RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 A0A096LPE4 126 aa12.55□□□□□ -0.4
SMARCE1-216ENST00000580419 A0A1W2PPZ6 126 aa12.55□□□□□ -0.4
SMARCE1-216ENST00000580419 SLC35F4A4IF30 521 aa12.55□□□□□ -0.4
SMARCE1-216ENST00000580419 TRAPPC13A5PLN9 417 aa12.55□□□□□ -0.4
SMARCE1-216ENST00000580419 NPIPB13A6NJU9 1138 aa12.55□□□□□ -0.4
SMARCE1-216ENST00000580419 ZNF726A6NNF4 738 aa12.55□□□□□ -0.4
SMARCE1-216ENST00000580419 NPIPB4C9JG80 1138 aa12.55□□□□□ -0.4
SMARCE1-216ENST00000580419 GPRIN2O60269 458 aa12.55□□□□□ -0.4
SMARCE1-216ENST00000580419 LYPD3O95274 346 aa12.55□□□□□ -0.4
SMARCE1-216ENST00000580419 ZNF35P13682 527 aa12.55□□□□□ -0.4
SMARCE1-216ENST00000580419 ZNF14P17017 642 aaPredicted RBP12.55□□□□□ -0.4
SMARCE1-216ENST00000580419 NR4A1P22736 598 aa12.55□□□□□ -0.4
SMARCE1-216ENST00000580419 ZNF74Q16587 644 aa12.55□□□□□ -0.4
SMARCE1-216ENST00000580419 GSG1Q2KHT4 349 aa12.55□□□□□ -0.4
SMARCE1-216ENST00000580419 SLC46A3Q7Z3Q1 461 aa12.55□□□□□ -0.4
SMARCE1-216ENST00000580419 RETREG3Q86VR2 466 aa12.55□□□□□ -0.4
SMARCE1-216ENST00000580419 GPR32P1Q8NGA4 272 aa12.55□□□□□ -0.4
SMARCE1-216ENST00000580419 OR8J3Q8NGG0 315 aa12.55□□□□□ -0.4
SMARCE1-216ENST00000580419 OR6T1Q8NGN1 323 aa12.55□□□□□ -0.4
SMARCE1-216ENST00000580419 ADAMTS16Q8TE57 1224 aa12.55□□□□□ -0.4
SMARCE1-216ENST00000580419 LIPHQ8WWY8 451 aa12.55□□□□□ -0.4
SMARCE1-216ENST00000580419 HPS1Q92902 700 aa12.55□□□□□ -0.4
SMARCE1-216ENST00000580419 ZNF837Q96EG3 531 aaPredicted RBP12.55□□□□□ -0.4
SMARCE1-216ENST00000580419 MOGAT1Q96PD6 335 aa12.55□□□□□ -0.4
SMARCE1-216ENST00000580419 ARGLU1Q9NWB6 273 aaPredicted RBP12.55□□□□□ -0.4
SMARCE1-216ENST00000580419 TMEM129A0AVI4 362 aa12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 UBL3O95164 117 aa12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 TACSTD2P09758 323 aa12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 ASAH2BP0C7U1 165 aa12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 IGHV4-31P0DP07 118 aa12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 THRBP10828 461 aa12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 H2AFXP16104 143 aaPredicted RBP12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 ZNF23P17027 643 aa12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 CD247P20963 164 aa12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 AQP1P29972 269 aa12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 GLRXP35754 106 aa12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 RBM34P42696 430 aaKnown RBP12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 GZMMP51124 257 aa12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 RPS23P62266 143 aaKnown RBP12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 CYLC2Q14093 348 aaPredicted RBP12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 VMACQ2NL98 169 aa12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 TRMT5Q32P41 509 aaKnown RBP12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 ENTPD8Q5MY95 495 aa12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 REP15Q6BDI9 236 aa12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 HDDC2Q7Z4H3 204 aa12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 MDP1Q86V88 176 aa12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 ZNF786Q8N393 782 aa12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 TMEM54Q969K7 222 aa12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 SEPHS2Q99611 448 aa12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 FOXB1Q99853 325 aa12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 WFDC6Q9BQY6 131 aa12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 C1orf198Q9H425 327 aa12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 NOX3Q9HBY0 568 aa12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 STX18Q9P2W9 335 aaKnown RBP12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 POFUT2Q9Y2G5 429 aa12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 CMAHPQ9Y471 501 aa12.54□□□□□ -0.4
SMARCE1-216ENST00000580419 ZNF503-AS2A6NEH8 195 aa12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 BBIP1A8MTZ0 92 aa12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 hCG_2039718K7EN88 272 aa12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 M0R3G1 203 aa12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 IFNA14P01570 189 aa12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 TSPAN19P0C672 248 aa12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 HLA-DOBP13765 273 aa12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 THBS4P35443 961 aa12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 ZNF133P52736 654 aaPredicted RBP12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 MRPS11P82912 194 aaKnown RBP12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 NFYCQ13952 458 aa12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 DAG1Q14118 895 aa12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 NPTX1Q15818 432 aa12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 HIST3H3Q16695 136 aa12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 MMEL1Q495T6 779 aa12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 PHYHD1Q5SRE7 291 aa12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 ERICH5Q6P6B1 374 aa12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 TTC33Q6PID6 262 aaPredicted RBP12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 ZNF813Q6ZN06 617 aa12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 CALHM3Q86XJ0 350 aa12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 SMYD1Q8NB12 490 aa12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 OR6N1Q8NGY5 312 aa12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 TMEM158Q8WZ71 300 aa12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 SLC25A44Q96H78 314 aaPredicted RBP12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 C1orf159Q96HA4 380 aa12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 KCNK17Q96T54 332 aa12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 PRR14Q9BWN1 585 aa12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 ULBP2Q9BZM5 246 aa12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 MS4A5Q9H3V2 200 aa12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 NANSQ9NR45 359 aa12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 TAS2R5Q9NYW4 299 aa12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 GLTPQ9NZD2 209 aa12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 BAG5Q9UL15 447 aa12.53□□□□□ -0.4
SMARCE1-216ENST00000580419 SLC22A23A1A5C7 686 aa12.52□□□□□ -0.41
SMARCE1-216ENST00000580419 SLC22A2O15244 555 aa12.52□□□□□ -0.41
SMARCE1-216ENST00000580419 SYNGR3O43761 229 aa12.52□□□□□ -0.41
SMARCE1-216ENST00000580419 LMX1BO60663 402 aa12.52□□□□□ -0.41
SMARCE1-216ENST00000580419 OR6A2O95222 327 aa12.52□□□□□ -0.41
SMARCE1-216ENST00000580419 SERPINA5P05154 406 aa12.52□□□□□ -0.41
SMARCE1-216ENST00000580419 ADORA3P0DMS8 318 aa12.52□□□□□ -0.41
SMARCE1-216ENST00000580419 OR8G3PP0DMU2 310 aa12.52□□□□□ -0.41
SMARCE1-216ENST00000580419 CSNK1A1P48729 337 aa12.52□□□□□ -0.41
SMARCE1-216ENST00000580419 MTPNP58546 118 aa12.52□□□□□ -0.41
SMARCE1-216ENST00000580419 TUBA1BP68363 451 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms