RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 PRPF19Q9UMS4 504 aaKnown RBP6.84□□□□□ -1.31
SMG6-211ENST00000572369 PLEKHA6Q9Y2H5 1048 aa6.84□□□□□ -1.31
SMG6-211ENST00000572369 AMDHD2Q9Y303 409 aa6.84□□□□□ -1.31
SMG6-211ENST00000572369 ENPP4Q9Y6X5 453 aa6.84□□□□□ -1.31
SMG6-211ENST00000572369 A0A096LPE4 126 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 A0A1W2PPZ6 126 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 HTR3EA5X5Y0 456 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 EFCAB9A8MZ26 197 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 M0R1B8 84 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 GYG2O15488 501 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 KLF4O43474 513 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 TRAF3IP2O43734 574 aaPredicted RBP6.83□□□□□ -1.32
SMG6-211ENST00000572369 FZD7O75084 574 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 UPK3AO75631 287 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 PDE5AO76074 875 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 GADD45GO95257 159 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 RAF1P04049 648 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 F13BP05160 661 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 INHBBP09529 407 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 ASAH2BP0C7U1 165 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 RHCEP18577 417 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 CSNK1A1P48729 337 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 SH3BGRP55822 239 aaPredicted RBP6.83□□□□□ -1.32
SMG6-211ENST00000572369 CLRN1P58418 232 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 SMIM11AP58511 58 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 PRPS1P60891 318 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 SPIBQ01892 262 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 RPL18Q07020 188 aaKnown RBP6.83□□□□□ -1.32
SMG6-211ENST00000572369 ZP4Q12836 540 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 CEACAM16Q2WEN9 425 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 DNAL1Q4LDG9 190 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 HIKESHIQ53FT3 197 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 MTX3Q5HYI7 312 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 TMEM108Q6UXF1 575 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 SLC46A3Q7Z3Q1 461 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 HDDC2Q7Z4H3 204 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 OAFQ86UD1 273 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 DHFR2Q86XF0 187 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 ZDHHC21Q8IVQ6 265 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 NRMQ8IXM6 262 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 RNF113BQ8IZP6 322 aaKnown RBP6.83□□□□□ -1.32
SMG6-211ENST00000572369 DEPDC4Q8N2C3 294 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 PIAS4Q8N2W9 510 aaPredicted RBP6.83□□□□□ -1.32
SMG6-211ENST00000572369 C17orf78Q8N4C9 275 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 FAM86B1Q8N7N1 296 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 C1orf162Q8NEQ5 155 aaPredicted RBP6.83□□□□□ -1.32
SMG6-211ENST00000572369 OR1K1Q8NGR3 316 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 OR52J3Q8NH60 311 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 ACOT11Q8WXI4 607 aaPredicted RBP6.83□□□□□ -1.32
SMG6-211ENST00000572369 CCDC124Q96CT7 223 aaKnown RBP6.83□□□□□ -1.32
SMG6-211ENST00000572369 ADAD1Q96M93 576 aaKnown RBP6.83□□□□□ -1.32
SMG6-211ENST00000572369 MUS81Q96NY9 551 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 HS3ST6Q96QI5 342 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 PIP5K1AQ99755 562 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 KCNS3Q9BQ31 491 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 THTPAQ9BU02 230 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 KRTAP17-1Q9BYP8 105 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 NDEL1Q9GZM8 345 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 C1orf21Q9H246 121 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 MUC13Q9H3R2 512 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 NMNAT1Q9HAN9 279 aaPredicted RBP6.83□□□□□ -1.32
SMG6-211ENST00000572369 CRLF2Q9HC73 371 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 GPR35Q9HC97 309 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 SLC17A5Q9NRA2 495 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 INIPQ9NRY2 104 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 TAS2R5Q9NYW4 299 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 ACTR3BQ9P1U1 418 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 ST6GALNAC2Q9UJ37 374 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 POU2F3Q9UKI9 436 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 AURKCQ9UQB9 309 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 TMEM5Q9Y2B1 443 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 POFUT2Q9Y2G5 429 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 RNF115Q9Y4L5 304 aa6.83□□□□□ -1.32
SMG6-211ENST00000572369 MAGED1Q9Y5V3 778 aaPredicted RBP6.83□□□□□ -1.32
SMG6-211ENST00000572369 HRNRQ86YZ3 2850 aaPredicted RBP6.83□□□□□ -1.32
SMG6-211ENST00000572369 A0A087WUU8 490 aa6.82□□□□□ -1.32
SMG6-211ENST00000572369 FAM171A2A8MVW0 826 aa6.82□□□□□ -1.32
SMG6-211ENST00000572369 FFAR1O14842 300 aa6.82□□□□□ -1.32
SMG6-211ENST00000572369 SIAH2O43255 324 aa6.82□□□□□ -1.32
SMG6-211ENST00000572369 SEC14L2O76054 403 aa6.82□□□□□ -1.32
SMG6-211ENST00000572369 ZNF432O94892 652 aa6.82□□□□□ -1.32
SMG6-211ENST00000572369 IGF2P01344 180 aa6.82□□□□□ -1.32
SMG6-211ENST00000572369 T-ENOLP0DO92 83 aa6.82□□□□□ -1.32
SMG6-211ENST00000572369 RPL4P36578 427 aaKnown RBP6.82□□□□□ -1.32
SMG6-211ENST00000572369 AQP2P41181 271 aa6.82□□□□□ -1.32
SMG6-211ENST00000572369 GPR4P46093 362 aa6.82□□□□□ -1.32
SMG6-211ENST00000572369 RASSF2P50749 326 aa6.82□□□□□ -1.32
SMG6-211ENST00000572369 DAP3P51398 398 aaKnown RBP6.82□□□□□ -1.32
SMG6-211ENST00000572369 ADAM8P78325 824 aa6.82□□□□□ -1.32
SMG6-211ENST00000572369 ARF1P84077 181 aaKnown RBP6.82□□□□□ -1.32
SMG6-211ENST00000572369 VLDLRP98155 873 aa6.82□□□□□ -1.32
SMG6-211ENST00000572369 PRKCDQ05655 676 aa6.82□□□□□ -1.32
SMG6-211ENST00000572369 CHRNB3Q05901 458 aa6.82□□□□□ -1.32
SMG6-211ENST00000572369 BSPH1Q075Z2 132 aa6.82□□□□□ -1.32
SMG6-211ENST00000572369 TOP3AQ13472 1001 aaPredicted RBP6.82□□□□□ -1.32
SMG6-211ENST00000572369 TRIM25Q14258 630 aaKnown RBP6.82□□□□□ -1.32
SMG6-211ENST00000572369 LAPTM4AQ15012 233 aa6.82□□□□□ -1.32
SMG6-211ENST00000572369 TBRG1Q3YBR2 411 aa6.82□□□□□ -1.32
SMG6-211ENST00000572369 ALG10Q5BKT4 473 aa6.82□□□□□ -1.32
SMG6-211ENST00000572369 NCMAPQ5T1S8 102 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms