RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 OTUB1Q96FW1 271 aaPredicted RBP8.67□□□□□ -1.02
CHMP6-203ENST00000572525 AURKBQ96GD4 344 aaPredicted RBP8.67□□□□□ -1.02
CHMP6-203ENST00000572525 C1orf147Q96MC9 270 aaPredicted RBP8.67□□□□□ -1.02
CHMP6-203ENST00000572525 ZNF385AQ96PM9 386 aaKnown RBP8.67□□□□□ -1.02
CHMP6-203ENST00000572525 KCNA7Q96RP8 456 aa8.67□□□□□ -1.02
CHMP6-203ENST00000572525 CITED1Q99966 193 aa8.67□□□□□ -1.02
CHMP6-203ENST00000572525 MRPL37Q9BZE1 423 aaKnown RBP8.67□□□□□ -1.02
CHMP6-203ENST00000572525 OR11A1Q9GZK7 315 aa8.67□□□□□ -1.02
CHMP6-203ENST00000572525 RBM38Q9H0Z9 239 aaKnown RBP8.67□□□□□ -1.02
CHMP6-203ENST00000572525 C7orf69Q9H7B7 122 aa8.67□□□□□ -1.02
CHMP6-203ENST00000572525 SEC61A2Q9H9S3 476 aa8.67□□□□□ -1.02
CHMP6-203ENST00000572525 C1orf109Q9NX04 203 aa8.67□□□□□ -1.02
CHMP6-203ENST00000572525 NKIRAS2Q9NYR9 191 aa8.67□□□□□ -1.02
CHMP6-203ENST00000572525 PLEK2Q9NYT0 353 aa8.67□□□□□ -1.02
CHMP6-203ENST00000572525 UBAP1Q9NZ09 502 aa8.67□□□□□ -1.02
CHMP6-203ENST00000572525 KCNE5Q9UJ90 142 aa8.67□□□□□ -1.02
CHMP6-203ENST00000572525 PAIP2BQ9ULR5 123 aaKnown RBP8.67□□□□□ -1.02
CHMP6-203ENST00000572525 TMED5Q9Y3A6 229 aa8.67□□□□□ -1.02
CHMP6-203ENST00000572525 RAP2CQ9Y3L5 183 aa8.67□□□□□ -1.02
CHMP6-203ENST00000572525 E9PBE3 544 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 FAAHO00519 579 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 HDAC3O15379 428 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 TRIM13O60858 407 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 SEC22BO75396 215 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 UGT2B17O75795 530 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 GPIP06744 558 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 CELA3BP08861 270 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 HOXB6P17509 224 aaKnown RBP8.66□□□□□ -1.02
CHMP6-203ENST00000572525 SDC1P18827 310 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 AQP4P55087 323 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 FOXA1P55317 472 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 TEKQ02763 1124 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 KLF10Q13118 480 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 FLOT2Q14254 428 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 OTUD3Q5T2D3 398 aaPredicted RBP8.66□□□□□ -1.02
CHMP6-203ENST00000572525 ANKRD26P1Q6NSI1 321 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 HACD2Q6Y1H2 254 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 FKBP9P1Q75LS8 142 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 MYPOPQ86VE0 399 aaPredicted RBP8.66□□□□□ -1.02
CHMP6-203ENST00000572525 ZNF563Q8TA94 476 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 OR5P2Q8WZ92 322 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 ASB9Q96DX5 294 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 CCDC126Q96EE4 140 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 ALKBH3Q96Q83 286 aaPredicted RBP8.66□□□□□ -1.02
CHMP6-203ENST00000572525 OR7D2Q96RA2 312 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 TRIM15Q9C019 465 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 ZNF350Q9GZX5 532 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 MUC13Q9H3R2 512 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 GSTO2Q9H4Y5 243 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 MID1IP1Q9NPA3 183 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 TCF7L2Q9NQB0 619 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 POLE3Q9NRF9 147 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 TESQ9UGI8 421 aaKnown RBP8.66□□□□□ -1.02
CHMP6-203ENST00000572525 ATP6V1HQ9UI12 483 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 NUP50Q9UKX7 468 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 RCE1Q9Y256 329 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 MYRFQ9Y2G1 1151 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 SH3GLB1Q9Y371 365 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 KCNE3Q9Y6H6 103 aa8.66□□□□□ -1.02
CHMP6-203ENST00000572525 A0A087WXM4 84 aa8.65□□□□□ -1.02
CHMP6-203ENST00000572525 TMED7-TICAM2A0A0A6YYA0 188 aa8.65□□□□□ -1.02
CHMP6-203ENST00000572525 PRSS51A0A1B0GVH4 220 aa8.65□□□□□ -1.02
CHMP6-203ENST00000572525 TMEM229AB2RXF0 380 aa8.65□□□□□ -1.02
CHMP6-203ENST00000572525 NR5A2O00482 541 aa8.65□□□□□ -1.02
CHMP6-203ENST00000572525 CYP7B1O75881 506 aa8.65□□□□□ -1.02
CHMP6-203ENST00000572525 NCR1O76036 304 aa8.65□□□□□ -1.02
CHMP6-203ENST00000572525 SMIM18P0DKX4 95 aa8.65□□□□□ -1.02
CHMP6-203ENST00000572525 MDKP21741 143 aaPredicted RBP8.65□□□□□ -1.02
CHMP6-203ENST00000572525 PEX2P28328 305 aa8.65□□□□□ -1.02
CHMP6-203ENST00000572525 RNF144AP50876 292 aaPredicted RBP8.65□□□□□ -1.02
CHMP6-203ENST00000572525 POLR2HP52434 150 aaKnown RBP8.65□□□□□ -1.02
CHMP6-203ENST00000572525 TP53BP2Q13625 1128 aa8.65□□□□□ -1.02
CHMP6-203ENST00000572525 FXNQ16595 210 aa8.65□□□□□ -1.02
CHMP6-203ENST00000572525 MSMPQ1L6U9 139 aa8.65□□□□□ -1.02
CHMP6-203ENST00000572525 PCGF3Q3KNV8 242 aa8.65□□□□□ -1.02
CHMP6-203ENST00000572525 ARHGAP11BQ3KRB8 267 aa8.65□□□□□ -1.02
CHMP6-203ENST00000572525 LSM12Q3MHD2 195 aaKnown RBP8.65□□□□□ -1.02
CHMP6-203ENST00000572525 FAM209AQ5JX71 171 aa8.65□□□□□ -1.02
CHMP6-203ENST00000572525 C9orf139Q6ZV77 190 aa8.65□□□□□ -1.02
CHMP6-203ENST00000572525 CREB3L2Q70SY1 520 aa8.65□□□□□ -1.02
CHMP6-203ENST00000572525 SATL1Q86VE3 508 aa8.65□□□□□ -1.02
CHMP6-203ENST00000572525 RETREG3Q86VR2 466 aa8.65□□□□□ -1.02
CHMP6-203ENST00000572525 CMIPQ8IY22 773 aa8.65□□□□□ -1.02
CHMP6-203ENST00000572525 TRIML2Q8N7C3 387 aa8.65□□□□□ -1.02
CHMP6-203ENST00000572525 FNDC8Q8TC99 324 aa8.65□□□□□ -1.02
CHMP6-203ENST00000572525 PYDC1Q8WXC3 89 aa8.65□□□□□ -1.02
CHMP6-203ENST00000572525 TBC1D23Q9NUY8 699 aa8.65□□□□□ -1.02
CHMP6-203ENST00000572525 PDP1Q9P0J1 537 aaPredicted RBP8.65□□□□□ -1.02
CHMP6-203ENST00000572525 GPR160Q9UJ42 338 aa8.65□□□□□ -1.02
CHMP6-203ENST00000572525 POLR3KQ9Y2Y1 108 aaPredicted RBP8.65□□□□□ -1.02
CHMP6-203ENST00000572525 TMED7Q9Y3B3 224 aa8.65□□□□□ -1.02
CHMP6-203ENST00000572525 LIPT2A6NK58 231 aa8.64□□□□□ -1.03
CHMP6-203ENST00000572525 TRIM64CA6NLI5 447 aa8.64□□□□□ -1.03
CHMP6-203ENST00000572525 SLC28A1O00337 649 aa8.64□□□□□ -1.03
CHMP6-203ENST00000572525 SCAMP2O15127 329 aaKnown RBP8.64□□□□□ -1.03
CHMP6-203ENST00000572525 TRAF3IP2O43734 574 aaPredicted RBP8.64□□□□□ -1.03
CHMP6-203ENST00000572525 AGR2O95994 175 aa8.64□□□□□ -1.03
CHMP6-203ENST00000572525 KNG1P01042 644 aa8.64□□□□□ -1.03
CHMP6-203ENST00000572525 UROSP10746 265 aa8.64□□□□□ -1.03
CHMP6-203ENST00000572525 FCGR1AP12314 374 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms