RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 EURLQ9NYK6 297 aa2.64□□□□□ -1.99
KPNB1-208ENST00000580019 EMC3Q9P0I2 261 aa2.64□□□□□ -1.99
KPNB1-208ENST00000580019 KIF25Q9UIL4 384 aa2.64□□□□□ -1.99
KPNB1-208ENST00000580019 ZNF229Q9UJW7 825 aa2.64□□□□□ -1.99
KPNB1-208ENST00000580019 PDE10AQ9Y233 779 aa2.64□□□□□ -1.99
KPNB1-208ENST00000580019 TCF19Q9Y242 345 aa2.64□□□□□ -1.99
KPNB1-208ENST00000580019 PPP2R2CQ9Y2T4 447 aa2.64□□□□□ -1.99
KPNB1-208ENST00000580019 VPS8Q8N3P4 1428 aa2.64□□□□□ -1.99
KPNB1-208ENST00000580019 TRPM7Q96QT4 1865 aa2.64□□□□□ -1.99
KPNB1-208ENST00000580019 BAHCC1Q9P281 2608 aa2.64□□□□□ -1.99
KPNB1-208ENST00000580019 RGPD5Q99666 1765 aa2.64□□□□□ -1.99
KPNB1-208ENST00000580019 PAPPA2Q9BXP8 1791 aa2.64□□□□□ -1.99
KPNB1-208ENST00000580019 ZFHX4Q86UP3 3567 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 TCRBV9S1A1TA0A576 114 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 MGAT4DA6NG13 374 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 RNF212BA8MTL3 300 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 E7ESA3 106 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 F8VZ95 297 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 RNASEK-C17orf49H0YIS7 233 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.63□□□□□ -1.99
KPNB1-208ENST00000580019 TOR1AO14656 332 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 SCAMP2O15127 329 aaKnown RBP2.63□□□□□ -1.99
KPNB1-208ENST00000580019 SIVA1O15304 175 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 TYROBPO43914 113 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 CXCL13O43927 109 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 ERLIN2O94905 339 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 NUDT14O95848 222 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 FADS2O95864 444 aaKnown RBP2.63□□□□□ -1.99
KPNB1-208ENST00000580019 IFNW1P05000 195 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 OCMP0CE72 109 aaPredicted RBP2.63□□□□□ -1.99
KPNB1-208ENST00000580019 PRSS56P0CW18 603 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 IGHV4-38-2P0DP08 117 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 DAOP14920 347 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 PMCHP20382 165 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 COX5AP20674 150 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 PSMB6P28072 239 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 CFHR2P36980 270 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 VHLP40337 213 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 TNFSF9P41273 254 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 TSFMP43897 325 aaKnown RBP2.63□□□□□ -1.99
KPNB1-208ENST00000580019 PCYT1AP49585 367 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 ARHGDIBP52566 201 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 STX17P56962 302 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 ZNF33AQ06730 810 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 SIGLEC14Q08ET2 396 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 SCRN3Q0VDG4 424 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 PMS2P3Q13401 168 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 VGLL4Q14135 290 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 GNA13Q14344 377 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 DMC1Q14565 340 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 GNMTQ14749 295 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 HLA-BQ31612 363 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 ZNF672Q499Z4 452 aaPredicted RBP2.63□□□□□ -1.99
KPNB1-208ENST00000580019 GTDC1Q4AE62 458 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 UNC50Q53HI1 259 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 PRMT9Q6P2P2 845 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 SPESP1Q6UW49 350 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 APOOLQ6UXV4 268 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 TMPRSS11AQ6ZMR5 421 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 PLEKHG7Q6ZR37 379 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 STOX1Q6ZVD7 989 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 CDKL3Q8IVW4 592 aaPredicted RBP2.63□□□□□ -1.99
KPNB1-208ENST00000580019 NELFCDQ8IXH7 590 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 IQCKQ8N0W5 287 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 LINC01561Q8N1V8 128 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 BPIFB2Q8N4F0 458 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 RNF10Q8N5U6 811 aaKnown RBP2.63□□□□□ -1.99
KPNB1-208ENST00000580019 TPRX1Q8N7U7 411 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 OR10H4Q8NGA5 316 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 OR9Q2Q8NGE9 314 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 OR52H1Q8NGJ2 320 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 OR10G8Q8NGN5 311 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 TCP10LQ8TDR4 215 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 SETD7Q8WTS6 366 aaKnown RBP2.63□□□□□ -1.99
KPNB1-208ENST00000580019 NUDCD2Q8WVJ2 157 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 TMEM239Q8WW34 195 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 TCTEX1D2Q8WW35 142 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 TMED6Q8WW62 240 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 DYRK2Q92630 601 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 BIRC7Q96CA5 298 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 FAF2Q96CS3 445 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 DNAJA3Q96EY1 480 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 CHMP6Q96FZ7 201 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 ZNF514Q96K75 400 aaPredicted RBP2.63□□□□□ -1.99
KPNB1-208ENST00000580019 C2orf48Q96LS8 159 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 TSSK3Q96PN8 268 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 ALS2CR12Q96Q35 445 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 FAM173AQ9BQD7 235 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 PELOQ9BRX2 385 aaKnown RBP2.63□□□□□ -1.99
KPNB1-208ENST00000580019 MED10Q9BTT4 135 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 OSBPL10Q9BXB5 764 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 SPZ1Q9BXG8 430 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 ANGPTL4Q9BY76 406 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 UPF3BQ9BZI7 483 aaKnown RBP2.63□□□□□ -1.99
KPNB1-208ENST00000580019 ZYG11BQ9C0D3 744 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 DRC3Q9H069 523 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 NAT10Q9H0A0 1025 aaKnown RBP2.63□□□□□ -1.99
KPNB1-208ENST00000580019 OR51M1Q9H341 326 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 PIGUQ9H490 435 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 SAV1Q9H4B6 383 aaPredicted RBP2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms