RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 C16orf89Q6UX73 402 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 DPY19L4Q7Z388 723 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 GOLGA7Q7Z5G4 137 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 NRARPQ7Z6K4 114 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 RAB44Q7Z6P3 723 aaPredicted RBP3.23□□□□□ -1.89
SMG6-208ENST00000570874 ADGRE4PQ86SQ3 457 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 DHDDSQ86SQ9 333 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 GPAT4Q86UL3 456 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 SATL1Q86VE3 508 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 NAXDQ8IW45 347 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 PUSL1Q8N0Z8 303 aaKnown RBP3.23□□□□□ -1.89
SMG6-208ENST00000570874 SYS1Q8N2H4 156 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 TMEM132CQ8N3T6 1108 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 TMEM156Q8N614 296 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 CPSF7Q8N684 471 aaKnown RBP3.23□□□□□ -1.89
SMG6-208ENST00000570874 ZNF655Q8N720 491 aaPredicted RBP3.23□□□□□ -1.89
SMG6-208ENST00000570874 PLA2G15Q8NCC3 412 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 OR52B6Q8NGF0 335 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 OR2T11Q8NH01 316 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 PHOSPHO1Q8TCT1 267 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 DYNC2LI1Q8TCX1 351 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 PHF10Q8WUB8 498 aaKnown RBP3.23□□□□□ -1.89
SMG6-208ENST00000570874 ASB11Q8WXH4 323 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 OR8D1Q8WZ84 308 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 SUSD6Q92537 303 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 NPIPB3Q92617 1050 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 POP5Q969H6 163 aaKnown RBP3.23□□□□□ -1.89
SMG6-208ENST00000570874 YIPF5Q969M3 257 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 GTPBP3Q969Y2 492 aaKnown RBP3.23□□□□□ -1.89
SMG6-208ENST00000570874 ELSPBP1Q96BH3 223 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 BIRC7Q96CA5 298 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 ZG16BQ96DA0 208 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 L3HYPDHQ96EM0 354 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 PDXPQ96GD0 296 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 FAM210BQ96KR6 192 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 ZNF641Q96N77 438 aaPredicted RBP3.23□□□□□ -1.89
SMG6-208ENST00000570874 FANCD2OSQ96PS1 177 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 RASL10BQ96S79 203 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 HBEGFQ99075 208 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 CDCA3Q99618 268 aaPredicted RBP3.23□□□□□ -1.89
SMG6-208ENST00000570874 C12orf57Q99622 126 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 C17orf62Q9BQA9 187 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 LMF2Q9BU23 707 aaKnown RBP3.23□□□□□ -1.89
SMG6-208ENST00000570874 TRMOQ9BU70 441 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 ZNF426Q9BUY5 554 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 TMED9Q9BVK6 235 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 ERVK-6Q9BXR3 956 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 MRPS26Q9BYN8 205 aaKnown RBP3.23□□□□□ -1.89
SMG6-208ENST00000570874 SLC19A3Q9BZV2 496 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 UCK2Q9BZX2 261 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 CCDC90BQ9GZT6 254 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 WWTR1Q9GZV5 400 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 ILKAPQ9H0C8 392 aaPredicted RBP3.23□□□□□ -1.89
SMG6-208ENST00000570874 PRO3102Q9H379 93 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 ZNF385DQ9H6B1 395 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 PPP1R3EQ9H7J1 279 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 ZNF696Q9H7X3 374 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 MARCH7Q9H992 704 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 POPDC3Q9HBV1 291 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 S100A14Q9HCY8 104 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 RAB18Q9NP72 206 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 RAB9BQ9NP90 201 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 MYNNQ9NPC7 610 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 KRCC1Q9NPI7 259 aaPredicted RBP3.23□□□□□ -1.89
SMG6-208ENST00000570874 TRIM36Q9NQ86 728 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 NANSQ9NR45 359 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 NECAP2Q9NVZ3 263 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 GIN1Q9NXP7 522 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 DEC1Q9P2X7 70 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 THAP10Q9P2Z0 257 aaPredicted RBP3.23□□□□□ -1.89
SMG6-208ENST00000570874 KLQ9UEF7 1012 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 SMPXQ9UHP9 88 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 BTNL2Q9UIR0 455 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 GNPTGQ9UJJ9 305 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 PCTPQ9UKL6 214 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 GSTK1Q9Y2Q3 226 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 LRP12Q9Y561 859 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 MTCH2Q9Y6C9 303 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 EXPH5Q8NEV8 1989 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 SDK1Q7Z5N4 2213 aa3.23□□□□□ -1.89
SMG6-208ENST00000570874 TRIOBPQ9H2D6 2365 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 SZT2Q5T011 3432 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 IGLV3-16A0A075B6K0 115 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 A0A087X0K7 114 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 CXorf51AA0A1B0GTR3 108 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 FRG2CA6NGY1 282 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 NKX6-3A6NJ46 265 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 ANHXE9PGG2 379 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 H3BNH8 94 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 TXNDC9O14530 226 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 FFAR3O14843 346 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 GPR42O15529 346 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 OR1F1O43749 312 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 PRKRAO75569 313 aaKnown RBP3.22□□□□□ -1.89
SMG6-208ENST00000570874 TOX4O94842 621 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 ZNF205O95201 554 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 KLF8O95600 359 aaPredicted RBP3.22□□□□□ -1.89
SMG6-208ENST00000570874 WNT11O96014 354 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 SERPINA1P01009 418 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 IFNA21P01568 189 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms