RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 OR8D1Q8WZ84 308 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 CREB3L1Q96BA8 519 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 FAHD2AQ96GK7 314 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 Q96MT0 163 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 OR14A2Q96R54 314 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 PSD2Q9BQI7 771 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 TMEM121Q9BTD3 319 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 OR51B5Q9H339 312 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 BEX1Q9HBH7 125 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 RETNQ9HD89 108 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 ABCB9Q9NP78 766 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 FBXO8Q9NRD0 319 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 OLFML3Q9NRN5 406 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 SPANXB1Q9NS25 103 aaPredicted RBP4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 PARVAQ9NVD7 372 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 MCUBQ9NWR8 336 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 TEX10Q9NXF1 929 aaPredicted RBP4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 PACSIN3Q9UKS6 424 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 PSG11Q9UQ72 335 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 R4GN57 208 aa4.37□□□□□ -1.71
TOPBP1-210ENST00000572787 KIR2DS5A0A0G2JLQ3 304 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 TRBV5-5A0A0J9YX44 114 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 A0A1B0GV72 72 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 ANKRD20A5PA0PJZ0 165 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 TSPAN11A1L157 253 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 ASPDHA6ND91 283 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 TVP23AA6NH52 213 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 A6NIZ1 184 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 SRRM3A6NNA2 597 aaPredicted RBP4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 RNF212BA8MTL3 300 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 SEC14L6B5MCN3 397 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 J3KR12 359 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 K7EN84 100 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 KIR2DS3K7RE56 304 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 TM9SF1O15321 606 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 SOX15O60248 233 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 PEX10O60683 326 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 MPDU1O75352 247 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 OR7A10O76100 309 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 MPZL1O95297 269 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 NDUFA10O95299 355 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 CTDNEP1O95476 244 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 ISG15P05161 165 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 ZDHHC11BP0C7U3 371 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 CCDC166P0CW27 439 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 C8orf88P0DMB2 117 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 CTSWP56202 376 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 DCDC1P59894 354 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 SEC61A1P61619 476 aaKnown RBP4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 DGCR2P98153 550 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 TNFRSF9Q07011 255 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 MFAP5Q13361 173 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 DGUOKQ16854 277 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 ACTL10Q5JWF8 245 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 BRMS1LQ5PSV4 323 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 IRAK1BP1Q5VVH5 260 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 OR4C11Q6IEV9 310 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 FAM45BPQ6NSW5 357 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 ZNF544Q6NX49 715 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 SLC25A47Q6Q0C1 308 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 ATRAIDQ6UW56 229 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 RBMS3Q6XE24 437 aaKnown RBP4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 FAM92BQ6ZTR7 304 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 TTLL10Q6ZVT0 673 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 CREB3L2Q70SY1 520 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 ASCL5Q7RTU5 278 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 LYG2Q86SG7 212 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 DTX1Q86Y01 620 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 WDFY1Q8IWB7 410 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 EID3Q8N140 333 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 CLIP4Q8N3C7 705 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 KIR3DL3Q8N743 410 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 LRRC52Q8N7C0 313 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 GVQW1Q8N7I0 195 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 TMEM35BQ8NCS4 154 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 OR52H1Q8NGJ2 320 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 FAM45AQ8TCE6 357 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 FBXO25Q8TCJ0 367 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 TFB1MQ8WVM0 346 aaKnown RBP4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 TFAP2BQ92481 460 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 GTF3AQ92664 365 aaKnown RBP4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 ABTB1Q969K4 478 aaPredicted RBP4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 ANKRD9Q96BM1 317 aaPredicted RBP4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 FLYWCH2Q96CP2 140 aaKnown RBP4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 ADOQ96SZ5 270 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 SLC38A3Q99624 504 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 MACROD1Q9BQ69 325 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 SLC35A5Q9BS91 424 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 DDA1Q9BW61 102 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 KRTAP4-9Q9BYQ8 210 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 UBXN6Q9BZV1 441 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 CAB39LQ9H9S4 337 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 NRN1Q9NPD7 142 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 ISYNA1Q9NPH2 558 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 INIPQ9NRY2 104 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 INTS9Q9NV88 658 aaKnown RBP4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 SDHAF2Q9NX18 166 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 SLC17A6Q9P2U8 582 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 TMCO1Q9UM00 188 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 MGAT4AQ9UM21 535 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms