RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 LINC00854A0A1B0GVQ3 168 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 MDFIC2A0A1B0GVS7 189 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 TMEM120BA0PK00 339 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 ZNF503-AS2A6NEH8 195 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 LIPT2A6NK58 231 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 TRIM49D1C9J1S8 452 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 COPEO14579 308 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 TYROBPO43914 113 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 GLRA3O75311 464 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 CLPXO76031 633 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 AGR2O95994 175 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 HLA-HP01893 362 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 CHRM4P08173 479 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 PPIAL4GP0DN37 164 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 ZNF35P13682 527 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 ZNF14P17017 642 aaPredicted RBP4.99□□□□□ -1.61
SMG6-219ENST00000575663 ZNF43P17038 809 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 SDC1P18827 310 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 KRT4P19013 534 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 EFNA1P20827 205 aaPredicted RBP4.99□□□□□ -1.61
SMG6-219ENST00000575663 IMPDH1P20839 514 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 DRD4P21917 467 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 TACR3P29371 465 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 PTDSS1P48651 473 aaKnown RBP4.99□□□□□ -1.61
SMG6-219ENST00000575663 RPL38P63173 70 aaKnown RBP4.99□□□□□ -1.61
SMG6-219ENST00000575663 CAMK2DQ13557 499 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 ARHGAP11BQ3KRB8 267 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 LSM12Q3MHD2 195 aaKnown RBP4.99□□□□□ -1.61
SMG6-219ENST00000575663 CCDC153Q494R4 210 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 ESCO2Q56NI9 601 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 ATAD3BQ5T9A4 648 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 BTNL3Q6UXE8 466 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 KLHL36Q8N4N3 616 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 PIK3C3Q8NEB9 887 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 OR5AK3PQ8NH89 298 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 CLHC1Q8NHS4 586 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 SYNPRQ8TBG9 265 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 SUN5Q8TC36 379 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 OR5P2Q8WZ92 322 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 CCL17Q92583 94 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 CCDC126Q96EE4 140 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 KTI12Q96EK9 354 aaPredicted RBP4.99□□□□□ -1.61
SMG6-219ENST00000575663 MS4A3Q96HJ5 214 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 APOPT1Q96IL0 206 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 VCX3BQ9H321 246 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 GPR35Q9HC97 309 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 NOX4Q9NPH5 578 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 MMP26Q9NRE1 261 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 POLE3Q9NRF9 147 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 TNFRSF19Q9NS68 423 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.99□□□□□ -1.61
SMG6-219ENST00000575663 NECAP2Q9NVZ3 263 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 ADPRHL2Q9NX46 363 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 IL20RAQ9UHF4 553 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 OSGIN1Q9UJX0 560 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 MKLN1Q9UL63 735 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 POLR3KQ9Y2Y1 108 aaPredicted RBP4.99□□□□□ -1.61
SMG6-219ENST00000575663 TMED5Q9Y3A6 229 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 WDR45Q9Y484 360 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 INSIG2Q9Y5U4 225 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 KCNE3Q9Y6H6 103 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 EPPK1P58107 5090 aaKnown RBP4.99□□□□□ -1.61
SMG6-219ENST00000575663 PCNX3Q9H6A9 2034 aa4.99□□□□□ -1.61
SMG6-219ENST00000575663 IGLV3-9A0A075B6K5 115 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 IGHV3OR16-10A0A075B7F0 116 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 ZC3H12DA2A288 527 aaKnown RBP4.98□□□□□ -1.61
SMG6-219ENST00000575663 GMNCA6NCL1 334 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 A8MXK9 166 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 TMEM229AB2RXF0 380 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 TMEM114B3SHH9 223 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 NPIPB8E9PQR5 432 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 SLC28A1O00337 649 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 POLR3GO15318 223 aaPredicted RBP4.98□□□□□ -1.61
SMG6-219ENST00000575663 CFLARO15519 480 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 FRS3O43559 492 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 FCMRO60667 390 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 ENTPD5O75356 428 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 B3GALNT1O75752 331 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 UBL3O95164 117 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 TGDSO95455 350 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 FAM107AO95990 144 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 PLATP00750 562 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 OPN1MWP04001 364 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 SBK3P0C264 359 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 OPN1MW2P0DN77 364 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 OPN1MW3P0DN78 364 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 IGHV4-38-2P0DP08 117 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 PRPH2P23942 346 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 CXCR1P25024 350 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 SERPINB5P36952 375 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 PSMD7P51665 324 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 FOXA1P55317 472 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 CLDN17P56750 224 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 KRTAP10-3P60369 221 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 RELBQ01201 579 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 RBBP4Q09028 425 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 GNA13Q14344 377 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 KIAA0040Q15053 153 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 RCN1Q15293 331 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 TSTQ16762 297 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms