RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 GLRXP35754 106 aa10.33□□□□□ -0.76
CAPN3-220ENST00000569827 LMO4P61968 165 aa10.33□□□□□ -0.76
CAPN3-220ENST00000569827 TXNL4AP83876 142 aaKnown RBP10.33□□□□□ -0.76
CAPN3-220ENST00000569827 GALK2Q01415 458 aa10.33□□□□□ -0.76
CAPN3-220ENST00000569827 SLC9B1Q4ZJI4 515 aa10.33□□□□□ -0.76
CAPN3-220ENST00000569827 ALG10BQ5I7T1 473 aa10.33□□□□□ -0.76
CAPN3-220ENST00000569827 H1FNTQ75WM6 255 aaPredicted RBP10.33□□□□□ -0.76
CAPN3-220ENST00000569827 OR6N1Q8NGY5 312 aa10.33□□□□□ -0.76
CAPN3-220ENST00000569827 NFKBIDQ8NI38 313 aa10.33□□□□□ -0.76
CAPN3-220ENST00000569827 ZNF418Q8TF45 676 aaPredicted RBP10.33□□□□□ -0.76
CAPN3-220ENST00000569827 SLC38A4Q969I6 547 aa10.33□□□□□ -0.76
CAPN3-220ENST00000569827 ULBP2Q9BZM5 246 aa10.33□□□□□ -0.76
CAPN3-220ENST00000569827 CACYBPQ9HB71 228 aaKnown RBP10.33□□□□□ -0.76
CAPN3-220ENST00000569827 ESM1Q9NQ30 184 aa10.33□□□□□ -0.76
CAPN3-220ENST00000569827 POFUT2Q9Y2G5 429 aa10.33□□□□□ -0.76
CAPN3-220ENST00000569827 CACNG2Q9Y698 323 aa10.33□□□□□ -0.76
CAPN3-220ENST00000569827 TRAV36DV7A0A075B6V5 113 aa10.32□□□□□ -0.76
CAPN3-220ENST00000569827 A0A087WUJ7 227 aa10.32□□□□□ -0.76
CAPN3-220ENST00000569827 RGS16O15492 202 aaPredicted RBP10.32□□□□□ -0.76
CAPN3-220ENST00000569827 AKAP8O43823 692 aaKnown RBP10.32□□□□□ -0.76
CAPN3-220ENST00000569827 FZD7O75084 574 aa10.32□□□□□ -0.76
CAPN3-220ENST00000569827 RAB36O95755 333 aa10.32□□□□□ -0.76
CAPN3-220ENST00000569827 PNPP00491 289 aa10.32□□□□□ -0.76
CAPN3-220ENST00000569827 TFP02787 698 aa10.32□□□□□ -0.76
CAPN3-220ENST00000569827 BGLAPP02818 100 aa10.32□□□□□ -0.76
CAPN3-220ENST00000569827 HILS1P60008 231 aa10.32□□□□□ -0.76
CAPN3-220ENST00000569827 RAB1AP62820 205 aa10.32□□□□□ -0.76
CAPN3-220ENST00000569827 CCL8P80075 99 aa10.32□□□□□ -0.76
CAPN3-220ENST00000569827 RGNQ15493 299 aa10.32□□□□□ -0.76
CAPN3-220ENST00000569827 FXNQ16595 210 aa10.32□□□□□ -0.76
CAPN3-220ENST00000569827 NKPD1Q17RQ9 610 aa10.32□□□□□ -0.76
CAPN3-220ENST00000569827 PDCD4Q53EL6 469 aaKnown RBP10.32□□□□□ -0.76
CAPN3-220ENST00000569827 SLC2A7Q6PXP3 512 aa10.32□□□□□ -0.76
CAPN3-220ENST00000569827 C6orf89Q6UWU4 347 aa10.32□□□□□ -0.76
CAPN3-220ENST00000569827 MAVSQ7Z434 540 aa10.32□□□□□ -0.76
CAPN3-220ENST00000569827 SKA3Q8IX90 412 aa10.32□□□□□ -0.76
CAPN3-220ENST00000569827 C10orf53Q8N6V4 93 aa10.32□□□□□ -0.76
CAPN3-220ENST00000569827 ICA1LQ8NDH6 482 aa10.32□□□□□ -0.76
CAPN3-220ENST00000569827 ANKK1Q8NFD2 765 aa10.32□□□□□ -0.76
CAPN3-220ENST00000569827 MGARPQ8TDB4 240 aa10.32□□□□□ -0.76
CAPN3-220ENST00000569827 OR52B2Q96RD2 323 aa10.32□□□□□ -0.76
CAPN3-220ENST00000569827 FOXB1Q99853 325 aa10.32□□□□□ -0.76
CAPN3-220ENST00000569827 C1QTNF5Q9BXJ0 243 aa10.32□□□□□ -0.76
CAPN3-220ENST00000569827 MS4A5Q9H3V2 200 aa10.32□□□□□ -0.76
CAPN3-220ENST00000569827 MOV10Q9HCE1 1003 aaKnown RBP10.32□□□□□ -0.76
CAPN3-220ENST00000569827 G6PC2Q9NQR9 355 aa10.32□□□□□ -0.76
CAPN3-220ENST00000569827 TAAR3PQ9P1P4 343 aa10.32□□□□□ -0.76
CAPN3-220ENST00000569827 TMEM89A2RUT3 159 aa10.31□□□□□ -0.76
CAPN3-220ENST00000569827 TMEM247A6NEH6 219 aa10.31□□□□□ -0.76
CAPN3-220ENST00000569827 PLPP2O43688 288 aa10.31□□□□□ -0.76
CAPN3-220ENST00000569827 SLC22A3O75751 556 aa10.31□□□□□ -0.76
CAPN3-220ENST00000569827 MPZL1O95297 269 aa10.31□□□□□ -0.76
CAPN3-220ENST00000569827 AHCYP23526 432 aa10.31□□□□□ -0.76
CAPN3-220ENST00000569827 AQP1P29972 269 aa10.31□□□□□ -0.76
CAPN3-220ENST00000569827 COMPP49747 757 aaPredicted RBP10.31□□□□□ -0.76
CAPN3-220ENST00000569827 MELKQ14680 651 aa10.31□□□□□ -0.76
CAPN3-220ENST00000569827 AWAT1Q58HT5 328 aa10.31□□□□□ -0.76
CAPN3-220ENST00000569827 WDR88Q6ZMY6 472 aa10.31□□□□□ -0.76
CAPN3-220ENST00000569827 IL17RDQ8NFM7 739 aa10.31□□□□□ -0.76
CAPN3-220ENST00000569827 TAF15Q92804 592 aaKnown RBP eCLIP10.31□□□□□ -0.76
CAPN3-220ENST00000569827 ITCHQ96J02 903 aa10.31□□□□□ -0.76
CAPN3-220ENST00000569827 DUX5Q96PT3 197 aa10.31□□□□□ -0.76
CAPN3-220ENST00000569827 SH3GL3Q99963 347 aa10.31□□□□□ -0.76
CAPN3-220ENST00000569827 TMPRSS13Q9BYE2 586 aa10.31□□□□□ -0.76
CAPN3-220ENST00000569827 PAIP1Q9H074 479 aaKnown RBP10.31□□□□□ -0.76
CAPN3-220ENST00000569827 ARMC7Q9H6L4 198 aa10.31□□□□□ -0.76
CAPN3-220ENST00000569827 ZNF665Q9H7R5 613 aa10.31□□□□□ -0.76
CAPN3-220ENST00000569827 IFT52Q9Y366 437 aa10.31□□□□□ -0.76
CAPN3-220ENST00000569827 PPIAL4AQ9Y536 164 aa10.31□□□□□ -0.76
CAPN3-220ENST00000569827 PCDHGB1Q9Y5G3 927 aa10.31□□□□□ -0.76
CAPN3-220ENST00000569827 WNK1Q9H4A3 2382 aa10.31□□□□□ -0.76
CAPN3-220ENST00000569827 A0A0A6YYJ9 748 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 ZNF726A6NNF4 738 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 C5orf58C9J3I9 102 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 SLCO1B7G3V0H7 640 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 TRIM77I1YAP6 450 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 CLIC1O00299 241 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 TM9SF1O15321 606 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 HDAC3O15379 428 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 OR2T1O43869 369 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 TPST2O60704 377 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 IL6P05231 212 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 CSNK1A1P48729 337 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 EVX1P49640 407 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 POLR2JP52435 117 aaKnown RBP10.3□□□□□ -0.76
CAPN3-220ENST00000569827 BIDP55957 195 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 WDR4P57081 412 aaKnown RBP10.3□□□□□ -0.76
CAPN3-220ENST00000569827 PUDPQ08623 228 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 LRRC74AQ0VAA2 488 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 PMS2P3Q13401 168 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 OR1Q1Q15612 314 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 TSTQ16762 297 aaKnown RBP10.3□□□□□ -0.76
CAPN3-220ENST00000569827 HHATQ5VTY9 493 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 RGS7BPQ6MZT1 257 aaPredicted RBP10.3□□□□□ -0.76
CAPN3-220ENST00000569827 UGT2A3Q6UWM9 527 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 NHLRC1Q6VVB1 395 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 CCDC36Q8IYA8 594 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 GLB1L3Q8NCI6 653 aaPredicted RBP10.3□□□□□ -0.76
CAPN3-220ENST00000569827 BBS10Q8TAM1 723 aa10.3□□□□□ -0.76
CAPN3-220ENST00000569827 FAM216AQ8WUB2 273 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms