RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 ZNF879B4DU55 563 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 SCDO00767 359 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 SSNA1O43805 119 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 NSA2O95478 260 aaKnown RBP9.53□□□□□ -0.88
TOP3A-209ENST00000580095 DHFRP00374 187 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 SERPINA3P01011 423 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 STOMP27105 288 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 SKP2Q13309 424 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 FAM199XQ6PEV8 388 aaPredicted RBP9.53□□□□□ -0.88
TOP3A-209ENST00000580095 ZNF704Q6ZNC4 412 aaPredicted RBP9.53□□□□□ -0.88
TOP3A-209ENST00000580095 SYS1Q8N2H4 156 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 KDM8Q8N371 416 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 OR8H1Q8NGG4 311 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 TCTN2Q96GX1 697 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 NMNAT2Q9BZQ4 307 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 MMP25Q9NPA2 562 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 FRRS1LQ9P0K9 344 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 PCDHGA9Q9Y5G4 932 aaKnown RBP9.53□□□□□ -0.88
TOP3A-209ENST00000580095 ASCC3Q8N3C0 2202 aaKnown RBP9.53□□□□□ -0.88
TOP3A-209ENST00000580095 EML5Q05BV3 1969 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 TRAV8-7A0A075B6U6 113 aa9.52□□□□□ -0.88
TOP3A-209ENST00000580095 IFITM5A6NNB3 132 aa9.52□□□□□ -0.88
TOP3A-209ENST00000580095 SRPX2O60687 465 aaPredicted RBP9.52□□□□□ -0.88
TOP3A-209ENST00000580095 HLA-DQA2P01906 255 aa9.52□□□□□ -0.88
TOP3A-209ENST00000580095 ADRA2CP18825 462 aa9.52□□□□□ -0.88
TOP3A-209ENST00000580095 CD53P19397 219 aa9.52□□□□□ -0.88
TOP3A-209ENST00000580095 IGFBP4P22692 258 aa9.52□□□□□ -0.88
TOP3A-209ENST00000580095 SLC37A1P57057 533 aa9.52□□□□□ -0.88
TOP3A-209ENST00000580095 RPS4XP62701 263 aaKnown RBP9.52□□□□□ -0.88
TOP3A-209ENST00000580095 MESTQ5EB52 335 aa9.52□□□□□ -0.88
TOP3A-209ENST00000580095 BICRALQ6AI39 1079 aa9.52□□□□□ -0.88
TOP3A-209ENST00000580095 CHRDL2Q6WN34 429 aa9.52□□□□□ -0.88
TOP3A-209ENST00000580095 ATG4DQ86TL0 474 aaPredicted RBP9.52□□□□□ -0.88
TOP3A-209ENST00000580095 PM20D2Q8IYS1 436 aa9.52□□□□□ -0.88
TOP3A-209ENST00000580095 C9orf62Q8N4C0 152 aa9.52□□□□□ -0.88
TOP3A-209ENST00000580095 HAVCR2Q8TDQ0 301 aa9.52□□□□□ -0.88
TOP3A-209ENST00000580095 SCMH1Q96GD3 660 aa9.52□□□□□ -0.88
TOP3A-209ENST00000580095 UBQLN4Q9NRR5 601 aa9.52□□□□□ -0.88
TOP3A-209ENST00000580095 GRHPRQ9UBQ7 328 aa9.52□□□□□ -0.88
TOP3A-209ENST00000580095 SPATA2Q9UM82 520 aa9.52□□□□□ -0.88
TOP3A-209ENST00000580095 IGHV3-20A0A0C4DH32 117 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 MEIS3P1A6NDR6 274 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 TMEM150CB9EJG8 249 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 ZNF593O00488 134 aaPredicted RBP9.52□□□□□ -0.89
TOP3A-209ENST00000580095 BET1O15155 118 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 GLCEO94923 617 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 CD14P08571 375 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 VEGFCP49767 419 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 MMP15P51511 669 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 NR0B1P51843 470 aaKnown RBP9.52□□□□□ -0.89
TOP3A-209ENST00000580095 OR1D5P58170 312 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 TNK1Q13470 666 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 GGTLC2Q14390 218 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 FAM209BQ5JX69 171 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 WBP2NLQ6ICG8 309 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 FAM122BQ7Z309 247 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 SLITRK4Q8IW52 837 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 ZNF527Q8NB42 609 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 ZNF431Q8TF32 576 aaPredicted RBP9.52□□□□□ -0.89
TOP3A-209ENST00000580095 THAP3Q8WTV1 239 aaPredicted RBP9.52□□□□□ -0.89
TOP3A-209ENST00000580095 WDR89Q96FK6 387 aaPredicted RBP9.52□□□□□ -0.89
TOP3A-209ENST00000580095 TSPAN32Q96QS1 320 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 NIPAL2Q9H841 368 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 ZFP64Q9NPA5 681 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 MRPL39Q9NYK5 338 aaKnown RBP9.52□□□□□ -0.89
TOP3A-209ENST00000580095 CA14Q9ULX7 337 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 ZNF281Q9Y2X9 895 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 ARPC3O15145 178 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 YKT6O15498 198 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 ZNF264O43296 627 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 CDC40O60508 579 aaKnown RBP eCLIP9.52□□□□□ -0.89
TOP3A-209ENST00000580095 PPM1BO75688 479 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 H2AFB2P0C5Z0 115 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 POU3F3P20264 500 aaPredicted RBP9.52□□□□□ -0.89
TOP3A-209ENST00000580095 DCTDP32321 178 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 BLKP51451 505 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 IGLV3-21P80748 117 aaPredicted RBP9.52□□□□□ -0.89
TOP3A-209ENST00000580095 ZNF117Q03924 483 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 SQSTM1Q13501 440 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 ETFDHQ16134 617 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 TOR2AQ5JU69 321 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 YOD1Q5VVQ6 348 aaPredicted RBP9.52□□□□□ -0.89
TOP3A-209ENST00000580095 METTL11BQ5VVY1 283 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 TIGD3Q6B0B8 471 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 Q6ZTK2 550 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 TMPRSS12Q86WS5 348 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 GALNT11Q8NCW6 608 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 OR2T4Q8NH00 348 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 C1orf216Q8TAB5 229 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 SYNPRQ8TBG9 265 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 C8orf33Q9H7E9 229 aaPredicted RBP9.52□□□□□ -0.89
TOP3A-209ENST00000580095 PDE7BQ9NP56 450 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 LANCL2Q9NS86 450 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 ABRACLQ9P1F3 81 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 OR5V1Q9UGF6 321 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 KCNG2Q9UJ96 466 aa9.52□□□□□ -0.89
TOP3A-209ENST00000580095 ADH7P40394 386 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 GABRA4P48169 554 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 PRPS1P60891 318 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 KLF9Q13886 244 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms