RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 HLA-DQA2P01906 255 aa12.68□□□□□ -0.38
VPS33B-208ENST00000574755 KRT8P05787 483 aa12.68□□□□□ -0.38
VPS33B-208ENST00000574755 UCHL1P09936 223 aa12.68□□□□□ -0.38
VPS33B-208ENST00000574755 EIF2B2P49770 351 aaKnown RBP12.68□□□□□ -0.38
VPS33B-208ENST00000574755 LPAL2Q16609 132 aa12.68□□□□□ -0.38
VPS33B-208ENST00000574755 SLC23A3Q6PIS1 610 aa12.68□□□□□ -0.38
VPS33B-208ENST00000574755 ARSKQ6UWY0 536 aa12.68□□□□□ -0.38
VPS33B-208ENST00000574755 SYT9Q86SS6 491 aa12.68□□□□□ -0.38
VPS33B-208ENST00000574755 TRMT10AQ8TBZ6 339 aaKnown RBP12.68□□□□□ -0.38
VPS33B-208ENST00000574755 HSD17B8Q92506 261 aa12.68□□□□□ -0.38
VPS33B-208ENST00000574755 ITPKCQ96DU7 683 aa12.68□□□□□ -0.38
VPS33B-208ENST00000574755 KLHL15Q96M94 604 aa12.68□□□□□ -0.38
VPS33B-208ENST00000574755 INTS14Q96SY0 518 aa12.68□□□□□ -0.38
VPS33B-208ENST00000574755 TXNIPQ9H3M7 391 aa12.68□□□□□ -0.38
VPS33B-208ENST00000574755 PPP4R1LQ9P1A2 415 aa12.68□□□□□ -0.38
VPS33B-208ENST00000574755 IKZF2Q9UKS7 526 aa12.68□□□□□ -0.38
VPS33B-208ENST00000574755 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 PRSS37A4D1T9 235 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 FLRT2O43155 660 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 ZFPL1O95159 310 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 KLK3P07288 261 aaPredicted RBP12.67□□□□□ -0.38
VPS33B-208ENST00000574755 SYPP08247 313 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 CENPAP49450 140 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 TPTEP56180 551 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 RIN1Q13671 783 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 HSD17B12Q53GQ0 312 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 LIPNQ5VXI9 398 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 ZNF517Q6ZMY9 492 aaPredicted RBP12.67□□□□□ -0.38
VPS33B-208ENST00000574755 UBE2J2Q8N2K1 259 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 BMPERQ8N8U9 685 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 IL17RDQ8NFM7 739 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 ZNF519Q8TB69 540 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 SLC22A8Q8TCC7 542 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 THEM6Q8WUY1 208 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 DEFB126Q9BYW3 111 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 C11orf54Q9H0W9 315 aaPredicted RBP12.67□□□□□ -0.38
VPS33B-208ENST00000574755 METTL7AQ9H8H3 244 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 WDR54Q9H977 334 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 B3GAT2Q9NPZ5 323 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 MRM2Q9UI43 246 aaKnown RBP12.67□□□□□ -0.38
VPS33B-208ENST00000574755 ZNF281Q9Y2X9 895 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 ZNF879B4DU55 563 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 EIF4EP06730 217 aaKnown RBP12.67□□□□□ -0.38
VPS33B-208ENST00000574755 CCL4P13236 92 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 IL11P20809 199 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 APOBEC1P41238 236 aaKnown RBP12.67□□□□□ -0.38
VPS33B-208ENST00000574755 OR2B6P58173 313 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 TRA2AQ13595 282 aaKnown RBP eCLIP12.67□□□□□ -0.38
VPS33B-208ENST00000574755 BTBD16Q32M84 506 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 YIF1BQ5BJH7 314 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 AKAP14Q86UN6 197 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 ZNF248Q8NDW4 579 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 OR10G3Q8NGC4 313 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 RPS4Y2Q8TD47 263 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 NXPE2Q96DL1 559 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 ARL5BQ96KC2 179 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 UBL7Q96S82 380 aaPredicted RBP12.67□□□□□ -0.38
VPS33B-208ENST00000574755 MNTQ99583 582 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 CYSLTR2Q9NS75 346 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 MRPL39Q9NYK5 338 aaKnown RBP12.67□□□□□ -0.38
VPS33B-208ENST00000574755 NXT1Q9UKK6 140 aaKnown RBP12.67□□□□□ -0.38
VPS33B-208ENST00000574755 TMEM14AQ9Y6G1 99 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 RALGAPA1Q6GYQ0 2036 aa12.67□□□□□ -0.38
VPS33B-208ENST00000574755 A0A0G2JMP0 313 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 A0A0X1KG70 313 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 NOTOA8MTQ0 251 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 FTCDNL1E5RQL4 147 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 TFECO14948 347 aaPredicted RBP12.66□□□□□ -0.38
VPS33B-208ENST00000574755 SLC16A7O60669 478 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 UPK3AO75631 287 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 CYC1P08574 325 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 INPP1P49441 399 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 FOXF1Q12946 379 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 MELKQ14680 651 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 OR7A5Q15622 319 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 KDM8Q8N371 416 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 OR4M2Q8NGB6 313 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 MR1Q95460 341 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 RNF166Q96A37 237 aaPredicted RBP12.66□□□□□ -0.38
VPS33B-208ENST00000574755 FOXN4Q96NZ1 517 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 ULBP3Q9BZM4 244 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 SMOC1Q9H4F8 434 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 NOX4Q9NPH5 578 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 B9D1Q9UPM9 204 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 FKBP7Q9Y680 259 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 ACOD1A6NK06 481 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 PLA2G10O15496 165 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 HLA-DQB1P01920 261 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 EPXP11678 715 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 ALOX5APP20292 161 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 ZNF41P51814 821 aaPredicted RBP12.66□□□□□ -0.38
VPS33B-208ENST00000574755 INSM1Q01101 510 aaPredicted RBP12.66□□□□□ -0.38
VPS33B-208ENST00000574755 ZFP36L1Q07352 338 aaKnown RBP12.66□□□□□ -0.38
VPS33B-208ENST00000574755 PUDPQ08623 228 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 RAB43Q86YS6 212 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 DTX3Q8N9I9 347 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 OR4M1Q8NGD0 313 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 OR5AK2Q8NH90 309 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 DDIT4LQ96D03 193 aa12.66□□□□□ -0.38
VPS33B-208ENST00000574755 TSPAN10Q9H1Z9 355 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms