RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 CALB2P22676 271 aa12.09□□□□□ -0.47
HERPUD1-218ENST00000569569 CD40P25942 277 aa12.09□□□□□ -0.47
HERPUD1-218ENST00000569569 MSX2P35548 267 aaPredicted RBP12.09□□□□□ -0.47
HERPUD1-218ENST00000569569 UBE2NP61088 152 aaKnown RBP12.09□□□□□ -0.47
HERPUD1-218ENST00000569569 ARF1P84077 181 aaKnown RBP12.09□□□□□ -0.47
HERPUD1-218ENST00000569569 RPL18Q07020 188 aaKnown RBP12.09□□□□□ -0.47
HERPUD1-218ENST00000569569 ZNF672Q499Z4 452 aaPredicted RBP12.09□□□□□ -0.47
HERPUD1-218ENST00000569569 PHYHD1Q5SRE7 291 aa12.09□□□□□ -0.47
HERPUD1-218ENST00000569569 RBM15BQ8NDT2 890 aaKnown RBP12.09□□□□□ -0.47
HERPUD1-218ENST00000569569 OR6N1Q8NGY5 312 aa12.09□□□□□ -0.47
HERPUD1-218ENST00000569569 ACOT11Q8WXI4 607 aaPredicted RBP12.09□□□□□ -0.47
HERPUD1-218ENST00000569569 FBXW5Q969U6 566 aa12.09□□□□□ -0.47
HERPUD1-218ENST00000569569 BPIFA2Q96DR5 249 aa12.09□□□□□ -0.47
HERPUD1-218ENST00000569569 MAN2C1Q9NTJ4 1040 aa12.09□□□□□ -0.47
HERPUD1-218ENST00000569569 FAM32AQ9Y421 112 aaKnown RBP12.09□□□□□ -0.47
HERPUD1-218ENST00000569569 CELSR1Q9NYQ6 3014 aa12.09□□□□□ -0.47
HERPUD1-218ENST00000569569 A0A096LPE4 126 aa12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 ARPC4-TTLL3A0A0A6YYG9 625 aa12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 A0A1W2PPZ6 126 aa12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 A0A1W2PRG6 482 aa12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 ZNF99A8MXY4 864 aaPredicted RBP12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 M0R1B8 84 aa12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 PIP5K1CO60331 668 aa12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 BCL10O95999 233 aa12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 TSPAN19P0C672 248 aa12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 RHCEP18577 417 aa12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 FUT4P22083 530 aa12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 AQP2P41181 271 aa12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 CSNK1A1P48729 337 aa12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 PRKCDQ05655 676 aa12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 RRM2BQ7LG56 351 aa12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 TSEN54Q7Z6J9 526 aaKnown RBP12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 WDFY1Q8IWB7 410 aa12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 NRMQ8IXM6 262 aa12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 CDK20Q8IZL9 346 aa12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 ARHGAP24Q8N264 748 aa12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 DEPDC4Q8N2C3 294 aa12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 KBTBD8Q8NFY9 601 aa12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 BCAS4Q8TDM0 211 aa12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 ZNF837Q96EG3 531 aaPredicted RBP12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 SLC25A44Q96H78 314 aaPredicted RBP12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 PYURFQ96I23 114 aa12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 C7orf34Q96L11 122 aa12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 NSMCE2Q96MF7 247 aa12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 NELFAQ9H3P2 528 aa12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 ANKRD19PQ9H560 264 aa12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 NMNAT1Q9HAN9 279 aaPredicted RBP12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 INIPQ9NRY2 104 aa12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 CISD1Q9NZ45 108 aaKnown RBP12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 NDUFAF4Q9P032 175 aa12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 HIVEP1P15822 2718 aa12.08□□□□□ -0.48
HERPUD1-218ENST00000569569 A0A087WUU8 490 aa12.07□□□□□ -0.48
HERPUD1-218ENST00000569569 SHISA9B4DS77 424 aa12.07□□□□□ -0.48
HERPUD1-218ENST00000569569 ARPC2O15144 300 aa12.07□□□□□ -0.48
HERPUD1-218ENST00000569569 SMPD2O60906 423 aa12.07□□□□□ -0.48
HERPUD1-218ENST00000569569 TMCC2O75069 709 aa12.07□□□□□ -0.48
HERPUD1-218ENST00000569569 F13BP05160 661 aa12.07□□□□□ -0.48
HERPUD1-218ENST00000569569 T-ENOLP0DO92 83 aa12.07□□□□□ -0.48
HERPUD1-218ENST00000569569 ITGA2P17301 1181 aa12.07□□□□□ -0.48
HERPUD1-218ENST00000569569 LSM11P83369 360 aaKnown RBP eCLIP12.07□□□□□ -0.48
HERPUD1-218ENST00000569569 VLDLRP98155 873 aa12.07□□□□□ -0.48
HERPUD1-218ENST00000569569 MELKQ14680 651 aa12.07□□□□□ -0.48
HERPUD1-218ENST00000569569 LAPTM4AQ15012 233 aa12.07□□□□□ -0.48
HERPUD1-218ENST00000569569 ZNF730Q6ZMV8 503 aa12.07□□□□□ -0.48
HERPUD1-218ENST00000569569 MBOAT2Q6ZWT7 520 aa12.07□□□□□ -0.48
HERPUD1-218ENST00000569569 CCDC36Q8IYA8 594 aa12.07□□□□□ -0.48
HERPUD1-218ENST00000569569 LRRC75A-AS1Q8N1F1 130 aa12.07□□□□□ -0.48
HERPUD1-218ENST00000569569 FAM86B1Q8N7N1 296 aa12.07□□□□□ -0.48
HERPUD1-218ENST00000569569 TMEM171Q8WVE6 324 aa12.07□□□□□ -0.48
HERPUD1-218ENST00000569569 IGFBPL1Q8WX77 278 aa12.07□□□□□ -0.48
HERPUD1-218ENST00000569569 NEUROG1Q92886 237 aa12.07□□□□□ -0.48
HERPUD1-218ENST00000569569 TMEM54Q969K7 222 aa12.07□□□□□ -0.48
HERPUD1-218ENST00000569569 ZNF566Q969W8 418 aa12.07□□□□□ -0.48
HERPUD1-218ENST00000569569 ULBP2Q9BZM5 246 aa12.07□□□□□ -0.48
HERPUD1-218ENST00000569569 MOV10Q9HCE1 1003 aaKnown RBP12.07□□□□□ -0.48
HERPUD1-218ENST00000569569 GLTPQ9NZD2 209 aa12.07□□□□□ -0.48
HERPUD1-218ENST00000569569 POFUT2Q9Y2G5 429 aa12.07□□□□□ -0.48
HERPUD1-218ENST00000569569 HIF3AQ9Y2N7 669 aa12.07□□□□□ -0.48
HERPUD1-218ENST00000569569 RTTNQ86VV8 2226 aa12.07□□□□□ -0.48
HERPUD1-218ENST00000569569 VPS13CQ709C8 3753 aa12.06□□□□□ -0.48
HERPUD1-218ENST00000569569 A0A1W2PRQ8 180 aa12.06□□□□□ -0.48
HERPUD1-218ENST00000569569 MCIDASD6RGH6 385 aa12.06□□□□□ -0.48
HERPUD1-218ENST00000569569 hCG_2039718K7EN88 272 aa12.06□□□□□ -0.48
HERPUD1-218ENST00000569569 H1F0P07305 194 aaKnown RBP12.06□□□□□ -0.48
HERPUD1-218ENST00000569569 DANCRP0C864 163 aa12.06□□□□□ -0.48
HERPUD1-218ENST00000569569 SAGP10523 405 aaPredicted RBP12.06□□□□□ -0.48
HERPUD1-218ENST00000569569 MAKP20794 623 aa12.06□□□□□ -0.48
HERPUD1-218ENST00000569569 SLC9A3P48764 834 aa12.06□□□□□ -0.48
HERPUD1-218ENST00000569569 DGCR6Q14129 220 aa12.06□□□□□ -0.48
HERPUD1-218ENST00000569569 ANKDD1AQ495B1 522 aa12.06□□□□□ -0.48
HERPUD1-218ENST00000569569 ALG10Q5BKT4 473 aa12.06□□□□□ -0.48
HERPUD1-218ENST00000569569 TBPL2Q6SJ96 375 aa12.06□□□□□ -0.48
HERPUD1-218ENST00000569569 SLC22A25Q6T423 547 aa12.06□□□□□ -0.48
HERPUD1-218ENST00000569569 RINLQ6ZS11 566 aa12.06□□□□□ -0.48
HERPUD1-218ENST00000569569 ZNF627Q7L945 461 aa12.06□□□□□ -0.48
HERPUD1-218ENST00000569569 HDDC2Q7Z4H3 204 aa12.06□□□□□ -0.48
HERPUD1-218ENST00000569569 MOSPD2Q8NHP6 518 aa12.06□□□□□ -0.48
HERPUD1-218ENST00000569569 SLC7A13Q8TCU3 470 aa12.06□□□□□ -0.48
HERPUD1-218ENST00000569569 SMAP2Q8WU79 429 aaPredicted RBP12.06□□□□□ -0.48
HERPUD1-218ENST00000569569 MCUR1Q96AQ8 359 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms