RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 ASB5Q8WWX0 329 aa9.23□□□□□ -0.93
CCDC47-203ENST00000580986 INTS12Q96CB8 462 aaKnown RBP9.23□□□□□ -0.93
CCDC47-203ENST00000580986 LINC00470Q9BZP3 86 aa9.23□□□□□ -0.93
CCDC47-203ENST00000580986 VCXQ9H320 206 aa9.23□□□□□ -0.93
CCDC47-203ENST00000580986 VCX3BQ9H321 246 aa9.23□□□□□ -0.93
CCDC47-203ENST00000580986 SLC25A19Q9HC21 320 aa9.23□□□□□ -0.93
CCDC47-203ENST00000580986 PLSCR4Q9NRQ2 329 aa9.23□□□□□ -0.93
CCDC47-203ENST00000580986 COQ3Q9NZJ6 369 aa9.23□□□□□ -0.93
CCDC47-203ENST00000580986 Q9UFV3 132 aa9.23□□□□□ -0.93
CCDC47-203ENST00000580986 NOSIPQ9Y314 301 aaKnown RBP9.23□□□□□ -0.93
CCDC47-203ENST00000580986 ORC6Q9Y5N6 252 aa9.23□□□□□ -0.93
CCDC47-203ENST00000580986 NBASA2RRP1 2371 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 E9PQ18 207 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 C11orf98E9PRG8 122 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 PDLIM1O00151 329 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 SOCS2O14508 198 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 DVL2O14641 736 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 MSTNO14793 375 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 LRRTM2O43300 516 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 MRPL33O75394 65 aaKnown RBP9.22□□□□□ -0.93
CCDC47-203ENST00000580986 BCL10O95999 233 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 CGAP01215 116 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 HLA-DOBP13765 273 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 PEX2P28328 305 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 RPL4P36578 427 aaKnown RBP9.22□□□□□ -0.93
CCDC47-203ENST00000580986 ZNF133P52736 654 aaPredicted RBP9.22□□□□□ -0.93
CCDC47-203ENST00000580986 SMSP52788 366 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 CTXN1P60606 82 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 ADORA2A-AS1P86434 159 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 CDK5Q00535 292 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 ACKR1Q16570 336 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 HIST3H3Q16695 136 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 SLC25A35Q3KQZ1 300 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 FBXL19-AS1Q494R0 122 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 SLC36A3Q495N2 470 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 C1QTNF12Q5T7M4 302 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 SLC27A4Q6P1M0 643 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 XKRXQ6PP77 449 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 SLC35D2Q76EJ3 337 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 MRGPRGQ86SM5 289 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 MEX3DQ86XN8 651 aaKnown RBP9.22□□□□□ -0.93
CCDC47-203ENST00000580986 TMEM123Q8N131 208 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 ARIH2OSQ8N7S6 290 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 POMGNT2Q8NAT1 580 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 PRR7Q8TB68 274 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 ASB10Q8WXI3 467 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 SLC25A44Q96H78 314 aaPredicted RBP9.22□□□□□ -0.93
CCDC47-203ENST00000580986 CCDC120Q96HB5 630 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 SAMD8Q96LT4 415 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 ZNF385AQ96PM9 386 aaKnown RBP9.22□□□□□ -0.93
CCDC47-203ENST00000580986 ALG12Q9BV10 488 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 KATNB1Q9BVA0 655 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 TEX12Q9BXU0 123 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 POLDIP3Q9BY77 421 aaKnown RBP9.22□□□□□ -0.93
CCDC47-203ENST00000580986 MRPL13Q9BYD1 178 aaKnown RBP9.22□□□□□ -0.93
CCDC47-203ENST00000580986 PRRG3Q9BZD7 231 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 SMURF2Q9HAU4 748 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 TBC1D23Q9NUY8 699 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 JKAMPQ9P055 326 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 NKX1-2Q9UD57 310 aaPredicted RBP9.22□□□□□ -0.93
CCDC47-203ENST00000580986 MALT1Q9UDY8 824 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 FOXD3Q9UJU5 478 aaPredicted RBP9.22□□□□□ -0.93
CCDC47-203ENST00000580986 HIVEP3Q5T1R4 2406 aa9.22□□□□□ -0.93
CCDC47-203ENST00000580986 CLEC18AA5D8T8 446 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 WIPF3A6NGB9 483 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 ZAR1LA6NP61 321 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 RPL36A-HNRNPH2H7BZ11 118 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 IGHG1P01857 330 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 F13BP05160 661 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 PGA4P0DJD7 388 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 PGA3P0DJD8 388 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 PLA2G2AP14555 144 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 IFNGR1P15260 489 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 GRK5P34947 590 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 GIPRP48546 466 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 CRISP1P54107 249 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 CLDN17P56750 224 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 NPRL3Q12980 569 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 CLEC18BQ6UXF7 455 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 TFAP2EQ6VUC0 442 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 AAED1Q7RTV5 226 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 ABHD12BQ7Z5M8 362 aaPredicted RBP9.21□□□□□ -0.94
CCDC47-203ENST00000580986 FJX1Q86VR8 437 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 GCNT2Q8N0V5 402 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 KDM8Q8N371 416 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 ZNF808Q8N4W9 903 aaPredicted RBP9.21□□□□□ -0.94
CCDC47-203ENST00000580986 CLEC18CQ8NCF0 446 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 OR8D4Q8NGM9 314 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 MAGEE2Q8TD90 523 aaPredicted RBP9.21□□□□□ -0.94
CCDC47-203ENST00000580986 APH1AQ96BI3 265 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 STARD4Q96DR4 205 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 BOD1Q96IK1 185 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 ZNF570Q96NI8 536 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 TSPAN32Q96QS1 320 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 OR2M2Q96R28 347 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 SLC29A1Q99808 456 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 TSSK6Q9BXA6 273 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 PLA2G12AQ9BZM1 189 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 GRIP2Q9C0E4 1043 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 ENKD1Q9H0I2 346 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms