RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 ZNF813Q6ZN06 617 aa15.85■□□□□ 0.13
USB1-213ENST00000566292 ZNF627Q7L945 461 aa15.85■□□□□ 0.13
USB1-213ENST00000566292 HDXQ7Z353 690 aa15.85■□□□□ 0.13
USB1-213ENST00000566292 PXKQ7Z7A4 578 aa15.85■□□□□ 0.13
USB1-213ENST00000566292 OR5J2Q8NH18 312 aa15.85■□□□□ 0.13
USB1-213ENST00000566292 TSPEARQ8WU66 669 aa15.85■□□□□ 0.13
USB1-213ENST00000566292 TAMM41Q96BW9 452 aa15.85■□□□□ 0.13
USB1-213ENST00000566292 ZNF75AQ96N20 296 aa15.85■□□□□ 0.13
USB1-213ENST00000566292 FOXN4Q96NZ1 517 aa15.85■□□□□ 0.13
USB1-213ENST00000566292 KCNK17Q96T54 332 aa15.85■□□□□ 0.13
USB1-213ENST00000566292 DOK1Q99704 481 aa15.85■□□□□ 0.13
USB1-213ENST00000566292 PIMREGQ9BSJ6 248 aa15.85■□□□□ 0.13
USB1-213ENST00000566292 ZNF224Q9NZL3 707 aa15.85■□□□□ 0.13
USB1-213ENST00000566292 TRIM33Q9UPN9 1127 aa15.85■□□□□ 0.13
USB1-213ENST00000566292 C11orf98E9PRG8 122 aa15.84■□□□□ 0.13
USB1-213ENST00000566292 SERPINI2O75830 405 aa15.84■□□□□ 0.13
USB1-213ENST00000566292 MT-ATP6P00846 226 aa15.84■□□□□ 0.13
USB1-213ENST00000566292 IGFBP1P08833 259 aaPredicted RBP15.84■□□□□ 0.13
USB1-213ENST00000566292 ADORA3P0DMS8 318 aa15.84■□□□□ 0.13
USB1-213ENST00000566292 NPR2P20594 1047 aa15.84■□□□□ 0.13
USB1-213ENST00000566292 AHCYP23526 432 aa15.84■□□□□ 0.13
USB1-213ENST00000566292 PCGF2P35227 344 aa15.84■□□□□ 0.13
USB1-213ENST00000566292 GZMMP51124 257 aa15.84■□□□□ 0.13
USB1-213ENST00000566292 CRYBA2P53672 197 aa15.84■□□□□ 0.13
USB1-213ENST00000566292 CARTPTQ16568 116 aa15.84■□□□□ 0.13
USB1-213ENST00000566292 KRT80Q6KB66 452 aa15.84■□□□□ 0.13
USB1-213ENST00000566292 SVOPLQ8N434 492 aa15.84■□□□□ 0.13
USB1-213ENST00000566292 OR10A6Q8NH74 314 aa15.84■□□□□ 0.13
USB1-213ENST00000566292 SPATA3Q8NHX4 192 aa15.84■□□□□ 0.13
USB1-213ENST00000566292 VANGL1Q8TAA9 524 aaPredicted RBP15.84■□□□□ 0.13
USB1-213ENST00000566292 ADAMTS16Q8TE57 1224 aa15.84■□□□□ 0.13
USB1-213ENST00000566292 MS4A3Q96HJ5 214 aa15.84■□□□□ 0.13
USB1-213ENST00000566292 ULBP2Q9BZM5 246 aa15.84■□□□□ 0.13
USB1-213ENST00000566292 VIPAS39Q9H9C1 493 aa15.84■□□□□ 0.13
USB1-213ENST00000566292 B3GAT2Q9NPZ5 323 aa15.84■□□□□ 0.13
USB1-213ENST00000566292 TMEM160Q9NX00 188 aa15.84■□□□□ 0.13
USB1-213ENST00000566292 POFUT2Q9Y2G5 429 aa15.84■□□□□ 0.13
USB1-213ENST00000566292 STAB1Q9NY15 2570 aa15.84■□□□□ 0.13
USB1-213ENST00000566292 IGHV4-61A0A0C4DH41 118 aa15.83■□□□□ 0.12
USB1-213ENST00000566292 A0A0G2JND7 137 aa15.83■□□□□ 0.12
USB1-213ENST00000566292 LOC390937A0A1W2PQ73 354 aa15.83■□□□□ 0.12
USB1-213ENST00000566292 ZNF726A6NNF4 738 aa15.83■□□□□ 0.12
USB1-213ENST00000566292 FBP2O00757 339 aa15.83■□□□□ 0.12
USB1-213ENST00000566292 IFNA2P01563 188 aa15.83■□□□□ 0.12
USB1-213ENST00000566292 CD79AP11912 226 aa15.83■□□□□ 0.12
USB1-213ENST00000566292 B4GALT1P15291 398 aa15.83■□□□□ 0.12
USB1-213ENST00000566292 ZNF14P17017 642 aaPredicted RBP15.83■□□□□ 0.12
USB1-213ENST00000566292 PIGFQ07326 219 aa15.83■□□□□ 0.12
USB1-213ENST00000566292 SNTB2Q13425 540 aaKnown RBP15.83■□□□□ 0.12
USB1-213ENST00000566292 DAG1Q14118 895 aa15.83■□□□□ 0.12
USB1-213ENST00000566292 ZNF74Q16587 644 aa15.83■□□□□ 0.12
USB1-213ENST00000566292 MSMPQ1L6U9 139 aa15.83■□□□□ 0.12
USB1-213ENST00000566292 GSG1Q2KHT4 349 aa15.83■□□□□ 0.12
USB1-213ENST00000566292 SPATA21Q7Z572 469 aa15.83■□□□□ 0.12
USB1-213ENST00000566292 PATL1Q86TB9 770 aaKnown RBP15.83■□□□□ 0.12
USB1-213ENST00000566292 SLC30A8Q8IWU4 369 aa15.83■□□□□ 0.12
USB1-213ENST00000566292 ZCCHC24Q8N2G6 241 aaKnown RBP15.83■□□□□ 0.12
USB1-213ENST00000566292 IL17RDQ8NFM7 739 aa15.83■□□□□ 0.12
USB1-213ENST00000566292 OR6N1Q8NGY5 312 aa15.83■□□□□ 0.12
USB1-213ENST00000566292 FOXB1Q99853 325 aa15.83■□□□□ 0.12
USB1-213ENST00000566292 MYOZ1Q9NP98 299 aaPredicted RBP15.83■□□□□ 0.12
USB1-213ENST00000566292 TAS2R5Q9NYW4 299 aa15.83■□□□□ 0.12
USB1-213ENST00000566292 CDC42EP3Q9UKI2 254 aa15.83■□□□□ 0.12
USB1-213ENST00000566292 SLC7A7Q9UM01 511 aa15.83■□□□□ 0.12
USB1-213ENST00000566292 CH25HO95992 272 aa15.82■□□□□ 0.12
USB1-213ENST00000566292 FAM157CP0CG43 387 aa15.82■□□□□ 0.12
USB1-213ENST00000566292 IFNGR1P15260 489 aa15.82■□□□□ 0.12
USB1-213ENST00000566292 NR4A1P22736 598 aa15.82■□□□□ 0.12
USB1-213ENST00000566292 CSNK1A1P48729 337 aa15.82■□□□□ 0.12
USB1-213ENST00000566292 BIDP55957 195 aa15.82■□□□□ 0.12
USB1-213ENST00000566292 VMACQ2NL98 169 aa15.82■□□□□ 0.12
USB1-213ENST00000566292 TTC33Q6PID6 262 aaPredicted RBP15.82■□□□□ 0.12
USB1-213ENST00000566292 CDK20Q8IZL9 346 aa15.82■□□□□ 0.12
USB1-213ENST00000566292 LRRC17Q8N6Y2 441 aa15.82■□□□□ 0.12
USB1-213ENST00000566292 ARIH2OSQ8N7S6 290 aa15.82■□□□□ 0.12
USB1-213ENST00000566292 SIKE1Q9BRV8 207 aa15.82■□□□□ 0.12
USB1-213ENST00000566292 ZNF426Q9BUY5 554 aa15.82■□□□□ 0.12
USB1-213ENST00000566292 BPESC1Q9GZL8 116 aa15.82■□□□□ 0.12
USB1-213ENST00000566292 RAB1BQ9H0U4 201 aa15.82■□□□□ 0.12
USB1-213ENST00000566292 PCDHAC1Q9H158 963 aa15.82■□□□□ 0.12
USB1-213ENST00000566292 SH3PXD2BA1X283 911 aa15.81■□□□□ 0.12
USB1-213ENST00000566292 TRAPPC13A5PLN9 417 aa15.81■□□□□ 0.12
USB1-213ENST00000566292 KPNA4O00629 521 aaPredicted RBP15.81■□□□□ 0.12
USB1-213ENST00000566292 LMX1BO60663 402 aa15.81■□□□□ 0.12
USB1-213ENST00000566292 STAMBPO95630 424 aa15.81■□□□□ 0.12
USB1-213ENST00000566292 ZNF35P13682 527 aa15.81■□□□□ 0.12
USB1-213ENST00000566292 H2AFXP16104 143 aaPredicted RBP15.81■□□□□ 0.12
USB1-213ENST00000566292 GZMKP49863 264 aa15.81■□□□□ 0.12
USB1-213ENST00000566292 ZP4Q12836 540 aa15.81■□□□□ 0.12
USB1-213ENST00000566292 METTL21CQ5VZV1 264 aa15.81■□□□□ 0.12
USB1-213ENST00000566292 NANOGP8Q6NSW7 305 aa15.81■□□□□ 0.12
USB1-213ENST00000566292 FBN3Q75N90 2809 aa15.81■□□□□ 0.12
USB1-213ENST00000566292 SLC35D2Q76EJ3 337 aa15.81■□□□□ 0.12
USB1-213ENST00000566292 CCDC80Q76M96 950 aa15.81■□□□□ 0.12
USB1-213ENST00000566292 TMEM54Q969K7 222 aa15.81■□□□□ 0.12
USB1-213ENST00000566292 MSI2Q96DH6 328 aaKnown RBP15.81■□□□□ 0.12
USB1-213ENST00000566292 PRSS27Q9BQR3 290 aa15.81■□□□□ 0.12
USB1-213ENST00000566292 NANOGQ9H9S0 305 aa15.81■□□□□ 0.12
USB1-213ENST00000566292 NANSQ9NR45 359 aa15.81■□□□□ 0.12
USB1-213ENST00000566292 FBXO9Q9UK97 447 aaPredicted RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms