RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 FCGR1BQ92637 280 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 MYDGFQ969H8 173 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 UPRTQ96BW1 309 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 RMND5BQ96G75 393 aaPredicted RBP2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 CEP170P1Q96L14 293 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 DHRS9Q9BPW9 319 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 KCNS3Q9BQ31 491 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 POLR1EQ9GZS1 481 aaKnown RBP2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 ACTR8Q9H981 624 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 CAB39LQ9H9S4 337 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 LIN28AQ9H9Z2 209 aaKnown RBP2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 MRM3Q9HC36 420 aaKnown RBP2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 EXD2Q9NVH0 621 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 C1orf123Q9NWV4 160 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 TAS2R3Q9NYW6 316 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 STMN3Q9NZ72 180 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 IL37Q9NZH6 218 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 STX18Q9P2W9 335 aaKnown RBP2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 ONECUT1Q9UBC0 465 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 PACSIN2Q9UNF0 486 aaPredicted RBP2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 V9GYQ6 96 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 ECM29Q5VYK3 1845 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 BDP1A6H8Y1 2624 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 ATP8B3O60423 1300 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 RIC1Q4ADV7 1423 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 LOC100506127A0A0U1RQW1 187 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 ESYT2A0FGR8 921 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 NCF1BA6NI72 391 aaPredicted RBP2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 ARGFXA6NJG6 315 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 NCF1CA8MVU1 366 aaPredicted RBP2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 TCP11X1B4DZS4 312 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 H0Y9J4 135 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 LANCL1O43813 399 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 GMFGO60234 142 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 ZNF861PO60384 105 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 GPX5O75715 221 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 CIB2O75838 187 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 MYO1DO94832 1006 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 SNAPINO95295 136 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 SEMG1P04279 462 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 IFNA16P05015 189 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 UBTFL1P0CB47 393 aaPredicted RBP2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 HOXA6P31267 233 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 UGT1A3P35503 534 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 NUDT1P36639 197 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 HTR2BP41595 481 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 CEBPGP53567 150 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 ACTR1AP61163 376 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 MRPS11P82912 194 aaKnown RBP2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 VLDLRP98155 873 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 RAD51Q06609 339 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 OVGP1Q12889 678 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 DDX39BQ13838 428 aaKnown RBP2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 IL17AQ16552 155 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 AANATQ16613 207 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 MAJINQ3KP22 176 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 DCST2Q5T1A1 773 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 C3orf33Q6P1S2 294 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 ISLR2Q6UXK2 745 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 TFAP2EQ6VUC0 442 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 IDO2Q6ZQW0 420 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 IFNEQ86WN2 208 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 TRIM69Q86WT6 500 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 CLEC4FQ8N1N0 589 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 UBE2J2Q8N2K1 259 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 CADM2Q8N3J6 435 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 TBC1D19Q8N5T2 526 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 UBL4BQ8N7F7 174 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 CNNM3Q8NE01 707 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 BBS1Q8NFJ9 593 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 OR2T33Q8NG76 320 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 OR10Z1Q8NGY1 313 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 FANK1Q8TC84 345 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 ELMO2Q96JJ3 720 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 TRNT1Q96Q11 434 aaKnown RBP2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 IL4I1Q96RQ9 567 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 ZNF184Q99676 751 aaPredicted RBP2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 GPR61Q9BZJ8 451 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 HDHD2Q9H0R4 259 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 RAB17Q9H0T7 212 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 GBA3Q9H227 469 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 OR51V1Q9H2C8 321 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 LPAR2Q9HBW0 351 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 AGPAT5Q9NUQ2 364 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 RIMS3Q9UJD0 308 aa2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 SAMD4AQ9UPU9 718 aaKnown RBP2.59□□□□□ -1.99
HERPUD1-212ENST00000567944 TTC41PQ6P2S7 1318 aa2.59□□□□□ -2
HERPUD1-212ENST00000567944 CDHR2Q9BYE9 1310 aa2.59□□□□□ -2
HERPUD1-212ENST00000567944 ZDBF2Q9HCK1 2354 aa2.59□□□□□ -2
HERPUD1-212ENST00000567944 TDRD6O60522 2096 aaKnown RBP2.59□□□□□ -2
HERPUD1-212ENST00000567944 ZNF609O15014 1411 aa2.59□□□□□ -2
HERPUD1-212ENST00000567944 SSC5DA1L4H1 1573 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 CACNA1AO00555 2505 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 FAM230AA0A1W2PPH8 454 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 A8MXQ7 604 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 WRBO00258 174 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 SDHDO14521 159 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 SLC22A1O15245 554 aa2.58□□□□□ -2
HERPUD1-212ENST00000567944 NOS1APO75052 506 aaPredicted RBP2.58□□□□□ -2
HERPUD1-212ENST00000567944 UFL1O94874 794 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms