RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 FBXO17Q96EF6 278 aa12.72□□□□□ -0.37
FANCA-220ENST00000566409 MPP4Q96JB8 637 aa12.72□□□□□ -0.37
FANCA-220ENST00000566409 ZNF75AQ96N20 296 aa12.72□□□□□ -0.37
FANCA-220ENST00000566409 NOX3Q9HBY0 568 aa12.72□□□□□ -0.37
FANCA-220ENST00000566409 CA10Q9NS85 328 aa12.72□□□□□ -0.37
FANCA-220ENST00000566409 MRGBPQ9NV56 204 aa12.72□□□□□ -0.37
FANCA-220ENST00000566409 ZNF224Q9NZL3 707 aa12.72□□□□□ -0.37
FANCA-220ENST00000566409 MXRA5Q9NR99 2828 aa12.72□□□□□ -0.37
FANCA-220ENST00000566409 AKAP8O43823 692 aaKnown RBP12.71□□□□□ -0.37
FANCA-220ENST00000566409 GPRIN2O60269 458 aa12.71□□□□□ -0.37
FANCA-220ENST00000566409 CRYAAP02489 173 aa12.71□□□□□ -0.37
FANCA-220ENST00000566409 ASAH2BP0C7U1 165 aa12.71□□□□□ -0.37
FANCA-220ENST00000566409 PAX7P23759 505 aa12.71□□□□□ -0.37
FANCA-220ENST00000566409 OR1E2P47887 323 aa12.71□□□□□ -0.37
FANCA-220ENST00000566409 IDH3GP51553 393 aaPredicted RBP12.71□□□□□ -0.37
FANCA-220ENST00000566409 NUDT6P53370 316 aa12.71□□□□□ -0.37
FANCA-220ENST00000566409 BIDP55957 195 aa12.71□□□□□ -0.37
FANCA-220ENST00000566409 ZP4Q12836 540 aa12.71□□□□□ -0.37
FANCA-220ENST00000566409 MAPRE2Q15555 327 aa12.71□□□□□ -0.37
FANCA-220ENST00000566409 ADIPOQQ15848 244 aa12.71□□□□□ -0.37
FANCA-220ENST00000566409 PRIMA1Q86XR5 153 aa12.71□□□□□ -0.37
FANCA-220ENST00000566409 ZNF525Q8N782 197 aa12.71□□□□□ -0.37
FANCA-220ENST00000566409 RASSF5Q8WWW0 418 aa12.71□□□□□ -0.37
FANCA-220ENST00000566409 NANOS1Q8WY41 292 aaKnown RBP12.71□□□□□ -0.37
FANCA-220ENST00000566409 RCN3Q96D15 328 aa12.71□□□□□ -0.37
FANCA-220ENST00000566409 SLC19A3Q9BZV2 496 aa12.71□□□□□ -0.37
FANCA-220ENST00000566409 NANSQ9NR45 359 aa12.71□□□□□ -0.37
FANCA-220ENST00000566409 CMTM6Q9NX76 183 aa12.71□□□□□ -0.37
FANCA-220ENST00000566409 CAPN7Q9Y6W3 813 aa12.71□□□□□ -0.37
FANCA-220ENST00000566409 ZNF726A6NNF4 738 aa12.7□□□□□ -0.38
FANCA-220ENST00000566409 HLA-HP01893 362 aa12.7□□□□□ -0.38
FANCA-220ENST00000566409 FUT4P22083 530 aa12.7□□□□□ -0.38
FANCA-220ENST00000566409 KDELR2P33947 212 aa12.7□□□□□ -0.38
FANCA-220ENST00000566409 ARR3P36575 388 aa12.7□□□□□ -0.38
FANCA-220ENST00000566409 SERPINF1P36955 418 aa12.7□□□□□ -0.38
FANCA-220ENST00000566409 MDH1P40925 334 aaKnown RBP12.7□□□□□ -0.38
FANCA-220ENST00000566409 UGT2B15P54855 530 aa12.7□□□□□ -0.38
FANCA-220ENST00000566409 CHRNB3Q05901 458 aa12.7□□□□□ -0.38
FANCA-220ENST00000566409 PIN1Q13526 163 aaPredicted RBP12.7□□□□□ -0.38
FANCA-220ENST00000566409 ERICH5Q6P6B1 374 aa12.7□□□□□ -0.38
FANCA-220ENST00000566409 LRFN4Q6PJG9 635 aa12.7□□□□□ -0.38
FANCA-220ENST00000566409 SLC35D2Q76EJ3 337 aa12.7□□□□□ -0.38
FANCA-220ENST00000566409 PCYOX1LQ8NBM8 494 aa12.7□□□□□ -0.38
FANCA-220ENST00000566409 OR6N1Q8NGY5 312 aa12.7□□□□□ -0.38
FANCA-220ENST00000566409 OR6X1Q8NH79 312 aa12.7□□□□□ -0.38
FANCA-220ENST00000566409 PFN4Q8NHR9 129 aa12.7□□□□□ -0.38
FANCA-220ENST00000566409 TMEM255BQ8WV15 326 aa12.7□□□□□ -0.38
FANCA-220ENST00000566409 PROX1Q92786 737 aa12.7□□□□□ -0.38
FANCA-220ENST00000566409 TMEM54Q969K7 222 aa12.7□□□□□ -0.38
FANCA-220ENST00000566409 RHNO1Q9BSD3 238 aa12.7□□□□□ -0.38
FANCA-220ENST00000566409 C20orf141Q9NUB4 165 aa12.7□□□□□ -0.38
FANCA-220ENST00000566409 GID8Q9NWU2 228 aa12.7□□□□□ -0.38
FANCA-220ENST00000566409 RIMS3Q9UJD0 308 aa12.7□□□□□ -0.38
FANCA-220ENST00000566409 ZNF229Q9UJW7 825 aa12.7□□□□□ -0.38
FANCA-220ENST00000566409 BAG5Q9UL15 447 aa12.7□□□□□ -0.38
FANCA-220ENST00000566409 MALRD1Q5VYJ5 2156 aa12.7□□□□□ -0.38
FANCA-220ENST00000566409 FBN1P35555 2871 aaKnown RBP12.7□□□□□ -0.38
FANCA-220ENST00000566409 IGHV2OR16-5A0A0B4J2B6 119 aa12.69□□□□□ -0.38
FANCA-220ENST00000566409 FAM220BPB1ANY3 271 aa12.69□□□□□ -0.38
FANCA-220ENST00000566409 SLC22A2O15244 555 aa12.69□□□□□ -0.38
FANCA-220ENST00000566409 F12P00748 615 aaPredicted RBP12.69□□□□□ -0.38
FANCA-220ENST00000566409 OR4A8P0C604 315 aa12.69□□□□□ -0.38
FANCA-220ENST00000566409 B4GALT1P15291 398 aa12.69□□□□□ -0.38
FANCA-220ENST00000566409 CSNK1A1P48729 337 aa12.69□□□□□ -0.38
FANCA-220ENST00000566409 EFNA4P52798 201 aa12.69□□□□□ -0.38
FANCA-220ENST00000566409 LSM11P83369 360 aaKnown RBP eCLIP12.69□□□□□ -0.38
FANCA-220ENST00000566409 PIGFQ07326 219 aa12.69□□□□□ -0.38
FANCA-220ENST00000566409 NPRL3Q12980 569 aa12.69□□□□□ -0.38
FANCA-220ENST00000566409 MELKQ14680 651 aa12.69□□□□□ -0.38
FANCA-220ENST00000566409 CYBRD1Q53TN4 286 aa12.69□□□□□ -0.38
FANCA-220ENST00000566409 VHLLQ6RSH7 139 aa12.69□□□□□ -0.38
FANCA-220ENST00000566409 ZNF813Q6ZN06 617 aa12.69□□□□□ -0.38
FANCA-220ENST00000566409 DEF8Q6ZN54 512 aa12.69□□□□□ -0.38
FANCA-220ENST00000566409 TREML1Q86YW5 311 aa12.69□□□□□ -0.38
FANCA-220ENST00000566409 SLC15A3Q8IY34 581 aa12.69□□□□□ -0.38
FANCA-220ENST00000566409 CCDC36Q8IYA8 594 aa12.69□□□□□ -0.38
FANCA-220ENST00000566409 MICU2Q8IYU8 434 aa12.69□□□□□ -0.38
FANCA-220ENST00000566409 NUP37Q8NFH4 326 aa12.69□□□□□ -0.38
FANCA-220ENST00000566409 OR2T12Q8NG77 320 aa12.69□□□□□ -0.38
FANCA-220ENST00000566409 FGFBP3Q8TAT2 258 aa12.69□□□□□ -0.38
FANCA-220ENST00000566409 MS4A3Q96HJ5 214 aa12.69□□□□□ -0.38
FANCA-220ENST00000566409 SORCS2Q96PQ0 1159 aa12.69□□□□□ -0.38
FANCA-220ENST00000566409 KCNS3Q9BQ31 491 aa12.69□□□□□ -0.38
FANCA-220ENST00000566409 ULBP2Q9BZM5 246 aa12.69□□□□□ -0.38
FANCA-220ENST00000566409 MOV10Q9HCE1 1003 aaKnown RBP12.69□□□□□ -0.38
FANCA-220ENST00000566409 ADAM21Q9UKJ8 722 aa12.69□□□□□ -0.38
FANCA-220ENST00000566409 PMF1-BGLAPU3KQ54 211 aa12.69□□□□□ -0.38
FANCA-220ENST00000566409 TMEM129A0AVI4 362 aa12.68□□□□□ -0.38
FANCA-220ENST00000566409 RNF13O43567 381 aa12.68□□□□□ -0.38
FANCA-220ENST00000566409 OR5F1O95221 314 aa12.68□□□□□ -0.38
FANCA-220ENST00000566409 OR6A2O95222 327 aa12.68□□□□□ -0.38
FANCA-220ENST00000566409 MT-ND1P03886 318 aa12.68□□□□□ -0.38
FANCA-220ENST00000566409 COX4I1P13073 169 aa12.68□□□□□ -0.38
FANCA-220ENST00000566409 ZNF14P17017 642 aaPredicted RBP12.68□□□□□ -0.38
FANCA-220ENST00000566409 FUT1P19526 365 aa12.68□□□□□ -0.38
FANCA-220ENST00000566409 THBS4P35443 961 aa12.68□□□□□ -0.38
FANCA-220ENST00000566409 CAPZA2P47755 286 aa12.68□□□□□ -0.38
FANCA-220ENST00000566409 TAS2R41P59536 307 aa12.68□□□□□ -0.38
FANCA-220ENST00000566409 RUNX1T1Q06455 604 aa12.68□□□□□ -0.38
FANCA-220ENST00000566409 EFNB3Q15768 340 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms