RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 IGHMP01871 453 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 FABP3P05413 133 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 H1F0P07305 194 aaKnown RBP3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 TMIGD3P0DMS9 266 aaPredicted RBP3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 UMPSP11172 480 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 UQCRBP14927 111 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 NQO1P15559 274 aaKnown RBP3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 COX5AP20674 150 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 CXCR1P25024 350 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 CTSSP25774 331 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 LOXP28300 417 aaPredicted RBP3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 SLC7A1P30825 629 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 CHRNB4P30926 498 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 RRM2P31350 389 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 OR3A2P47893 321 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 SELENOPP49908 381 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 ERFP50548 548 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 RASSF2P50749 326 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 ZNF133P52736 654 aaPredicted RBP3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 CARD18P57730 90 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 TAS2R41P59536 307 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 COPZ1P61923 177 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 SLC35A1P78382 337 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 RBPJQ06330 500 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 RPL18Q07020 188 aaKnown RBP3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 LGALS3BPQ08380 585 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 PMPCAQ10713 525 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 ST3GAL3Q11203 375 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 PPP1R8Q12972 351 aaKnown RBP3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 KPNB1Q14974 876 aaKnown RBP3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 TRAM2Q15035 370 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 OR7A5Q15622 319 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 SGCBQ16585 318 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 ZSCAN26Q16670 478 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 HIST3H3Q16695 136 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 EXOC3L2Q2M3D2 409 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 PHYHD1Q5SRE7 291 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 ZNF362Q5T0B9 420 aaPredicted RBP3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 OTUD3Q5T2D3 398 aaPredicted RBP3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 ARMC4Q5T2S8 1044 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 OR2T5Q6IEZ7 315 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 C1orf94Q6P1W5 598 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 PGBD2Q6P3X8 592 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 FAHD1Q6P587 224 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 ZNF474Q6S9Z5 364 aaPredicted RBP3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 CCDC121Q6ZUS5 278 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 CREB3L2Q70SY1 520 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 FAM122BQ7Z309 247 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 TUSC5Q8IXB3 177 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 NRMQ8IXM6 262 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 RNF113BQ8IZP6 322 aaKnown RBP3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 HS3ST5Q8IZT8 346 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 GABRG1Q8N1C3 465 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 ZNF808Q8N4W9 903 aaPredicted RBP3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 FAM26EQ8N5C1 309 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 ATP6V1C2Q8NEY4 427 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 OR4K5Q8NGD3 323 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 OR9K2Q8NGE7 335 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 OR9Q2Q8NGE9 314 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 OR8D4Q8NGM9 314 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 OR13C2Q8NGS9 318 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 OR6K3Q8NGY3 331 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 OR2T29Q8NH02 315 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 LILRB4Q8NHJ6 448 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 MOSPD2Q8NHP6 518 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 ZNF519Q8TB69 540 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 SLC26A7Q8TE54 656 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 LZICQ8WZA0 190 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 TMEM45BQ96B21 275 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 DDIT4LQ96D03 193 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 BPIFA2Q96DR5 249 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 GMPPAQ96IJ6 420 aaPredicted RBP3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 BOD1Q96IK1 185 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 CITED4Q96RK1 184 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 GPX7Q96SL4 187 aaPredicted RBP3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 DDOQ99489 341 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 EPYCQ99645 322 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 TM9SF2Q99805 663 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 SF3B5Q9BWJ5 86 aaKnown RBP3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 SFXN3Q9BWM7 321 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 CHID1Q9BWS9 393 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 MRPL13Q9BYD1 178 aaKnown RBP3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 TRIM15Q9C019 465 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 GABARAPL1Q9H0R8 117 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 EXO5Q9H790 373 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 FKRPQ9H9S5 495 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 TMEM27Q9HBJ8 222 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 CHST11Q9NPF2 352 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 PLSCR4Q9NRQ2 329 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 SERINC1Q9NRX5 453 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 PAQR5Q9NXK6 330 aaPredicted RBP3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 REV1Q9UBZ9 1251 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 MALT1Q9UDY8 824 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 ZNF629Q9UEG4 869 aaPredicted RBP3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 PRSS50Q9UI38 385 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 TMEFF2Q9UIK5 374 aaPredicted RBP3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 ZNF229Q9UJW7 825 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 CLEC4AQ9UMR7 237 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 SIGLEC7Q9Y286 467 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 B3GALT5Q9Y2C3 310 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms