RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 CPPED1Q9BRF8 314 aaPredicted RBP13.18□□□□□ -0.3
CDR2-206ENST00000567406 C19orf24Q9BVV8 132 aa13.18□□□□□ -0.3
CDR2-206ENST00000567406 MRPL37Q9BZE1 423 aaKnown RBP13.18□□□□□ -0.3
CDR2-206ENST00000567406 MYOZ1Q9NP98 299 aaPredicted RBP13.18□□□□□ -0.3
CDR2-206ENST00000567406 ARGLU1Q9NWB6 273 aaPredicted RBP13.18□□□□□ -0.3
CDR2-206ENST00000567406 ZNF224Q9NZL3 707 aa13.18□□□□□ -0.3
CDR2-206ENST00000567406 TESQ9UGI8 421 aaKnown RBP13.18□□□□□ -0.3
CDR2-206ENST00000567406 SLC13A4Q9UKG4 626 aa13.18□□□□□ -0.3
CDR2-206ENST00000567406 USP22Q9UPT9 525 aa13.18□□□□□ -0.3
CDR2-206ENST00000567406 POFUT2Q9Y2G5 429 aa13.18□□□□□ -0.3
CDR2-206ENST00000567406 CPSF4LA6NMK7 179 aaKnown RBP13.17□□□□□ -0.3
CDR2-206ENST00000567406 ZNF726A6NNF4 738 aa13.17□□□□□ -0.3
CDR2-206ENST00000567406 AKAP8O43823 692 aaKnown RBP13.17□□□□□ -0.3
CDR2-206ENST00000567406 MFN2O95140 757 aa13.17□□□□□ -0.3
CDR2-206ENST00000567406 TGDSO95455 350 aa13.17□□□□□ -0.3
CDR2-206ENST00000567406 GPX2P18283 190 aa13.17□□□□□ -0.3
CDR2-206ENST00000567406 NR4A1P22736 598 aa13.17□□□□□ -0.3
CDR2-206ENST00000567406 APEX1P27695 318 aaKnown RBP13.17□□□□□ -0.3
CDR2-206ENST00000567406 ALDH3B1P43353 468 aa13.17□□□□□ -0.3
CDR2-206ENST00000567406 SEC24CP53992 1094 aa13.17□□□□□ -0.3
CDR2-206ENST00000567406 BIDP55957 195 aa13.17□□□□□ -0.3
CDR2-206ENST00000567406 PUDPQ08623 228 aa13.17□□□□□ -0.3
CDR2-206ENST00000567406 CCNIQ14094 377 aa13.17□□□□□ -0.3
CDR2-206ENST00000567406 MAD2L1BPQ15013 274 aaPredicted RBP13.17□□□□□ -0.3
CDR2-206ENST00000567406 NPTX1Q15818 432 aa13.17□□□□□ -0.3
CDR2-206ENST00000567406 DUSP7Q16829 419 aa13.17□□□□□ -0.3
CDR2-206ENST00000567406 GSG1Q2KHT4 349 aa13.17□□□□□ -0.3
CDR2-206ENST00000567406 C5orf46Q6UWT4 87 aa13.17□□□□□ -0.3
CDR2-206ENST00000567406 WDR88Q6ZMY6 472 aa13.17□□□□□ -0.3
CDR2-206ENST00000567406 CARM1Q86X55 608 aa13.17□□□□□ -0.3
CDR2-206ENST00000567406 PTOV1Q86YD1 416 aa13.17□□□□□ -0.3
CDR2-206ENST00000567406 ADPRHL1Q8NDY3 354 aa13.17□□□□□ -0.3
CDR2-206ENST00000567406 HIPK4Q8NE63 616 aa13.17□□□□□ -0.3
CDR2-206ENST00000567406 GPR32P1Q8NGA4 272 aa13.17□□□□□ -0.3
CDR2-206ENST00000567406 OR4D11Q8NGI4 311 aa13.17□□□□□ -0.3
CDR2-206ENST00000567406 UBASH3BQ8TF42 649 aa13.17□□□□□ -0.3
CDR2-206ENST00000567406 NEU4Q8WWR8 484 aaPredicted RBP13.17□□□□□ -0.3
CDR2-206ENST00000567406 EPYCQ99645 322 aa13.17□□□□□ -0.3
CDR2-206ENST00000567406 MCHR1Q99705 422 aa13.17□□□□□ -0.3
CDR2-206ENST00000567406 CCDC28BQ9BUN5 200 aa13.17□□□□□ -0.3
CDR2-206ENST00000567406 ULBP2Q9BZM5 246 aa13.17□□□□□ -0.3
CDR2-206ENST00000567406 TMEM38AQ9H6F2 299 aa13.17□□□□□ -0.3
CDR2-206ENST00000567406 MYEF2Q9P2K5 600 aaKnown RBP13.17□□□□□ -0.3
CDR2-206ENST00000567406 CMAHPQ9Y471 501 aa13.17□□□□□ -0.3
CDR2-206ENST00000567406 CORINQ9Y5Q5 1042 aa13.17□□□□□ -0.3
CDR2-206ENST00000567406 PRORSD1PA6NEY8 169 aa13.16□□□□□ -0.3
CDR2-206ENST00000567406 VSTM5A8MXK1 200 aa13.16□□□□□ -0.3
CDR2-206ENST00000567406 EVPLLA8MZ36 301 aa13.16□□□□□ -0.3
CDR2-206ENST00000567406 THY1P04216 161 aa13.16□□□□□ -0.3
CDR2-206ENST00000567406 ADORA3P0DMS8 318 aa13.16□□□□□ -0.3
CDR2-206ENST00000567406 ZNF35P13682 527 aa13.16□□□□□ -0.3
CDR2-206ENST00000567406 IFNGR1P15260 489 aa13.16□□□□□ -0.3
CDR2-206ENST00000567406 ZNF14P17017 642 aaPredicted RBP13.16□□□□□ -0.3
CDR2-206ENST00000567406 PPIBP23284 216 aaKnown RBP13.16□□□□□ -0.3
CDR2-206ENST00000567406 GIFP27352 417 aa13.16□□□□□ -0.3
CDR2-206ENST00000567406 GIPRP48546 466 aa13.16□□□□□ -0.3
CDR2-206ENST00000567406 MTPNP58546 118 aa13.16□□□□□ -0.3
CDR2-206ENST00000567406 RAB39AQ14964 217 aa13.16□□□□□ -0.3
CDR2-206ENST00000567406 ALKBH6Q3KRA9 238 aa13.16□□□□□ -0.3
CDR2-206ENST00000567406 RUNDC3AQ59EK9 446 aa13.16□□□□□ -0.3
CDR2-206ENST00000567406 AGBL2Q5U5Z8 902 aa13.16□□□□□ -0.3
CDR2-206ENST00000567406 TSPYL5Q86VY4 417 aaPredicted RBP13.16□□□□□ -0.3
CDR2-206ENST00000567406 ZNF786Q8N393 782 aa13.16□□□□□ -0.3
CDR2-206ENST00000567406 LRRC17Q8N6Y2 441 aa13.16□□□□□ -0.3
CDR2-206ENST00000567406 SCAIQ8N9R8 606 aa13.16□□□□□ -0.3
CDR2-206ENST00000567406 ZNF540Q8NDQ6 660 aa13.16□□□□□ -0.3
CDR2-206ENST00000567406 OR6T1Q8NGN1 323 aa13.16□□□□□ -0.3
CDR2-206ENST00000567406 VANGL1Q8TAA9 524 aaPredicted RBP13.16□□□□□ -0.3
CDR2-206ENST00000567406 C1orf159Q96HA4 380 aa13.16□□□□□ -0.3
CDR2-206ENST00000567406 LRR1Q96L50 414 aa13.16□□□□□ -0.3
CDR2-206ENST00000567406 FOXB1Q99853 325 aa13.16□□□□□ -0.3
CDR2-206ENST00000567406 NARFLQ9H6Q4 476 aa13.16□□□□□ -0.3
CDR2-206ENST00000567406 MOV10Q9HCE1 1003 aaKnown RBP13.16□□□□□ -0.3
CDR2-206ENST00000567406 MRPL39Q9NYK5 338 aaKnown RBP13.16□□□□□ -0.3
CDR2-206ENST00000567406 NOX1Q9Y5S8 564 aa13.16□□□□□ -0.3
CDR2-206ENST00000567406 M0QX08 132 aa13.15□□□□□ -0.3
CDR2-206ENST00000567406 KPNA4O00629 521 aaPredicted RBP13.15□□□□□ -0.3
CDR2-206ENST00000567406 SERPINB7O75635 380 aa13.15□□□□□ -0.3
CDR2-206ENST00000567406 CH25HO95992 272 aa13.15□□□□□ -0.3
CDR2-206ENST00000567406 ERCC1P07992 297 aaPredicted RBP13.15□□□□□ -0.3
CDR2-206ENST00000567406 TACSTD2P09758 323 aa13.15□□□□□ -0.3
CDR2-206ENST00000567406 COL8A2P25067 703 aa13.15□□□□□ -0.3
CDR2-206ENST00000567406 CHN2P52757 468 aa13.15□□□□□ -0.3
CDR2-206ENST00000567406 RAB1AP62820 205 aa13.15□□□□□ -0.3
CDR2-206ENST00000567406 RIN1Q13671 783 aa13.15□□□□□ -0.3
CDR2-206ENST00000567406 SQLEQ14534 574 aa13.15□□□□□ -0.3
CDR2-206ENST00000567406 MELKQ14680 651 aa13.15□□□□□ -0.3
CDR2-206ENST00000567406 TTMPQ5BVD1 217 aa13.15□□□□□ -0.3
CDR2-206ENST00000567406 ENTPD8Q5MY95 495 aa13.15□□□□□ -0.3
CDR2-206ENST00000567406 GKAP1Q5VSY0 366 aaPredicted RBP13.15□□□□□ -0.3
CDR2-206ENST00000567406 RETREG3Q86VR2 466 aa13.15□□□□□ -0.3
CDR2-206ENST00000567406 RANBP3LQ86VV4 465 aaPredicted RBP13.15□□□□□ -0.3
CDR2-206ENST00000567406 SKA3Q8IX90 412 aa13.15□□□□□ -0.3
CDR2-206ENST00000567406 CCDC36Q8IYA8 594 aa13.15□□□□□ -0.3
CDR2-206ENST00000567406 IL17RDQ8NFM7 739 aa13.15□□□□□ -0.3
CDR2-206ENST00000567406 OR5J2Q8NH18 312 aa13.15□□□□□ -0.3
CDR2-206ENST00000567406 OR6S1Q8NH40 331 aa13.15□□□□□ -0.3
CDR2-206ENST00000567406 MRPL24Q96A35 216 aaKnown RBP13.15□□□□□ -0.3
CDR2-206ENST00000567406 ARHGDIGQ99819 225 aa13.15□□□□□ -0.3
CDR2-206ENST00000567406 TMEM43Q9BTV4 400 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms