RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 ASB10Q8WXI3 467 aa13.92□□□□□ -0.18
SPG7-218ENST00000568205 ADAD1Q96M93 576 aaKnown RBP13.92□□□□□ -0.18
SPG7-218ENST00000568205 TSPAN32Q96QS1 320 aa13.92□□□□□ -0.18
SPG7-218ENST00000568205 OR2M2Q96R28 347 aa13.92□□□□□ -0.18
SPG7-218ENST00000568205 SLC29A1Q99808 456 aa13.92□□□□□ -0.18
SPG7-218ENST00000568205 EMC6Q9BV81 110 aa13.92□□□□□ -0.18
SPG7-218ENST00000568205 TSSK6Q9BXA6 273 aa13.92□□□□□ -0.18
SPG7-218ENST00000568205 PIGMQ9H3S5 423 aa13.92□□□□□ -0.18
SPG7-218ENST00000568205 ADAM18Q9Y3Q7 739 aa13.92□□□□□ -0.18
SPG7-218ENST00000568205 USP9XQ93008 2570 aaPredicted RBP13.91□□□□□ -0.18
SPG7-218ENST00000568205 SLC35F4A4IF30 521 aa13.91□□□□□ -0.18
SPG7-218ENST00000568205 SLC43A1O75387 559 aa13.91□□□□□ -0.18
SPG7-218ENST00000568205 SMNDC1O75940 238 aaKnown RBP eCLIP13.91□□□□□ -0.18
SPG7-218ENST00000568205 ATP6V1G2O95670 118 aa13.91□□□□□ -0.18
SPG7-218ENST00000568205 APEHP13798 732 aaKnown RBP13.91□□□□□ -0.18
SPG7-218ENST00000568205 POU1F1P28069 291 aa13.91□□□□□ -0.18
SPG7-218ENST00000568205 RPS6KA3P51812 740 aa13.91□□□□□ -0.18
SPG7-218ENST00000568205 SLC25A35Q3KQZ1 300 aa13.91□□□□□ -0.18
SPG7-218ENST00000568205 FAM205BPQ63HN1 556 aa13.91□□□□□ -0.18
SPG7-218ENST00000568205 LPCAT4Q643R3 524 aa13.91□□□□□ -0.18
SPG7-218ENST00000568205 GPR139Q6DWJ6 353 aa13.91□□□□□ -0.18
SPG7-218ENST00000568205 FAM122BQ7Z309 247 aa13.91□□□□□ -0.18
SPG7-218ENST00000568205 MRGPRGQ86SM5 289 aa13.91□□□□□ -0.18
SPG7-218ENST00000568205 WDFY1Q8IWB7 410 aa13.91□□□□□ -0.18
SPG7-218ENST00000568205 RELL2Q8NC24 303 aaPredicted RBP13.91□□□□□ -0.18
SPG7-218ENST00000568205 MAGEE2Q8TD90 523 aaPredicted RBP13.91□□□□□ -0.18
SPG7-218ENST00000568205 ITLN2Q8WWU7 325 aaPredicted RBP13.91□□□□□ -0.18
SPG7-218ENST00000568205 Q96M85 177 aa13.91□□□□□ -0.18
SPG7-218ENST00000568205 OPN3Q9H1Y3 402 aaPredicted RBP13.91□□□□□ -0.18
SPG7-218ENST00000568205 PLSCR4Q9NRQ2 329 aa13.91□□□□□ -0.18
SPG7-218ENST00000568205 ENOPH1Q9UHY7 261 aa13.91□□□□□ -0.18
SPG7-218ENST00000568205 ZNF346Q9UL40 294 aaKnown RBP13.91□□□□□ -0.18
SPG7-218ENST00000568205 IER3IP1Q9Y5U9 82 aa13.91□□□□□ -0.18
SPG7-218ENST00000568205 DOCK7Q96N67 2140 aa13.91□□□□□ -0.18
SPG7-218ENST00000568205 MYO7BQ6PIF6 2116 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 HELZ2Q9BYK8 2649 aaKnown RBP13.9□□□□□ -0.18
SPG7-218ENST00000568205 TEX13CA0A0J9YWL9 993 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 A6NIZ1 184 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 OR6C65A6NJZ3 312 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 EEF1E1-BLOC1S5C9J1V9 151 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 BHLHE40O14503 412 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 MSTNO14793 375 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 ARPC3O15145 178 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 EEF1E1O43324 174 aaKnown RBP13.9□□□□□ -0.18
SPG7-218ENST00000568205 AGFG2O95081 481 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 TXNDC12O95881 172 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 AGAP20933 346 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 SDHAP31040 664 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 ACVR1BP36896 505 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 RAP1BP61224 184 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 ESRRGP62508 458 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 RAP1AP62834 184 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 CAMK2DQ13557 499 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 LRRC36Q1X8D7 754 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 OGFRL1Q5TC84 451 aaPredicted RBP13.9□□□□□ -0.18
SPG7-218ENST00000568205 CARD17Q5XLA6 110 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 ZNF808Q8N4W9 903 aaPredicted RBP13.9□□□□□ -0.18
SPG7-218ENST00000568205 ARIH2OSQ8N7S6 290 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 OR2T33Q8NG76 320 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 OR4Q3Q8NH05 313 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 LILRB4Q8NHJ6 448 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 ZNF519Q8TB69 540 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 SLC25A44Q96H78 314 aaPredicted RBP13.9□□□□□ -0.18
SPG7-218ENST00000568205 ZNF570Q96NI8 536 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 ERMAPQ96PL5 475 aaPredicted RBP13.9□□□□□ -0.18
SPG7-218ENST00000568205 SLCO5A1Q9H2Y9 848 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 C8orf4Q9NR00 106 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 GRHPRQ9UBQ7 328 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 PRSS50Q9UI38 385 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 BAIAP2Q9UQB8 552 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 ORC6Q9Y5N6 252 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 LRRK2Q5S007 2527 aa13.9□□□□□ -0.18
SPG7-218ENST00000568205 PHF3Q92576 2039 aaKnown RBP13.9□□□□□ -0.18
SPG7-218ENST00000568205 DOPEY1Q5JWR5 2465 aa13.89□□□□□ -0.19
SPG7-218ENST00000568205 FAM90A27PA6NNH2 459 aa13.89□□□□□ -0.19
SPG7-218ENST00000568205 IMPA2O14732 288 aa13.89□□□□□ -0.19
SPG7-218ENST00000568205 IDH3BO43837 385 aa13.89□□□□□ -0.19
SPG7-218ENST00000568205 IGHV3-9P01782 118 aa13.89□□□□□ -0.19
SPG7-218ENST00000568205 IGHG1P01857 330 aa13.89□□□□□ -0.19
SPG7-218ENST00000568205 ACADSP16219 412 aa13.89□□□□□ -0.19
SPG7-218ENST00000568205 CSNK1A1P48729 337 aa13.89□□□□□ -0.19
SPG7-218ENST00000568205 CRISP1P54107 249 aa13.89□□□□□ -0.19
SPG7-218ENST00000568205 RAD23AP54725 363 aa13.89□□□□□ -0.19
SPG7-218ENST00000568205 RUNX1T1Q06455 604 aa13.89□□□□□ -0.19
SPG7-218ENST00000568205 KRR1Q13601 381 aaKnown RBP13.89□□□□□ -0.19
SPG7-218ENST00000568205 GINS1Q14691 196 aa13.89□□□□□ -0.19
SPG7-218ENST00000568205 PGGHGQ32M88 737 aa13.89□□□□□ -0.19
SPG7-218ENST00000568205 TSPO2Q5TGU0 170 aa13.89□□□□□ -0.19
SPG7-218ENST00000568205 XKRXQ6PP77 449 aa13.89□□□□□ -0.19
SPG7-218ENST00000568205 MED12LQ86YW9 2145 aa13.89□□□□□ -0.19
SPG7-218ENST00000568205 C20orf196Q8IYI0 205 aa13.89□□□□□ -0.19
SPG7-218ENST00000568205 LNX2Q8N448 690 aa13.89□□□□□ -0.19
SPG7-218ENST00000568205 IQCF1Q8N6M8 205 aa13.89□□□□□ -0.19
SPG7-218ENST00000568205 PACRGLQ8N7B6 248 aa13.89□□□□□ -0.19
SPG7-218ENST00000568205 ZNF610Q8N9Z0 462 aa13.89□□□□□ -0.19
SPG7-218ENST00000568205 POMGNT2Q8NAT1 580 aa13.89□□□□□ -0.19
SPG7-218ENST00000568205 CA5BP1Q8WTZ4 195 aa13.89□□□□□ -0.19
SPG7-218ENST00000568205 ZNF566Q969W8 418 aa13.89□□□□□ -0.19
SPG7-218ENST00000568205 RASD2Q96D21 266 aa13.89□□□□□ -0.19
SPG7-218ENST00000568205 GABARAPL3Q9BY60 117 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms