RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 RNF13O43567 381 aa17.52■□□□□ 0.4
ABCA3-206ENST00000569062 OR5F1O95221 314 aa17.52■□□□□ 0.4
ABCA3-206ENST00000569062 IGKV3-15P01624 115 aa17.52■□□□□ 0.4
ABCA3-206ENST00000569062 IGLV1-44P01699 117 aa17.52■□□□□ 0.4
ABCA3-206ENST00000569062 PAX7P23759 505 aa17.52■□□□□ 0.4
ABCA3-206ENST00000569062 APOBEC3AP31941 199 aaPredicted RBP17.52■□□□□ 0.4
ABCA3-206ENST00000569062 SELENOWP63302 87 aa17.52■□□□□ 0.4
ABCA3-206ENST00000569062 NAAAQ02083 359 aa17.52■□□□□ 0.4
ABCA3-206ENST00000569062 LIPEQ05469 1076 aa17.52■□□□□ 0.4
ABCA3-206ENST00000569062 MELKQ14680 651 aa17.52■□□□□ 0.4
ABCA3-206ENST00000569062 C8orf82Q6P1X6 216 aaPredicted RBP17.52■□□□□ 0.4
ABCA3-206ENST00000569062 SLC35D2Q76EJ3 337 aa17.52■□□□□ 0.4
ABCA3-206ENST00000569062 ARPINQ7Z6K5 226 aa17.52■□□□□ 0.4
ABCA3-206ENST00000569062 OR6N1Q8NGY5 312 aa17.52■□□□□ 0.4
ABCA3-206ENST00000569062 HTRA1Q92743 480 aa17.52■□□□□ 0.4
ABCA3-206ENST00000569062 KATNB1Q9BVA0 655 aa17.52■□□□□ 0.4
ABCA3-206ENST00000569062 POLR2J2Q9GZM3 115 aaKnown RBP17.52■□□□□ 0.4
ABCA3-206ENST00000569062 POLR2J3Q9H1A7 115 aaKnown RBP17.52■□□□□ 0.4
ABCA3-206ENST00000569062 CR1P17927 2039 aa17.52■□□□□ 0.39
ABCA3-206ENST00000569062 SSX4O60224 188 aa17.51■□□□□ 0.39
ABCA3-206ENST00000569062 CRYAAP02489 173 aa17.51■□□□□ 0.39
ABCA3-206ENST00000569062 MT-ND1P03886 318 aa17.51■□□□□ 0.39
ABCA3-206ENST00000569062 CBR1P16152 277 aa17.51■□□□□ 0.39
ABCA3-206ENST00000569062 CALCRP30988 508 aa17.51■□□□□ 0.39
ABCA3-206ENST00000569062 CAPZA2P47755 286 aa17.51■□□□□ 0.39
ABCA3-206ENST00000569062 SLC7A2P52569 658 aa17.51■□□□□ 0.39
ABCA3-206ENST00000569062 C3orf36Q3SXR2 165 aa17.51■□□□□ 0.39
ABCA3-206ENST00000569062 DNM1P46Q6ZS02 220 aa17.51■□□□□ 0.39
ABCA3-206ENST00000569062 MAPK1IP1LQ8NDC0 245 aa17.51■□□□□ 0.39
ABCA3-206ENST00000569062 TMEM239Q8WW34 195 aa17.51■□□□□ 0.39
ABCA3-206ENST00000569062 HOPXQ9BPY8 73 aaPredicted RBP17.51■□□□□ 0.39
ABCA3-206ENST00000569062 KCNS3Q9BQ31 491 aa17.51■□□□□ 0.39
ABCA3-206ENST00000569062 ULBP2Q9BZM5 246 aa17.51■□□□□ 0.39
ABCA3-206ENST00000569062 FAM107BQ9H098 131 aa17.51■□□□□ 0.39
ABCA3-206ENST00000569062 EFCAB1Q9HAE3 211 aa17.51■□□□□ 0.39
ABCA3-206ENST00000569062 B3GAT2Q9NPZ5 323 aa17.51■□□□□ 0.39
ABCA3-206ENST00000569062 C20orf141Q9NUB4 165 aa17.51■□□□□ 0.39
ABCA3-206ENST00000569062 AP3M1Q9Y2T2 418 aa17.51■□□□□ 0.39
ABCA3-206ENST00000569062 NSD1Q96L73 2696 aaPredicted RBP17.5■□□□□ 0.39
ABCA3-206ENST00000569062 RNF223E7ERA6 249 aa17.5■□□□□ 0.39
ABCA3-206ENST00000569062 BLOC1S5-TXNDC5H3BN57 136 aa17.5■□□□□ 0.39
ABCA3-206ENST00000569062 HIST1H2ABP04908 130 aa17.5■□□□□ 0.39
ABCA3-206ENST00000569062 FUT1P19526 365 aa17.5■□□□□ 0.39
ABCA3-206ENST00000569062 FUT4P22083 530 aa17.5■□□□□ 0.39
ABCA3-206ENST00000569062 RBM34P42696 430 aaKnown RBP17.5■□□□□ 0.39
ABCA3-206ENST00000569062 CSNK1A1P48729 337 aa17.5■□□□□ 0.39
ABCA3-206ENST00000569062 NUDT2P50583 147 aa17.5■□□□□ 0.39
ABCA3-206ENST00000569062 IDH3GP51553 393 aaPredicted RBP17.5■□□□□ 0.39
ABCA3-206ENST00000569062 HIST3H2AQ7L7L0 130 aa17.5■□□□□ 0.39
ABCA3-206ENST00000569062 NANOGNBQ7Z5D8 188 aa17.5■□□□□ 0.39
ABCA3-206ENST00000569062 VTCN1Q7Z7D3 282 aa17.5■□□□□ 0.39
ABCA3-206ENST00000569062 MDP1Q86V88 176 aa17.5■□□□□ 0.39
ABCA3-206ENST00000569062 FAM169BQ8N8A8 192 aa17.5■□□□□ 0.39
ABCA3-206ENST00000569062 OR6X1Q8NH79 312 aa17.5■□□□□ 0.39
ABCA3-206ENST00000569062 HIST1H2ACQ93077 130 aa17.5■□□□□ 0.39
ABCA3-206ENST00000569062 TMEM54Q969K7 222 aa17.5■□□□□ 0.39
ABCA3-206ENST00000569062 ADAD1Q96M93 576 aaKnown RBP17.5■□□□□ 0.39
ABCA3-206ENST00000569062 MYLK2Q9H1R3 596 aa17.5■□□□□ 0.39
ABCA3-206ENST00000569062 BARX1Q9HBU1 254 aaPredicted RBP17.5■□□□□ 0.39
ABCA3-206ENST00000569062 A4GNTQ9UNA3 340 aa17.5■□□□□ 0.39
ABCA3-206ENST00000569062 POFUT2Q9Y2G5 429 aa17.5■□□□□ 0.39
ABCA3-206ENST00000569062 ARFGEF3Q5TH69 2177 aa17.49■□□□□ 0.39
ABCA3-206ENST00000569062 CXCR6O00574 342 aa17.49■□□□□ 0.39
ABCA3-206ENST00000569062 OR7A10O76100 309 aa17.49■□□□□ 0.39
ABCA3-206ENST00000569062 HLA-HP01893 362 aa17.49■□□□□ 0.39
ABCA3-206ENST00000569062 B4GALT1P15291 398 aa17.49■□□□□ 0.39
ABCA3-206ENST00000569062 NPRL3Q12980 569 aa17.49■□□□□ 0.39
ABCA3-206ENST00000569062 MST1LQ2TV78 715 aa17.49■□□□□ 0.39
ABCA3-206ENST00000569062 ZNF813Q6ZN06 617 aa17.49■□□□□ 0.39
ABCA3-206ENST00000569062 ZNF627Q7L945 461 aa17.49■□□□□ 0.39
ABCA3-206ENST00000569062 FBXO17Q96EF6 278 aa17.49■□□□□ 0.39
ABCA3-206ENST00000569062 SGTBQ96EQ0 304 aa17.49■□□□□ 0.39
ABCA3-206ENST00000569062 FOXB1Q99853 325 aa17.49■□□□□ 0.39
ABCA3-206ENST00000569062 NOX3Q9HBY0 568 aa17.49■□□□□ 0.39
ABCA3-206ENST00000569062 MOV10Q9HCE1 1003 aaKnown RBP17.49■□□□□ 0.39
ABCA3-206ENST00000569062 CA10Q9NS85 328 aa17.49■□□□□ 0.39
ABCA3-206ENST00000569062 B3GNT2Q9NY97 397 aa17.49■□□□□ 0.39
ABCA3-206ENST00000569062 SNX13Q9Y5W8 968 aa17.49■□□□□ 0.39
ABCA3-206ENST00000569062 H7C417 338 aa17.48■□□□□ 0.39
ABCA3-206ENST00000569062 PIP5K1CO60331 668 aa17.48■□□□□ 0.39
ABCA3-206ENST00000569062 F13BP05160 661 aa17.48■□□□□ 0.39
ABCA3-206ENST00000569062 THRBP10828 461 aa17.48■□□□□ 0.39
ABCA3-206ENST00000569062 CD79AP11912 226 aa17.48■□□□□ 0.39
ABCA3-206ENST00000569062 DRD4P21917 467 aa17.48■□□□□ 0.39
ABCA3-206ENST00000569062 ARR3P36575 388 aa17.48■□□□□ 0.39
ABCA3-206ENST00000569062 YAP1P46937 504 aaKnown RBP17.48■□□□□ 0.39
ABCA3-206ENST00000569062 GSK3BP49841 420 aa17.48■□□□□ 0.39
ABCA3-206ENST00000569062 NUDT6P53370 316 aa17.48■□□□□ 0.39
ABCA3-206ENST00000569062 LSM11P83369 360 aaKnown RBP eCLIP17.48■□□□□ 0.39
ABCA3-206ENST00000569062 RPL18Q07020 188 aaKnown RBP17.48■□□□□ 0.39
ABCA3-206ENST00000569062 PIGFQ07326 219 aa17.48■□□□□ 0.39
ABCA3-206ENST00000569062 RAB35Q15286 201 aa17.48■□□□□ 0.39
ABCA3-206ENST00000569062 SWI5Q1ZZU3 235 aa17.48■□□□□ 0.39
ABCA3-206ENST00000569062 VHLLQ6RSH7 139 aa17.48■□□□□ 0.39
ABCA3-206ENST00000569062 HACD2Q6Y1H2 254 aa17.48■□□□□ 0.39
ABCA3-206ENST00000569062 CCDC36Q8IYA8 594 aa17.48■□□□□ 0.39
ABCA3-206ENST00000569062 LZICQ8WZA0 190 aa17.48■□□□□ 0.39
ABCA3-206ENST00000569062 ZNF566Q969W8 418 aa17.48■□□□□ 0.39
ABCA3-206ENST00000569062 SLC25A44Q96H78 314 aaPredicted RBP17.48■□□□□ 0.39
ABCA3-206ENST00000569062 PRRC1Q96M27 445 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms