RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 HLA-DQB1P01920 261 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 TBC1D3HP0C7X1 549 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 PRKAR1AP10644 381 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 ALPPL2P10696 532 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 IL7P13232 177 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 CPMP14384 443 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 ZNF3P17036 446 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 RPS4Y1P22090 263 aaKnown RBP4.8□□□□□ -1.64
CAPN3-217ENST00000567817 HNRNPA2B1P22626 353 aaKnown RBP4.8□□□□□ -1.64
CAPN3-217ENST00000567817 AKT2P31751 481 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 TALDO1P37837 337 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 FEN1P39748 380 aaKnown RBP4.8□□□□□ -1.64
CAPN3-217ENST00000567817 SOX3P41225 446 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 CASP3P42574 277 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 SLC1A3P43003 542 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 HTR3AP46098 478 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 PGDP52209 483 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 GAS1P54826 345 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 CTBP2P56545 445 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 BTN3A2P78410 334 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 SSBP2P81877 361 aaPredicted RBP4.8□□□□□ -1.64
CAPN3-217ENST00000567817 PSG6Q00889 435 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 ILF3Q12906 894 aaKnown RBP eCLIP4.8□□□□□ -1.64
CAPN3-217ENST00000567817 HNRNPA0Q13151 305 aaKnown RBP4.8□□□□□ -1.64
CAPN3-217ENST00000567817 KIR2DS5Q14953 304 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 QPRTQ15274 297 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 ZNHIT3Q15649 155 aaPredicted RBP4.8□□□□□ -1.64
CAPN3-217ENST00000567817 C4orf46Q504U0 113 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 CCDC92Q53HC0 331 aaPredicted RBP4.8□□□□□ -1.64
CAPN3-217ENST00000567817 ZNF628Q5EBL2 1059 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 LCN1P1Q5VSP4 162 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 LIPKQ5VXJ0 399 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 TRIQKQ629K1 86 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 TIGD3Q6B0B8 471 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 TYW3Q6IPR3 259 aaKnown RBP4.8□□□□□ -1.64
CAPN3-217ENST00000567817 TBC1D3CQ6IPX1 549 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 ACSM5Q6NUN0 579 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 FAM131AQ6UXB0 335 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 ZNF517Q6ZMY9 492 aaPredicted RBP4.8□□□□□ -1.64
CAPN3-217ENST00000567817 FRRS1Q6ZNA5 592 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 TMPRSS11FQ6ZWK6 438 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 GDPD3Q7L5L3 318 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 VN1R4Q7Z5H5 301 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 TPRA1Q86W33 373 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 OOSP2Q86WS3 158 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 RBM45Q8IUH3 476 aaKnown RBP4.8□□□□□ -1.64
CAPN3-217ENST00000567817 GRAMD2AQ8IUY3 354 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 NRMQ8IXM6 262 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 UBQLNLQ8IYU4 475 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 TBC1D3Q8IZP1 549 aaPredicted RBP4.8□□□□□ -1.64
CAPN3-217ENST00000567817 MS4A15Q8N5U1 240 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 ACBD7Q8N6N7 88 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 C19orf18Q8NEA5 215 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 ENKURQ8TC29 256 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 DNAJA4Q8WW22 397 aaPredicted RBP4.8□□□□□ -1.64
CAPN3-217ENST00000567817 PHYHIPQ92561 330 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 CTHRC1Q96CG8 243 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 SIPA1Q96FS4 1042 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 DIRAS2Q96HU8 199 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 C10orf90Q96M02 699 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 CMTM3Q96MX0 182 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 FYTTD1Q96QD9 318 aaKnown RBP4.8□□□□□ -1.64
CAPN3-217ENST00000567817 OR2A5Q96R48 311 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 ZNF559Q9BR84 538 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 TTYH2Q9BSA4 534 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 GSDMCQ9BYG8 508 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 NDEL1Q9GZM8 345 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 IL21RQ9HBE5 538 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 TMEM27Q9HBJ8 222 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 FGF22Q9HCT0 170 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 SNTG1Q9NSN8 517 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 WSB2Q9NYS7 404 aaPredicted RBP4.8□□□□□ -1.64
CAPN3-217ENST00000567817 CLEC2DQ9UHP7 191 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 MOSPD1Q9UJG1 213 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 MED31Q9Y3C7 131 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 SLC22A7Q9Y694 548 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 FBN2P35556 2912 aa4.8□□□□□ -1.64
CAPN3-217ENST00000567817 ANKRD12Q6UB98 2062 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 ITPR3Q14573 2671 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 A0A1B0GTQ1 180 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 A0A1W2PQL4 384 aaPredicted RBP4.79□□□□□ -1.64
CAPN3-217ENST00000567817 A6NCN8 305 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 SYNDIG1LA6NDD5 238 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 HMX3A6NHT5 357 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 CPSF4LA6NMK7 179 aaKnown RBP4.79□□□□□ -1.64
CAPN3-217ENST00000567817 RIIAD1A6NNX1 92 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 CENPXA8MT69 81 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 CENPBD1B2RD01 187 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 SGK494L7N484 410 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 M0R129 80 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 CTDSP2O14595 271 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 POLR1CO15160 346 aaPredicted RBP4.79□□□□□ -1.64
CAPN3-217ENST00000567817 PGRMC2O15173 223 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 KLK10O43240 276 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 ORC5O43913 435 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 TMCC2O75069 709 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 KCNK2O95069 426 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 GPR75O95800 540 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 EPPINO95925 133 aa4.79□□□□□ -1.64
CAPN3-217ENST00000567817 IGF2P01344 180 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms