RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 TXNDC15Q96J42 360 aa17.49■□□□□ 0.39
CLN6-207ENST00000566347 ULBP2Q9BZM5 246 aa17.49■□□□□ 0.39
CLN6-207ENST00000566347 RAB1BQ9H0U4 201 aa17.49■□□□□ 0.39
CLN6-207ENST00000566347 TRAPPC13A5PLN9 417 aa17.48■□□□□ 0.39
CLN6-207ENST00000566347 ZNF503-AS2A6NEH8 195 aa17.48■□□□□ 0.39
CLN6-207ENST00000566347 SEC14L2O76054 403 aa17.48■□□□□ 0.39
CLN6-207ENST00000566347 ADORA3P0DMS8 318 aa17.48■□□□□ 0.39
CLN6-207ENST00000566347 NPR2P20594 1047 aa17.48■□□□□ 0.39
CLN6-207ENST00000566347 CD247P20963 164 aa17.48■□□□□ 0.39
CLN6-207ENST00000566347 CAMK2DQ13557 499 aa17.48■□□□□ 0.39
CLN6-207ENST00000566347 CYLC2Q14093 348 aaPredicted RBP17.48■□□□□ 0.39
CLN6-207ENST00000566347 TRMT5Q32P41 509 aaKnown RBP17.48■□□□□ 0.39
CLN6-207ENST00000566347 CYB5R2Q6BCY4 276 aa17.48■□□□□ 0.39
CLN6-207ENST00000566347 ZNF813Q6ZN06 617 aa17.48■□□□□ 0.39
CLN6-207ENST00000566347 ADAMTS16Q8TE57 1224 aa17.48■□□□□ 0.39
CLN6-207ENST00000566347 MPP4Q96JB8 637 aa17.48■□□□□ 0.39
CLN6-207ENST00000566347 SH3GL1Q99961 368 aa17.48■□□□□ 0.39
CLN6-207ENST00000566347 SLC19A3Q9BZV2 496 aa17.48■□□□□ 0.39
CLN6-207ENST00000566347 DENND2DQ9H6A0 471 aaPredicted RBP17.48■□□□□ 0.39
CLN6-207ENST00000566347 B3GNT2Q9NY97 397 aa17.48■□□□□ 0.39
CLN6-207ENST00000566347 LOC390937A0A1W2PQ73 354 aa17.47■□□□□ 0.39
CLN6-207ENST00000566347 VWC2LB2RUY7 222 aa17.47■□□□□ 0.39
CLN6-207ENST00000566347 hCG_2039718K7EN88 272 aa17.47■□□□□ 0.39
CLN6-207ENST00000566347 SERPINI2O75830 405 aa17.47■□□□□ 0.39
CLN6-207ENST00000566347 ERCC1P07992 297 aaPredicted RBP17.47■□□□□ 0.39
CLN6-207ENST00000566347 THBS4P35443 961 aa17.47■□□□□ 0.39
CLN6-207ENST00000566347 CSNK1A1P48729 337 aa17.47■□□□□ 0.39
CLN6-207ENST00000566347 LSM11P83369 360 aaKnown RBP eCLIP17.47■□□□□ 0.39
CLN6-207ENST00000566347 ZNF74Q16587 644 aa17.47■□□□□ 0.39
CLN6-207ENST00000566347 GSG1Q2KHT4 349 aa17.47■□□□□ 0.39
CLN6-207ENST00000566347 VMACQ2NL98 169 aa17.47■□□□□ 0.39
CLN6-207ENST00000566347 PODNL1Q6PEZ8 512 aa17.47■□□□□ 0.39
CLN6-207ENST00000566347 WDR88Q6ZMY6 472 aa17.47■□□□□ 0.39
CLN6-207ENST00000566347 ANKS4BQ8N8V4 417 aa17.47■□□□□ 0.39
CLN6-207ENST00000566347 VANGL1Q8TAA9 524 aaPredicted RBP17.47■□□□□ 0.39
CLN6-207ENST00000566347 TAMM41Q96BW9 452 aa17.47■□□□□ 0.39
CLN6-207ENST00000566347 PCDHAC1Q9H158 963 aa17.47■□□□□ 0.39
CLN6-207ENST00000566347 NANSQ9NR45 359 aa17.47■□□□□ 0.39
CLN6-207ENST00000566347 TMEM160Q9NX00 188 aa17.47■□□□□ 0.39
CLN6-207ENST00000566347 CDC42EP3Q9UKI2 254 aa17.47■□□□□ 0.39
CLN6-207ENST00000566347 SLC7A7Q9UM01 511 aa17.47■□□□□ 0.39
CLN6-207ENST00000566347 FBN1P35555 2871 aaKnown RBP17.46■□□□□ 0.39
CLN6-207ENST00000566347 MXRA5Q9NR99 2828 aa17.46■□□□□ 0.39
CLN6-207ENST00000566347 C11orf98E9PRG8 122 aa17.46■□□□□ 0.39
CLN6-207ENST00000566347 HLA-HP01893 362 aa17.46■□□□□ 0.39
CLN6-207ENST00000566347 CD79AP11912 226 aa17.46■□□□□ 0.39
CLN6-207ENST00000566347 IFNGR1P15260 489 aa17.46■□□□□ 0.39
CLN6-207ENST00000566347 NR4A2P43354 598 aa17.46■□□□□ 0.39
CLN6-207ENST00000566347 GZMKP49863 264 aa17.46■□□□□ 0.39
CLN6-207ENST00000566347 BIDP55957 195 aa17.46■□□□□ 0.39
CLN6-207ENST00000566347 ZP4Q12836 540 aa17.46■□□□□ 0.39
CLN6-207ENST00000566347 DAG1Q14118 895 aa17.46■□□□□ 0.39
CLN6-207ENST00000566347 COQ5Q5HYK3 327 aa17.46■□□□□ 0.39
CLN6-207ENST00000566347 NANOGP8Q6NSW7 305 aa17.46■□□□□ 0.39
CLN6-207ENST00000566347 CCDC80Q76M96 950 aa17.46■□□□□ 0.39
CLN6-207ENST00000566347 CXXC5Q7LFL8 322 aaKnown RBP17.46■□□□□ 0.39
CLN6-207ENST00000566347 RBM45Q8IUH3 476 aaKnown RBP17.46■□□□□ 0.39
CLN6-207ENST00000566347 ZNF540Q8NDQ6 660 aa17.46■□□□□ 0.39
CLN6-207ENST00000566347 OR4D11Q8NGI4 311 aa17.46■□□□□ 0.39
CLN6-207ENST00000566347 OR6X1Q8NH79 312 aa17.46■□□□□ 0.39
CLN6-207ENST00000566347 KCNK17Q96T54 332 aa17.46■□□□□ 0.39
CLN6-207ENST00000566347 FOXB1Q99853 325 aa17.46■□□□□ 0.39
CLN6-207ENST00000566347 TMEM120AQ9BXJ8 343 aa17.46■□□□□ 0.39
CLN6-207ENST00000566347 NANOGQ9H9S0 305 aa17.46■□□□□ 0.39
CLN6-207ENST00000566347 NOX3Q9HBY0 568 aa17.46■□□□□ 0.39
CLN6-207ENST00000566347 ZNF229Q9UJW7 825 aa17.46■□□□□ 0.39
CLN6-207ENST00000566347 FBXL3Q9UKT7 428 aa17.46■□□□□ 0.39
CLN6-207ENST00000566347 FBP2O00757 339 aa17.45■□□□□ 0.38
CLN6-207ENST00000566347 ENTPD5O75356 428 aa17.45■□□□□ 0.38
CLN6-207ENST00000566347 LYPD3O95274 346 aa17.45■□□□□ 0.38
CLN6-207ENST00000566347 CH25HO95992 272 aa17.45■□□□□ 0.38
CLN6-207ENST00000566347 NPPAP01160 153 aa17.45■□□□□ 0.38
CLN6-207ENST00000566347 THY1P04216 161 aa17.45■□□□□ 0.38
CLN6-207ENST00000566347 HIST1H2ABP04908 130 aa17.45■□□□□ 0.38
CLN6-207ENST00000566347 IGHV4-31P0DP07 118 aa17.45■□□□□ 0.38
CLN6-207ENST00000566347 TROVE2P10155 538 aaKnown RBP eCLIP17.45■□□□□ 0.38
CLN6-207ENST00000566347 B4GALT1P15291 398 aa17.45■□□□□ 0.38
CLN6-207ENST00000566347 GZMMP51124 257 aa17.45■□□□□ 0.38
CLN6-207ENST00000566347 SNTB2Q13425 540 aaKnown RBP17.45■□□□□ 0.38
CLN6-207ENST00000566347 GGTLC2Q14390 218 aa17.45■□□□□ 0.38
CLN6-207ENST00000566347 CARTPTQ16568 116 aa17.45■□□□□ 0.38
CLN6-207ENST00000566347 SLC35D2Q76EJ3 337 aa17.45■□□□□ 0.38
CLN6-207ENST00000566347 HIST3H2AQ7L7L0 130 aa17.45■□□□□ 0.38
CLN6-207ENST00000566347 SPATA21Q7Z572 469 aa17.45■□□□□ 0.38
CLN6-207ENST00000566347 OR8J3Q8NGG0 315 aa17.45■□□□□ 0.38
CLN6-207ENST00000566347 NEU4Q8WWR8 484 aaPredicted RBP17.45■□□□□ 0.38
CLN6-207ENST00000566347 HIST1H2ACQ93077 130 aa17.45■□□□□ 0.38
CLN6-207ENST00000566347 DOK1Q99704 481 aa17.45■□□□□ 0.38
CLN6-207ENST00000566347 ECSITQ9BQ95 431 aa17.45■□□□□ 0.38
CLN6-207ENST00000566347 ZNF426Q9BUY5 554 aa17.45■□□□□ 0.38
CLN6-207ENST00000566347 SPEF1Q9Y4P9 236 aa17.45■□□□□ 0.38
CLN6-207ENST00000566347 RTTNQ86VV8 2226 aa17.45■□□□□ 0.38
CLN6-207ENST00000566347 RNF13O43567 381 aa17.44■□□□□ 0.38
CLN6-207ENST00000566347 UBL3O95164 117 aa17.44■□□□□ 0.38
CLN6-207ENST00000566347 RAB36O95755 333 aa17.44■□□□□ 0.38
CLN6-207ENST00000566347 NR4A1P22736 598 aa17.44■□□□□ 0.38
CLN6-207ENST00000566347 MMEL1Q495T6 779 aa17.44■□□□□ 0.38
CLN6-207ENST00000566347 KRT80Q6KB66 452 aa17.44■□□□□ 0.38
CLN6-207ENST00000566347 PIWIL3Q7Z3Z3 882 aaKnown RBP17.44■□□□□ 0.38
CLN6-207ENST00000566347 WDFY1Q8IWB7 410 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms