RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 SLC6A6P31641 620 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 FHL1Q13642 323 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 NR0B2Q15466 257 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 C10orf91Q5T1B1 145 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 LIPNQ5VXI9 398 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 C3orf33Q6P1S2 294 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 C5orf46Q6UWT4 87 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 AMZ2Q86W34 360 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 NRSN1Q8IZ57 195 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 OR4K14Q8NGD5 310 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 CCDC107Q8WV48 283 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 RNF166Q96A37 237 aaPredicted RBP13.15□□□□□ -0.3
SMG6-215ENST00000574501 PTCHD1Q96NR3 888 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 C1orf198Q9H425 327 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 CPED1A4D0V7 1026 aa13.14□□□□□ -0.31
SMG6-215ENST00000574501 MCIDASD6RGH6 385 aa13.14□□□□□ -0.31
SMG6-215ENST00000574501 CD34P28906 385 aa13.14□□□□□ -0.31
SMG6-215ENST00000574501 DHRS2Q13268 280 aa13.14□□□□□ -0.31
SMG6-215ENST00000574501 SMCO1Q147U7 214 aa13.14□□□□□ -0.31
SMG6-215ENST00000574501 ARHGAP11BQ3KRB8 267 aa13.14□□□□□ -0.31
SMG6-215ENST00000574501 ZNF813Q6ZN06 617 aa13.14□□□□□ -0.31
SMG6-215ENST00000574501 SLC35F3Q8IY50 421 aa13.14□□□□□ -0.31
SMG6-215ENST00000574501 ASB13Q8WXK3 278 aa13.14□□□□□ -0.31
SMG6-215ENST00000574501 LINC00615Q96LM1 132 aaPredicted RBP13.14□□□□□ -0.31
SMG6-215ENST00000574501 SULT2B1O00204 365 aa13.14□□□□□ -0.31
SMG6-215ENST00000574501 SPINT1O43278 529 aa13.14□□□□□ -0.31
SMG6-215ENST00000574501 CSN2P05814 226 aa13.14□□□□□ -0.31
SMG6-215ENST00000574501 ABOP16442 354 aa13.14□□□□□ -0.31
SMG6-215ENST00000574501 PRSS3P35030 304 aa13.14□□□□□ -0.31
SMG6-215ENST00000574501 MKI67P46013 3256 aaKnown RBP13.14□□□□□ -0.31
SMG6-215ENST00000574501 PSMD4P55036 377 aaKnown RBP13.14□□□□□ -0.31
SMG6-215ENST00000574501 RAB5BP61020 215 aa13.14□□□□□ -0.31
SMG6-215ENST00000574501 ECH1Q13011 328 aa13.14□□□□□ -0.31
SMG6-215ENST00000574501 INPP5JQ15735 1006 aaPredicted RBP13.14□□□□□ -0.31
SMG6-215ENST00000574501 Q499Y3 187 aa13.14□□□□□ -0.31
SMG6-215ENST00000574501 FIGNL1Q6PIW4 674 aa13.14□□□□□ -0.31
SMG6-215ENST00000574501 ENPP7Q6UWV6 458 aa13.14□□□□□ -0.31
SMG6-215ENST00000574501 NAA40Q86UY6 237 aa13.14□□□□□ -0.31
SMG6-215ENST00000574501 GABRG1Q8N1C3 465 aa13.14□□□□□ -0.31
SMG6-215ENST00000574501 CLEC1AQ8NC01 280 aa13.14□□□□□ -0.31
SMG6-215ENST00000574501 OR10AC1Q8NH08 325 aa13.14□□□□□ -0.31
SMG6-215ENST00000574501 EDARADDQ8WWZ3 215 aa13.14□□□□□ -0.31
SMG6-215ENST00000574501 MRI1Q9BV20 369 aa13.14□□□□□ -0.31
SMG6-215ENST00000574501 UQCC1Q9NVA1 299 aa13.14□□□□□ -0.31
SMG6-215ENST00000574501 CHRNA9Q9UGM1 479 aa13.14□□□□□ -0.31
SMG6-215ENST00000574501 LOC100509620A0A075B734 347 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 GXYLT2A0PJZ3 443 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 TTLL8A6PVC2 850 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 C4orf47A7E2U8 309 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 COLCA2A8K830 154 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 RD3LP0DJH9 198 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 SLC25A4P12235 298 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 DIO1P49895 249 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 PPT1P50897 306 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 GPR143P51810 404 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 SLC7A9P82251 487 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 ARHGAP19Q14CB8 494 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 PEA15Q15121 130 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 TSC22D1Q15714 1073 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 SCGB2B2Q4G0G5 96 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 ANKRD16Q6P6B7 361 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 ETV3LQ6ZN32 361 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 ZNF227Q86WZ6 799 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 GALNT16Q8N428 558 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 ZNF614Q8N883 585 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 OR51A4Q8NGJ6 313 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 OR10R2Q8NGX6 335 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 OR5AK2Q8NH90 309 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 ELP5Q8TE02 316 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 ARL11Q969Q4 196 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 IGSF21Q96ID5 467 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 MRGPRX3Q96LB0 322 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 MYADMQ96S97 322 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 LGR4Q9BXB1 951 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 ULBP3Q9BZM4 244 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 PCBD2Q9H0N5 130 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 ALX4Q9H161 411 aaPredicted RBP13.13□□□□□ -0.31
SMG6-215ENST00000574501 CDV3Q9UKY7 258 aaKnown RBP13.13□□□□□ -0.31
SMG6-215ENST00000574501 FARSAQ9Y285 508 aaKnown RBP13.13□□□□□ -0.31
SMG6-215ENST00000574501 C5orf42Q9H799 3197 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 A0A1B0GTI1 187 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 RAB3DO95716 219 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 HLA-AP01891 365 aaKnown RBP13.13□□□□□ -0.31
SMG6-215ENST00000574501 AMY2AP04746 511 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 S100A6P06703 90 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 NID1P14543 1247 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 RPL4P36578 427 aaKnown RBP13.13□□□□□ -0.31
SMG6-215ENST00000574501 PRDX1Q06830 199 aaKnown RBP13.13□□□□□ -0.31
SMG6-215ENST00000574501 SREBF2Q12772 1141 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 GGTLC2Q14390 218 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 TMEM35AQ53FP2 167 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 C17orf99Q6UX52 265 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 INO80EQ8NBZ0 244 aaPredicted RBP13.13□□□□□ -0.31
SMG6-215ENST00000574501 OR5AP2Q8NGF4 316 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 ZNF514Q96K75 400 aaPredicted RBP13.13□□□□□ -0.31
SMG6-215ENST00000574501 SLC46A2Q9BY10 475 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 FRRS1LQ9P0K9 344 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 GHRLQ9UBU3 117 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 SERTAD3Q9UJW9 196 aa13.13□□□□□ -0.31
SMG6-215ENST00000574501 GPR34Q9UPC5 381 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms