RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 CCDC167Q9P0B6 97 aa10.94□□□□□ -0.66
RNF40-208ENST00000565995 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.94□□□□□ -0.66
RNF40-208ENST00000565995 B3GAT1Q9P2W7 334 aa10.94□□□□□ -0.66
RNF40-208ENST00000565995 GPR45Q9Y5Y3 372 aa10.94□□□□□ -0.66
RNF40-208ENST00000565995 PRKDCP78527 4128 aaKnown RBP10.94□□□□□ -0.66
RNF40-208ENST00000565995 J3QLI3 93 aa10.93□□□□□ -0.66
RNF40-208ENST00000565995 FSHBP01225 129 aa10.93□□□□□ -0.66
RNF40-208ENST00000565995 GKN3PP0CG01 181 aa10.93□□□□□ -0.66
RNF40-208ENST00000565995 PNMTP11086 282 aa10.93□□□□□ -0.66
RNF40-208ENST00000565995 ZNF43P17038 809 aa10.93□□□□□ -0.66
RNF40-208ENST00000565995 ANXA11P50995 505 aaKnown RBP10.93□□□□□ -0.66
RNF40-208ENST00000565995 COPZ1P61923 177 aa10.93□□□□□ -0.66
RNF40-208ENST00000565995 UFM1P61960 85 aa10.93□□□□□ -0.66
RNF40-208ENST00000565995 KLF10Q13118 480 aa10.93□□□□□ -0.66
RNF40-208ENST00000565995 MAPRE2Q15555 327 aa10.93□□□□□ -0.66
RNF40-208ENST00000565995 MMEL1Q495T6 779 aa10.93□□□□□ -0.66
RNF40-208ENST00000565995 RNF220Q5VTB9 566 aa10.93□□□□□ -0.66
RNF40-208ENST00000565995 SHISA2Q6UWI4 295 aa10.93□□□□□ -0.66
RNF40-208ENST00000565995 PEX5LQ8IYB4 626 aa10.93□□□□□ -0.66
RNF40-208ENST00000565995 GPR137CQ8N3F9 429 aa10.93□□□□□ -0.66
RNF40-208ENST00000565995 LRR1Q96L50 414 aa10.93□□□□□ -0.66
RNF40-208ENST00000565995 ZNF416Q9BWM5 594 aa10.93□□□□□ -0.66
RNF40-208ENST00000565995 TMPRSS13Q9BYE2 586 aa10.93□□□□□ -0.66
RNF40-208ENST00000565995 MYLK2Q9H1R3 596 aa10.93□□□□□ -0.66
RNF40-208ENST00000565995 ESM1Q9NQ30 184 aa10.93□□□□□ -0.66
RNF40-208ENST00000565995 ZIM2Q9NZV7 527 aa10.93□□□□□ -0.66
RNF40-208ENST00000565995 NOTCH1P46531 2555 aa10.92□□□□□ -0.66
RNF40-208ENST00000565995 LOC105371242A0A075B767 164 aa10.92□□□□□ -0.66
RNF40-208ENST00000565995 CCDC154A6NI56 674 aa10.92□□□□□ -0.66
RNF40-208ENST00000565995 SLC22A2O15244 555 aa10.92□□□□□ -0.66
RNF40-208ENST00000565995 DEAF1O75398 565 aaPredicted RBP10.92□□□□□ -0.66
RNF40-208ENST00000565995 HKR1P10072 659 aa10.92□□□□□ -0.66
RNF40-208ENST00000565995 POLR2JP52435 117 aaKnown RBP10.92□□□□□ -0.66
RNF40-208ENST00000565995 FOXL1Q12952 345 aa10.92□□□□□ -0.66
RNF40-208ENST00000565995 NPRL3Q12980 569 aa10.92□□□□□ -0.66
RNF40-208ENST00000565995 GSG1Q2KHT4 349 aa10.92□□□□□ -0.66
RNF40-208ENST00000565995 SPANXN4Q5MJ08 99 aa10.92□□□□□ -0.66
RNF40-208ENST00000565995 ACSM5Q6NUN0 579 aa10.92□□□□□ -0.66
RNF40-208ENST00000565995 NHLRC1Q6VVB1 395 aa10.92□□□□□ -0.66
RNF40-208ENST00000565995 THSD4Q6ZMP0 1018 aa10.92□□□□□ -0.66
RNF40-208ENST00000565995 ZNF836Q6ZNA1 936 aa10.92□□□□□ -0.66
RNF40-208ENST00000565995 TRPM8Q7Z2W7 1104 aa10.92□□□□□ -0.66
RNF40-208ENST00000565995 LRP11Q86VZ4 500 aa10.92□□□□□ -0.66
RNF40-208ENST00000565995 KDM8Q8N371 416 aa10.92□□□□□ -0.66
RNF40-208ENST00000565995 TRIML2Q8N7C3 387 aa10.92□□□□□ -0.66
RNF40-208ENST00000565995 PIK3C3Q8NEB9 887 aa10.92□□□□□ -0.66
RNF40-208ENST00000565995 OR52P1PQ8NH57 321 aa10.92□□□□□ -0.66
RNF40-208ENST00000565995 SLC35B4Q969S0 331 aa10.92□□□□□ -0.66
RNF40-208ENST00000565995 OR2M2Q96R28 347 aa10.92□□□□□ -0.66
RNF40-208ENST00000565995 LPAR2Q9HBW0 351 aa10.92□□□□□ -0.66
RNF40-208ENST00000565995 ZNF224Q9NZL3 707 aa10.92□□□□□ -0.66
RNF40-208ENST00000565995 CHST2Q9Y4C5 530 aa10.92□□□□□ -0.66
RNF40-208ENST00000565995 EBAG9O00559 213 aa10.91□□□□□ -0.66
RNF40-208ENST00000565995 ANGPT2O15123 496 aa10.91□□□□□ -0.66
RNF40-208ENST00000565995 PPIHO43447 177 aaKnown RBP10.91□□□□□ -0.66
RNF40-208ENST00000565995 PLPP2O43688 288 aa10.91□□□□□ -0.66
RNF40-208ENST00000565995 RGS9O75916 674 aaPredicted RBP10.91□□□□□ -0.66
RNF40-208ENST00000565995 NCR1O76036 304 aa10.91□□□□□ -0.66
RNF40-208ENST00000565995 NR2F1P10589 423 aa10.91□□□□□ -0.66
RNF40-208ENST00000565995 PRG2P13727 222 aa10.91□□□□□ -0.66
RNF40-208ENST00000565995 GATA3P23771 443 aa10.91□□□□□ -0.66
RNF40-208ENST00000565995 S100A3P33764 101 aa10.91□□□□□ -0.66
RNF40-208ENST00000565995 ALDH3B1P43353 468 aa10.91□□□□□ -0.66
RNF40-208ENST00000565995 RPS23P62266 143 aaKnown RBP10.91□□□□□ -0.66
RNF40-208ENST00000565995 UBA52P62987 128 aaKnown RBP10.91□□□□□ -0.66
RNF40-208ENST00000565995 LRRC74AQ0VAA2 488 aa10.91□□□□□ -0.66
RNF40-208ENST00000565995 TRMT5Q32P41 509 aaKnown RBP10.91□□□□□ -0.66
RNF40-208ENST00000565995 LIN52Q52LA3 116 aa10.91□□□□□ -0.66
RNF40-208ENST00000565995 COX20Q5RI15 118 aa10.91□□□□□ -0.66
RNF40-208ENST00000565995 PHYHD1Q5SRE7 291 aa10.91□□□□□ -0.66
RNF40-208ENST00000565995 C6orf89Q6UWU4 347 aa10.91□□□□□ -0.66
RNF40-208ENST00000565995 SNX32Q86XE0 403 aa10.91□□□□□ -0.66
RNF40-208ENST00000565995 VRK2Q86Y07 508 aa10.91□□□□□ -0.66
RNF40-208ENST00000565995 C20orf196Q8IYI0 205 aa10.91□□□□□ -0.66
RNF40-208ENST00000565995 CADM2Q8N3J6 435 aa10.91□□□□□ -0.66
RNF40-208ENST00000565995 FITM2Q8N6M3 262 aa10.91□□□□□ -0.66
RNF40-208ENST00000565995 GLB1L3Q8NCI6 653 aaPredicted RBP10.91□□□□□ -0.66
RNF40-208ENST00000565995 ADPRHL1Q8NDY3 354 aa10.91□□□□□ -0.66
RNF40-208ENST00000565995 NANPQ8TBE9 248 aa10.91□□□□□ -0.66
RNF40-208ENST00000565995 MS4A3Q96HJ5 214 aa10.91□□□□□ -0.66
RNF40-208ENST00000565995 NARFLQ9H6Q4 476 aa10.91□□□□□ -0.66
RNF40-208ENST00000565995 ZNF665Q9H7R5 613 aa10.91□□□□□ -0.66
RNF40-208ENST00000565995 C12orf10Q9HB07 376 aa10.91□□□□□ -0.66
RNF40-208ENST00000565995 NTN4Q9HB63 628 aa10.91□□□□□ -0.66
RNF40-208ENST00000565995 NKIRAS2Q9NYR9 191 aa10.91□□□□□ -0.66
RNF40-208ENST00000565995 CALML5Q9NZT1 146 aa10.91□□□□□ -0.66
RNF40-208ENST00000565995 MYEF2Q9P2K5 600 aaKnown RBP10.91□□□□□ -0.66
RNF40-208ENST00000565995 ZNF346Q9UL40 294 aaKnown RBP10.91□□□□□ -0.66
RNF40-208ENST00000565995 PCDHGB1Q9Y5G3 927 aa10.91□□□□□ -0.66
RNF40-208ENST00000565995 A0A0G2JMP0 313 aa10.9□□□□□ -0.66
RNF40-208ENST00000565995 A0A0X1KG70 313 aa10.9□□□□□ -0.66
RNF40-208ENST00000565995 MS4A18H0YCH9 400 aa10.9□□□□□ -0.66
RNF40-208ENST00000565995 AIM2O14862 343 aa10.9□□□□□ -0.66
RNF40-208ENST00000565995 TRAF3IP2O43734 574 aaPredicted RBP10.9□□□□□ -0.66
RNF40-208ENST00000565995 OR2T1O43869 369 aa10.9□□□□□ -0.66
RNF40-208ENST00000565995 AHSA1O95433 338 aa10.9□□□□□ -0.66
RNF40-208ENST00000565995 HLA-HP01893 362 aa10.9□□□□□ -0.66
RNF40-208ENST00000565995 TCN1P20061 433 aaPredicted RBP10.9□□□□□ -0.66
RNF40-208ENST00000565995 CRYBB2P43320 205 aa10.9□□□□□ -0.66
RNF40-208ENST00000565995 RPS5P46782 204 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms