RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 ZNF566Q969W8 418 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 APH1AQ96BI3 265 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 PLEKHA8Q96JA3 519 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 ZNF570Q96NI8 536 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 RBP7Q96R05 134 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 SLC29A1Q99808 456 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 GABARAPL3Q9BY60 117 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 RIBC2Q9H4K1 309 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 PLSCR4Q9NRQ2 329 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 UPB1Q9UBR1 384 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 TMEFF2Q9UIK5 374 aaPredicted RBP12.69□□□□□ -0.38
SKA2-205ENST00000580541 KLHL21Q9UJP4 597 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 ZNF346Q9UL40 294 aaKnown RBP12.69□□□□□ -0.38
SKA2-205ENST00000580541 CLEC4AQ9UMR7 237 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 PROCRQ9UNN8 238 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 KALRNO60229 2985 aa12.68□□□□□ -0.38
SKA2-205ENST00000580541 SLC35F4A4IF30 521 aa12.68□□□□□ -0.38
SKA2-205ENST00000580541 TRAF3IP2O43734 574 aaPredicted RBP12.68□□□□□ -0.38
SKA2-205ENST00000580541 TOXO94900 526 aa12.68□□□□□ -0.38
SKA2-205ENST00000580541 TXNDC12O95881 172 aa12.68□□□□□ -0.38
SKA2-205ENST00000580541 HLA-DOBP13765 273 aa12.68□□□□□ -0.38
SKA2-205ENST00000580541 ACADSP16219 412 aa12.68□□□□□ -0.38
SKA2-205ENST00000580541 KLK2P20151 261 aa12.68□□□□□ -0.38
SKA2-205ENST00000580541 CHRNB4P30926 498 aa12.68□□□□□ -0.38
SKA2-205ENST00000580541 GRK5P34947 590 aa12.68□□□□□ -0.38
SKA2-205ENST00000580541 KIR2DL2P43627 348 aaPredicted RBP12.68□□□□□ -0.38
SKA2-205ENST00000580541 CLRN1P58418 232 aa12.68□□□□□ -0.38
SKA2-205ENST00000580541 CDK5Q00535 292 aa12.68□□□□□ -0.38
SKA2-205ENST00000580541 PTGES3Q15185 160 aaKnown RBP12.68□□□□□ -0.38
SKA2-205ENST00000580541 GUSBP1Q15486 140 aa12.68□□□□□ -0.38
SKA2-205ENST00000580541 TTC23Q5W5X9 447 aa12.68□□□□□ -0.38
SKA2-205ENST00000580541 XKRXQ6PP77 449 aa12.68□□□□□ -0.38
SKA2-205ENST00000580541 PLXDC2Q6UX71 529 aa12.68□□□□□ -0.38
SKA2-205ENST00000580541 CASP12Q6UXS9 341 aa12.68□□□□□ -0.38
SKA2-205ENST00000580541 THSD4Q6ZMP0 1018 aa12.68□□□□□ -0.38
SKA2-205ENST00000580541 BEND4Q6ZU67 534 aa12.68□□□□□ -0.38
SKA2-205ENST00000580541 JAZF1Q86VZ6 243 aa12.68□□□□□ -0.38
SKA2-205ENST00000580541 GPR137CQ8N3F9 429 aa12.68□□□□□ -0.38
SKA2-205ENST00000580541 ZIC4Q8N9L1 334 aa12.68□□□□□ -0.38
SKA2-205ENST00000580541 OR6N1Q8NGY5 312 aa12.68□□□□□ -0.38
SKA2-205ENST00000580541 ZNF775Q96BV0 537 aaPredicted RBP12.68□□□□□ -0.38
SKA2-205ENST00000580541 ZNF385AQ96PM9 386 aaKnown RBP12.68□□□□□ -0.38
SKA2-205ENST00000580541 ALG12Q9BV10 488 aa12.68□□□□□ -0.38
SKA2-205ENST00000580541 SLC25A19Q9HC21 320 aa12.68□□□□□ -0.38
SKA2-205ENST00000580541 IL20RAQ9UHF4 553 aa12.68□□□□□ -0.38
SKA2-205ENST00000580541 ING1Q9UK53 422 aaPredicted RBP12.68□□□□□ -0.38
SKA2-205ENST00000580541 ALPK2Q86TB3 2170 aa12.68□□□□□ -0.38
SKA2-205ENST00000580541 INTS1Q8N201 2190 aaKnown RBP12.67□□□□□ -0.38
SKA2-205ENST00000580541 A0A0G2JNJ9 132 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 RIIAD1A6NNX1 92 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 BHLHE40O14503 412 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 ARHGEF9O43307 516 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 MITFO75030 526 aaPredicted RBP12.67□□□□□ -0.38
SKA2-205ENST00000580541 PPP1R3DO95685 299 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 RENP00797 406 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 TP53P04637 393 aaPredicted RBP12.67□□□□□ -0.38
SKA2-205ENST00000580541 CD8BP10966 210 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 AGAP20933 346 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 PAICSP22234 425 aaKnown RBP12.67□□□□□ -0.38
SKA2-205ENST00000580541 VHLP40337 213 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 GUCA1AP43080 201 aaPredicted RBP12.67□□□□□ -0.38
SKA2-205ENST00000580541 OR3A2P47893 321 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 HSPA13P48723 471 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 FXYD6P3P58550 94 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 CDC42P60953 191 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 SIRPAP78324 504 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 TOP3AQ13472 1001 aaPredicted RBP12.67□□□□□ -0.38
SKA2-205ENST00000580541 PGGHGQ32M88 737 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 THEM4Q5T1C6 240 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 ARMC4Q5T2S8 1044 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 NHLRC1Q6VVB1 395 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 IGFN1Q86VF2 1251 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 UBE2J2Q8N2K1 259 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 RPRMLQ8N4K4 120 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 DHRSXQ8N5I4 330 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 ASB10Q8WXI3 467 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 TXNDC15Q96J42 360 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 SNX18Q96RF0 628 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 LINC00470Q9BZP3 86 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 ENKD1Q9H0I2 346 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 SLCO5A1Q9H2Y9 848 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 MED29Q9NX70 200 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 Q9UFV3 132 aa12.67□□□□□ -0.38
SKA2-205ENST00000580541 DIDO1Q9BTC0 2240 aaKnown RBP12.66□□□□□ -0.38
SKA2-205ENST00000580541 PCNX1Q96RV3 2341 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 ZAR1LA6NP61 321 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 KDM4EB2RXH2 506 aaPredicted RBP12.66□□□□□ -0.38
SKA2-205ENST00000580541 MSTNO14793 375 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 TNFSF13O75888 250 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 SMNDC1O75940 238 aaKnown RBP eCLIP12.66□□□□□ -0.38
SKA2-205ENST00000580541 ZNF432O94892 652 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 ZNF3P17036 446 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 UQCRFS1P47985 274 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 CSNK1A1P48729 337 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 CAMK2DQ13557 499 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 KRR1Q13601 381 aaKnown RBP12.66□□□□□ -0.38
SKA2-205ENST00000580541 SLC25A35Q3KQZ1 300 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 ZIK1Q3SY52 487 aaPredicted RBP12.66□□□□□ -0.38
SKA2-205ENST00000580541 FBXW9Q5XUX1 488 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 FBXW10Q5XX13 1052 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms