RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 COQ5Q5HYK3 327 aa10.56□□□□□ -0.72
TOP3A-215ENST00000583328 PAGE3Q5JUK9 113 aa10.56□□□□□ -0.72
TOP3A-215ENST00000583328 C1QL2Q7Z5L3 287 aa10.56□□□□□ -0.72
TOP3A-215ENST00000583328 SNX32Q86XE0 403 aa10.56□□□□□ -0.72
TOP3A-215ENST00000583328 CCDC36Q8IYA8 594 aa10.56□□□□□ -0.72
TOP3A-215ENST00000583328 KDM8Q8N371 416 aa10.56□□□□□ -0.72
TOP3A-215ENST00000583328 GPR137CQ8N3F9 429 aa10.56□□□□□ -0.72
TOP3A-215ENST00000583328 DPP10Q8N608 796 aa10.56□□□□□ -0.72
TOP3A-215ENST00000583328 ANKK1Q8NFD2 765 aa10.56□□□□□ -0.72
TOP3A-215ENST00000583328 NANPQ8TBE9 248 aa10.56□□□□□ -0.72
TOP3A-215ENST00000583328 ZNF416Q9BWM5 594 aa10.56□□□□□ -0.72
TOP3A-215ENST00000583328 TMPRSS13Q9BYE2 586 aa10.56□□□□□ -0.72
TOP3A-215ENST00000583328 PAIP1Q9H074 479 aaKnown RBP10.56□□□□□ -0.72
TOP3A-215ENST00000583328 GPR35Q9HC97 309 aa10.56□□□□□ -0.72
TOP3A-215ENST00000583328 SLC6A13Q9NSD5 602 aa10.56□□□□□ -0.72
TOP3A-215ENST00000583328 PPIAL4AQ9Y536 164 aa10.56□□□□□ -0.72
TOP3A-215ENST00000583328 A0A0G2JMP0 313 aa10.55□□□□□ -0.72
TOP3A-215ENST00000583328 A0A0X1KG70 313 aa10.55□□□□□ -0.72
TOP3A-215ENST00000583328 PRAMEF27A3QJZ7 478 aa10.55□□□□□ -0.72
TOP3A-215ENST00000583328 ZNF503-AS2A6NEH8 195 aa10.55□□□□□ -0.72
TOP3A-215ENST00000583328 AGAP5A6NIR3 686 aa10.55□□□□□ -0.72
TOP3A-215ENST00000583328 NDUFAB1O14561 156 aa10.55□□□□□ -0.72
TOP3A-215ENST00000583328 SLC43A1O75387 559 aa10.55□□□□□ -0.72
TOP3A-215ENST00000583328 HKR1P10072 659 aa10.55□□□□□ -0.72
TOP3A-215ENST00000583328 CD79AP11912 226 aa10.55□□□□□ -0.72
TOP3A-215ENST00000583328 ZNF43P17038 809 aa10.55□□□□□ -0.72
TOP3A-215ENST00000583328 HOXB9P17482 250 aaPredicted RBP10.55□□□□□ -0.72
TOP3A-215ENST00000583328 ADRA2CP18825 462 aa10.55□□□□□ -0.72
TOP3A-215ENST00000583328 FPR2P25090 351 aa10.55□□□□□ -0.72
TOP3A-215ENST00000583328 GLRXP35754 106 aa10.55□□□□□ -0.72
TOP3A-215ENST00000583328 ANXA11P50995 505 aaKnown RBP10.55□□□□□ -0.72
TOP3A-215ENST00000583328 MRPS11P82912 194 aaKnown RBP10.55□□□□□ -0.72
TOP3A-215ENST00000583328 MAD2L1BPQ15013 274 aaPredicted RBP10.55□□□□□ -0.72
TOP3A-215ENST00000583328 CEACAM16Q2WEN9 425 aa10.55□□□□□ -0.72
TOP3A-215ENST00000583328 TRMT5Q32P41 509 aaKnown RBP10.55□□□□□ -0.72
TOP3A-215ENST00000583328 MRPL2Q5T653 305 aaKnown RBP10.55□□□□□ -0.72
TOP3A-215ENST00000583328 C1orf140Q5VVS0 124 aa10.55□□□□□ -0.72
TOP3A-215ENST00000583328 DHDDSQ86SQ9 333 aa10.55□□□□□ -0.72
TOP3A-215ENST00000583328 RETREG3Q86VR2 466 aa10.55□□□□□ -0.72
TOP3A-215ENST00000583328 LRP11Q86VZ4 500 aa10.55□□□□□ -0.72
TOP3A-215ENST00000583328 ZNF440Q8IYI8 595 aa10.55□□□□□ -0.72
TOP3A-215ENST00000583328 CADM2Q8N3J6 435 aa10.55□□□□□ -0.72
TOP3A-215ENST00000583328 LRRC17Q8N6Y2 441 aa10.55□□□□□ -0.72
TOP3A-215ENST00000583328 ANKFN1Q8N957 763 aa10.55□□□□□ -0.72
TOP3A-215ENST00000583328 CCDC197Q8NCU1 140 aa10.55□□□□□ -0.72
TOP3A-215ENST00000583328 OR4M2Q8NGB6 313 aa10.55□□□□□ -0.72
TOP3A-215ENST00000583328 RP9Q8TA86 221 aaKnown RBP10.55□□□□□ -0.72
TOP3A-215ENST00000583328 ZNF665Q9H7R5 613 aa10.55□□□□□ -0.72
TOP3A-215ENST00000583328 MTHFD2LQ9H903 347 aaPredicted RBP10.55□□□□□ -0.72
TOP3A-215ENST00000583328 TPT1P8Q9HAU6 139 aa10.55□□□□□ -0.72
TOP3A-215ENST00000583328 NTN4Q9HB63 628 aa10.55□□□□□ -0.72
TOP3A-215ENST00000583328 FZR1Q9UM11 496 aa10.55□□□□□ -0.72
TOP3A-215ENST00000583328 TRBV5-3A0A0A0MS03 114 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 FBP2O00757 339 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 FRS3O43559 492 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 PLPP2O43688 288 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 SEC14L2O76054 403 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 ZNF432O94892 652 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 TFPTP0C1Z6 253 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 GKN3PP0CG01 181 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 ARAFP10398 606 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 COX4I1P13073 169 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 PPIBP23284 216 aaKnown RBP10.54□□□□□ -0.72
TOP3A-215ENST00000583328 COPZ1P61923 177 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 MVKQ03426 396 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 C1DQ13901 141 aaKnown RBP10.54□□□□□ -0.72
TOP3A-215ENST00000583328 NFYCQ13952 458 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 CYLC2Q14093 348 aaPredicted RBP10.54□□□□□ -0.72
TOP3A-215ENST00000583328 SYPL1Q16563 259 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 MMEL1Q495T6 779 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 GTDC1Q4AE62 458 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 FAM91A1Q658Y4 838 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 DLEU7Q6UYE1 221 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 LRRC74BQ6ZQY2 392 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 RNF130Q86XS8 419 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 TREML1Q86YW5 311 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 PCYOX1LQ8NBM8 494 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 BCAS4Q8TDM0 211 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 C22orf15Q8WYQ4 148 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 SLC25A36Q96CQ1 311 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 ZNF837Q96EG3 531 aaPredicted RBP10.54□□□□□ -0.72
TOP3A-215ENST00000583328 MS4A3Q96HJ5 214 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 TRNT1Q96Q11 434 aaKnown RBP10.54□□□□□ -0.72
TOP3A-215ENST00000583328 SLC38A1Q9H2H9 487 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 RAD21L1Q9H4I0 556 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 SLC25A37Q9NYZ2 338 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 SLAMF8Q9P0V8 285 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 DUSP13Q9UII6 198 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 RCE1Q9Y256 329 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 CORINQ9Y5Q5 1042 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 GMEB1Q9Y692 573 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 TGP01266 2768 aa10.54□□□□□ -0.72
TOP3A-215ENST00000583328 LOC100653049A0A140TA62 436 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 A0A1W2PPW3 197 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 J3QLI3 93 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 CLIC1O00299 241 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 HMGN4O00479 90 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 MRASO14807 208 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 CDC14BO60729 498 aa10.53□□□□□ -0.72
TOP3A-215ENST00000583328 KRT34O76011 436 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms