOP3A-217ENST00000584582 SPTAN1Q13813 2472 aaKnown RBP10.27□□□□□ -0.77
TOP3A-217ENST00000584582 FANCMQ8IYD8 2048 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 TEX46H3BTG2 121 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 UCHL1P09936 223 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 H2AFB2P0C5Z0 115 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 ARSBP15848 533 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 RFX2P48378 723 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 PTH2RP49190 550 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 MTNR1BP49286 362 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 RIDAP52758 137 aaKnown RBP10.27□□□□□ -0.77
TOP3A-217ENST00000584582 CBFBQ13951 182 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 CDK5R1Q15078 307 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 PYHIN1Q6K0P9 492 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 OR2AJ1Q8NGZ0 328 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 ACOT12Q8WYK0 555 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 TXNDC15Q96J42 360 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 VSX1Q9NZR4 365 aaPredicted RBP10.27□□□□□ -0.77
TOP3A-217ENST00000584582 KLHL13Q9P2N7 655 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 POLHQ9Y253 713 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 FREM3P0C091 2139 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 AKR7A2O43488 359 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 TRIM3O75382 744 aaPredicted RBP10.27□□□□□ -0.77
TOP3A-217ENST00000584582 OR2J2O76002 312 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 CCNOP22674 350 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 GDNFP39905 211 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 ART1P52961 327 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 CLRN1P58418 232 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 GPR85P60893 370 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 FHL5Q5TD97 284 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 C1orf140Q5VVS0 124 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 RPL22L1Q6P5R6 122 aaKnown RBP10.27□□□□□ -0.77
TOP3A-217ENST00000584582 NOXA1Q86UR1 476 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 ARL5BQ96KC2 179 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 ZNF578Q96N58 590 aaPredicted RBP10.27□□□□□ -0.77
TOP3A-217ENST00000584582 SDHCQ99643 169 aaPredicted RBP10.27□□□□□ -0.77
TOP3A-217ENST00000584582 MMP25Q9NPA2 562 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 SERINC1Q9NRX5 453 aa10.27□□□□□ -0.77
TOP3A-217ENST00000584582 PLA2G10O15496 165 aa10.26□□□□□ -0.77
TOP3A-217ENST00000584582 GLCEO94923 617 aa10.26□□□□□ -0.77
TOP3A-217ENST00000584582 PDGFBP01127 241 aaPredicted RBP10.26□□□□□ -0.77
TOP3A-217ENST00000584582 HLA-DMAP28067 261 aa10.26□□□□□ -0.77
TOP3A-217ENST00000584582 ETV6P41212 452 aa10.26□□□□□ -0.77
TOP3A-217ENST00000584582 SF3A2Q15428 464 aaKnown RBP10.26□□□□□ -0.77
TOP3A-217ENST00000584582 ZNF74Q16587 644 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms