RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 DCDC2Q9UHG0 476 aa9.41□□□□□ -0.9
CASC3-208ENST00000583649 NPTNQ9Y639 398 aa9.41□□□□□ -0.9
CASC3-208ENST00000583649 WNK2Q9Y3S1 2297 aa9.41□□□□□ -0.9
CASC3-208ENST00000583649 PRAMEF27A3QJZ7 478 aa9.4□□□□□ -0.9
CASC3-208ENST00000583649 G3V4G9 280 aa9.4□□□□□ -0.9
CASC3-208ENST00000583649 AIM2O14862 343 aa9.4□□□□□ -0.9
CASC3-208ENST00000583649 AZIN1O14977 448 aa9.4□□□□□ -0.9
CASC3-208ENST00000583649 LSM1O15116 133 aaKnown RBP9.4□□□□□ -0.9
CASC3-208ENST00000583649 FRS3O43559 492 aa9.4□□□□□ -0.9
CASC3-208ENST00000583649 OR2T1O43869 369 aa9.4□□□□□ -0.9
CASC3-208ENST00000583649 FARS2O95363 451 aaKnown RBP9.4□□□□□ -0.9
CASC3-208ENST00000583649 OPN1MWP04001 364 aa9.4□□□□□ -0.9
CASC3-208ENST00000583649 LINC00032P0C843 101 aa9.4□□□□□ -0.9
CASC3-208ENST00000583649 FAM157BP0CG42 384 aa9.4□□□□□ -0.9
CASC3-208ENST00000583649 OPN1MW2P0DN77 364 aa9.4□□□□□ -0.9
CASC3-208ENST00000583649 OPN1MW3P0DN78 364 aa9.4□□□□□ -0.9
CASC3-208ENST00000583649 OR12D1P0DN82 309 aa9.4□□□□□ -0.9
CASC3-208ENST00000583649 NCF2P19878 526 aaPredicted RBP9.4□□□□□ -0.9
CASC3-208ENST00000583649 SLC6A9P48067 706 aa9.4□□□□□ -0.9
CASC3-208ENST00000583649 P2RY4P51582 365 aa9.4□□□□□ -0.9
CASC3-208ENST00000583649 HBA1P69905 142 aa9.4□□□□□ -0.9
CASC3-208ENST00000583649 PLP2Q04941 152 aa9.4□□□□□ -0.9
CASC3-208ENST00000583649 TMEM155Q4W5P6 130 aa9.4□□□□□ -0.9
CASC3-208ENST00000583649 GPR157Q5UAW9 335 aa9.4□□□□□ -0.9
CASC3-208ENST00000583649 CLEC6AQ6EIG7 209 aa9.4□□□□□ -0.9
CASC3-208ENST00000583649 NOA1Q8NC60 698 aaKnown RBP9.4□□□□□ -0.9
CASC3-208ENST00000583649 SLC30A7Q8NEW0 376 aa9.4□□□□□ -0.9
CASC3-208ENST00000583649 MIPOL1Q8TD10 442 aa9.4□□□□□ -0.9
CASC3-208ENST00000583649 SSMEM1Q8WWF3 244 aa9.4□□□□□ -0.9
CASC3-208ENST00000583649 CNOT9Q92600 299 aaKnown RBP9.4□□□□□ -0.9
CASC3-208ENST00000583649 UPRTQ96BW1 309 aa9.4□□□□□ -0.9
CASC3-208ENST00000583649 COQ8BQ96D53 544 aa9.4□□□□□ -0.9
CASC3-208ENST00000583649 KTI12Q96EK9 354 aaPredicted RBP9.4□□□□□ -0.9
CASC3-208ENST00000583649 PLEKHA8Q96JA3 519 aa9.4□□□□□ -0.9
CASC3-208ENST00000583649 FUT8Q9BYC5 575 aa9.4□□□□□ -0.9
CASC3-208ENST00000583649 MTHFD2LQ9H903 347 aaPredicted RBP9.4□□□□□ -0.9
CASC3-208ENST00000583649 PATZ1Q9HBE1 687 aaKnown RBP9.4□□□□□ -0.9
CASC3-208ENST00000583649 ZDHHC8Q9ULC8 765 aa9.4□□□□□ -0.9
CASC3-208ENST00000583649 LRCH1Q9Y2L9 728 aa9.4□□□□□ -0.9
CASC3-208ENST00000583649 FIS1Q9Y3D6 152 aa9.4□□□□□ -0.9
CASC3-208ENST00000583649 IGHV3OR16-10A0A075B7F0 116 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 TRAV40A0A0B4J280 105 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 ZNF726A6NNF4 738 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 A8MXK9 166 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 TRAPPC2LH3BP13 241 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 SPRY3O43610 288 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 BCAS1O75363 584 aaPredicted RBP9.39□□□□□ -0.91
CASC3-208ENST00000583649 CLPTM1O96005 669 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 PLATP00750 562 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 DBIP07108 87 aaKnown RBP9.39□□□□□ -0.91
CASC3-208ENST00000583649 OR8G3PP0DMU2 310 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 IGHV4-38-2P0DP08 117 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 PNMTP11086 282 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 B4GALT1P15291 398 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 TNFSF4P23510 183 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 UCP2P55851 309 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 GNG11P61952 73 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 TXNL4AP83876 142 aaKnown RBP9.39□□□□□ -0.91
CASC3-208ENST00000583649 PAX8Q06710 450 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 EPS8Q12929 822 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 PMS2P3Q13401 168 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 RAB39AQ14964 217 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 DEFB112Q30KQ8 113 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 TMEM53Q6P2H8 277 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 C5orf46Q6UWT4 87 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 ZYG11AQ6WRX3 759 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 Q6YL49 198 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 FRRS1Q6ZNA5 592 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 TIFABQ6ZNK6 161 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 VASH1Q7L8A9 365 aaPredicted RBP9.39□□□□□ -0.91
CASC3-208ENST00000583649 ZNF627Q7L945 461 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 PIWIL3Q7Z3Z3 882 aaKnown RBP9.39□□□□□ -0.91
CASC3-208ENST00000583649 RNF130Q86XS8 419 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 RELL1Q8IUW5 271 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 UEVLDQ8IX04 471 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 PEX5LQ8IYB4 626 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 C1orf174Q8IYL3 243 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 MUC20Q8N307 709 aaPredicted RBP9.39□□□□□ -0.91
CASC3-208ENST00000583649 KDM8Q8N371 416 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 SPATA4Q8NEY3 305 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 OR10S1Q8NGN2 331 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 OR6N1Q8NGY5 312 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 ACMSDQ8TDX5 336 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 SGCDQ92629 289 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 NEURL3Q96EH8 262 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 OR2M2Q96R28 347 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 FOXB1Q99853 325 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 MECRQ9BV79 373 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 ULBP2Q9BZM5 246 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 CHIAQ9BZP6 476 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 PRDM13Q9H4Q3 707 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 RNF121Q9H920 327 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 MARCH7Q9H992 704 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 A4GALTQ9NPC4 353 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 NECAP2Q9NVZ3 263 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 NINJ2Q9NZG7 142 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.39□□□□□ -0.91
CASC3-208ENST00000583649 EGFL7Q9UHF1 273 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 CACNG2Q9Y698 323 aa9.39□□□□□ -0.91
CASC3-208ENST00000583649 A0A087WUV0 522 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms