RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 OR8S1Q8NH09 359 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.06□□□□□ -0.16
SMG6-207ENST00000570756 DUSP22Q9NRW4 184 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 KCNE5Q9UJ90 142 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 MKL2Q9ULH7 1088 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 EDARQ9UNE0 448 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 ENTPD2Q9Y5L3 495 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 TRAV18A0A075B6X5 111 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 TRBV5-5A0A0J9YX44 114 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 SULT1C2O00338 296 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 RPP14O95059 124 aaKnown RBP14.06□□□□□ -0.16
SMG6-207ENST00000570756 AK1P00568 194 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 MAS1P04201 325 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 SPP1P10451 314 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 GUCA2AQ02747 115 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 TAF13Q15543 124 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 H3F3CQ6NXT2 135 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 TMED4Q7Z7H5 227 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 SKA3Q8IX90 412 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 DMBX1Q8NFW5 382 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 ARL11Q969Q4 196 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 NMNAT3Q96T66 252 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 SFXN1Q9H9B4 322 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 RXFP3Q9NSD7 469 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 WSB2Q9NYS7 404 aaPredicted RBP14.06□□□□□ -0.16
SMG6-207ENST00000570756 MYEF2Q9P2K5 600 aaKnown RBP14.06□□□□□ -0.16
SMG6-207ENST00000570756 SZT2Q5T011 3432 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 OR6C68A6NDL8 312 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 OR2AT4A6NND4 320 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 MCIDASD6RGH6 385 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 F5H0A9 414 aaPredicted RBP14.05□□□□□ -0.16
SMG6-207ENST00000570756 IMPA2O14732 288 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 CDC40O60508 579 aaKnown RBP eCLIP14.05□□□□□ -0.16
SMG6-207ENST00000570756 SRPX2O60687 465 aaPredicted RBP14.05□□□□□ -0.16
SMG6-207ENST00000570756 ADCYAP1P18509 176 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 CD34P28906 385 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 TMEM52BQ4KMG9 183 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 ALG10BQ5I7T1 473 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 ZNF684Q5T5D7 378 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 YOD1Q5VVQ6 348 aaPredicted RBP14.05□□□□□ -0.16
SMG6-207ENST00000570756 DPY19L2P2Q6ZN68 376 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 GABRG1Q8N1C3 465 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 CDRT4Q8N9R6 151 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 NPEPL1Q8NDH3 523 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 OR8D1Q8WZ84 308 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 GAL3ST3Q96A11 431 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 CCDC74AQ96AQ1 378 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 TRIM2Q9C040 744 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 ADAP2Q9NPF8 381 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 C19orf53Q9UNZ5 99 aaPredicted RBP14.05□□□□□ -0.16
SMG6-207ENST00000570756 A0A1B0GVT2 93 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 RNF222A6NCQ9 220 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 GLCEO94923 617 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 GRPRP30550 384 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 GPR143P51810 404 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 HTRA4P83105 476 aaPredicted RBP14.05□□□□□ -0.16
SMG6-207ENST00000570756 PLA2G7Q13093 441 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 TEAD2Q15562 447 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 MLF2Q15773 248 aaPredicted RBP14.05□□□□□ -0.16
SMG6-207ENST00000570756 TMEM205Q6UW68 189 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 INO80EQ8NBZ0 244 aaPredicted RBP14.05□□□□□ -0.16
SMG6-207ENST00000570756 OR2L3Q8NG85 312 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 ZNRF4Q8WWF5 429 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 INSM2Q96T92 566 aaPredicted RBP14.05□□□□□ -0.16
SMG6-207ENST00000570756 STACQ99469 402 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 TRPV4Q9HBA0 871 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 FLRT3Q9NZU0 649 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 ADAM18Q9Y3Q7 739 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 CHD9Q3L8U1 2897 aa14.05□□□□□ -0.16
SMG6-207ENST00000570756 MEIS3P1A6NDR6 274 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 TMEM200CA6NKL6 621 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 FAM25EA8MYX2 175 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 RDH16O75452 317 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 RAB3DO95716 219 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 WNT11O96014 354 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 HEXAP06865 529 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 NGFRP08138 427 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 SMIM6P0DI80 62 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 DDX6P26196 483 aaKnown RBP eCLIP14.04□□□□□ -0.16
SMG6-207ENST00000570756 AKR1C2P52895 323 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 CDK3Q00526 305 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 AKR1C1Q04828 323 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 IGSF11Q5DX21 431 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 NKAIN2Q5VXU1 208 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 ZNF813Q6ZN06 617 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 DEFB128Q7Z7B8 93 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 GTPBP8Q8N3Z3 284 aaPredicted RBP14.04□□□□□ -0.16
SMG6-207ENST00000570756 DVL3Q92997 716 aaPredicted RBP14.04□□□□□ -0.16
SMG6-207ENST00000570756 RNF166Q96A37 237 aaPredicted RBP14.04□□□□□ -0.16
SMG6-207ENST00000570756 Q96M85 177 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 CNTNAP3BQ96NU0 1288 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 CMSS1Q9BQ75 279 aaKnown RBP14.04□□□□□ -0.16
SMG6-207ENST00000570756 NMNAT2Q9BZQ4 307 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 COMMD4Q9H0A8 199 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 SLC17A5Q9NRA2 495 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 YBX2Q9Y2T7 364 aaKnown RBP14.04□□□□□ -0.16
SMG6-207ENST00000570756 CCDC85CA6NKD9 419 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 S100A9P06702 114 aaKnown RBP14.04□□□□□ -0.16
SMG6-207ENST00000570756 C8AP07357 584 aa14.04□□□□□ -0.16
SMG6-207ENST00000570756 CSRP1P21291 193 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms