RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 SLC28A1O00337 649 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 RTCAO00442 366 aaKnown RBP3.4□□□□□ -1.87
NUP88-202ENST00000570937 MANBAO00462 879 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 PLPP1O14494 284 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 TM9SF1O15321 606 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 BIRC5O15392 142 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 PLIN3O60664 434 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 DNAJB6O75190 326 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 SH3BGRLO75368 114 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 OR4F21O95013 312 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 GPR75O95800 540 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 PDYNP01213 254 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 SLC35E2P0CK97 266 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 UROSP10746 265 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 NEFHP12036 1026 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 CSNK2A2P19784 350 aaPredicted RBP3.4□□□□□ -1.87
NUP88-202ENST00000570937 MPIP34949 423 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 NAGLUP54802 743 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 SLC26A5P58743 744 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 PSPHP78330 225 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 TNFRSF17Q02223 184 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 OC90Q02509 493 aaPredicted RBP3.4□□□□□ -1.87
NUP88-202ENST00000570937 DMTNQ08495 405 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 HEPACAMQ14CZ8 416 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 IMPG1Q17R60 797 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 NADK2Q4G0N4 442 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 PHLDA2Q53GA4 152 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 UNC50Q53HI1 259 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 SYT14P1Q58G82 188 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 OR52E8Q6IFG1 317 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 RPUSD3Q6P087 351 aaKnown RBP3.4□□□□□ -1.87
NUP88-202ENST00000570937 HSDL2Q6YN16 418 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 LANCL3Q6ZV70 420 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 LACC1Q8IV20 430 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 NUDCD3Q8IVD9 361 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 DND1Q8IYX4 353 aaKnown RBP3.4□□□□□ -1.87
NUP88-202ENST00000570937 ST13P4Q8IZP2 240 aaPredicted RBP3.4□□□□□ -1.87
NUP88-202ENST00000570937 CLYBLQ8N0X4 340 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 C4orf33Q8N1A6 199 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 METTL4Q8N3J2 472 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 TMEM156Q8N614 296 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 BCORP1Q8N888 145 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 BANPQ8N9N5 519 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 OR11H4Q8NGC9 324 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 OR4K14Q8NGD5 310 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 OR8K3Q8NH51 312 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 SSMEM1Q8WWF3 244 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 ZNRF4Q8WWF5 429 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 PSMF1Q92530 271 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 TSLPQ969D9 159 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 PGM2Q96G03 612 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 TMEM237Q96Q45 408 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 MAPKAP1Q9BPZ7 522 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 OR8D2Q9GZM6 311 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 CLMPQ9H6B4 373 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 ARGLU1Q9NWB6 273 aaPredicted RBP3.4□□□□□ -1.87
NUP88-202ENST00000570937 FBXW2Q9UKT8 454 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 PCDHGB4Q9UN71 923 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 PPIEQ9UNP9 301 aaKnown RBP3.4□□□□□ -1.87
NUP88-202ENST00000570937 CFL2Q9Y281 166 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 YARS2Q9Y2Z4 477 aaKnown RBP3.4□□□□□ -1.87
NUP88-202ENST00000570937 ATG4BQ9Y4P1 393 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 SNX8Q9Y5X2 465 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 ZNF780BQ9Y6R6 833 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 SEC16AO15027 2179 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 PIEZO2Q9H5I5 2752 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 IGLV7-46A0A075B6I9 117 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 A0A0A6YYD5 115 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 TRBV11-1A0A0K0K1C0 115 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 GABRR3A8MPY1 467 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 TMEM114B3SHH9 223 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 AZIN1O14977 448 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 SPAG7O75391 227 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 SEC22BO75396 215 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 CRLF1O75462 422 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 EEDO75530 441 aaKnown RBP3.39□□□□□ -1.87
NUP88-202ENST00000570937 BCAS2O75934 225 aaPredicted RBP3.39□□□□□ -1.87
NUP88-202ENST00000570937 SORBS2O94875 1100 aaKnown RBP3.39□□□□□ -1.87
NUP88-202ENST00000570937 GBAP04062 536 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 BPGMP07738 259 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 FGF4P08620 206 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 SPTBP11277 2137 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 TSPAN8P19075 237 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 TMED10P49755 219 aaKnown RBP3.39□□□□□ -1.87
NUP88-202ENST00000570937 HLCSP50747 726 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 SSR4P51571 173 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 XKP51811 444 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 MLF1P58340 268 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 RPP38P78345 283 aaKnown RBP3.39□□□□□ -1.87
NUP88-202ENST00000570937 IGLV3-21P80748 117 aaPredicted RBP3.39□□□□□ -1.87
NUP88-202ENST00000570937 FOLH1Q04609 750 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 RBPJQ06330 500 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 OR1C1Q15619 314 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 SNAPC1Q16533 368 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 ODF4Q2M2E3 257 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 HHATQ5VTY9 493 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 ADNP2Q6IQ32 1131 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 SLC48A1Q6P1K1 146 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 OPN5Q6U736 354 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 COMMD6Q7Z4G1 85 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms