RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 FHL1Q13642 323 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 PON3Q15166 354 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 OR7A5Q15622 319 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 MICAQ29983 383 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 EXOC3L2Q2M3D2 409 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 TRIM16LQ309B1 348 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 MS4A18Q3C1V0 323 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 TMEM211Q6ICI0 200 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 NHLRC1Q6VVB1 395 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 RPTNQ6XPR3 784 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 ZNF730Q6ZMV8 503 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 USP43Q70EL4 1123 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 H1FNTQ75WM6 255 aaPredicted RBP11.26□□□□□ -0.61
SF3B3-206ENST00000565990 RRM2BQ7LG56 351 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 SLC46A3Q7Z3Q1 461 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 ZER1Q7Z7L7 766 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 ADCK1Q86TW2 530 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 NRMQ8IXM6 262 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 SLC43A2Q8N370 569 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 TMEM99Q8N816 258 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 SCAIQ8N9R8 606 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 OR4K5Q8NGD3 323 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 PFN4Q8NHR9 129 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 RHOXF1Q8NHV9 184 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 RNF128Q8TEB7 428 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 TRIB1Q96RU8 372 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 TM9SF2Q99805 663 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 NAA11Q9BSU3 229 aaPredicted RBP11.26□□□□□ -0.61
SF3B3-206ENST00000565990 TAPBPLQ9BX59 468 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 NXF2Q9GZY0 626 aaKnown RBP11.26□□□□□ -0.61
SF3B3-206ENST00000565990 SP140LQ9H930 580 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 FKRPQ9H9S5 495 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 ZNF556Q9HAH1 456 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 GP6Q9HCN6 339 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 GLRX2Q9NS18 164 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 RHBDL2Q9NX52 303 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 MRPL39Q9NYK5 338 aaKnown RBP11.26□□□□□ -0.61
SF3B3-206ENST00000565990 ERVK-18Q9QC07 812 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 ZNF229Q9UJW7 825 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 ING1Q9UK53 422 aaPredicted RBP11.26□□□□□ -0.61
SF3B3-206ENST00000565990 MCTS1Q9ULC4 181 aaKnown RBP11.26□□□□□ -0.61
SF3B3-206ENST00000565990 TMCC3Q9ULS5 477 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 CORINQ9Y5Q5 1042 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 U3KQV3 271 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 NCOA6Q14686 2063 aaPredicted RBP11.26□□□□□ -0.61
SF3B3-206ENST00000565990 UBR5O95071 2799 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-206ENST00000565990 TRGV8A0A0C4DH27 118 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 EFCAB10A6NFE3 127 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 AQP7P3A6NL99 342 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 ZNF814B7Z6K7 855 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 LRRN3E7EW58 273 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 XPNPEP2O43895 674 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 MITFO75030 526 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-206ENST00000565990 PTP4A3O75365 173 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 WBP4O75554 376 aaKnown RBP11.25□□□□□ -0.61
SF3B3-206ENST00000565990 AKR7A3O95154 331 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 SYNGR4O95473 234 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 CH25HO95992 272 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 IFI30P13284 250 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 FMO3P31513 532 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 PMPCAQ10713 525 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 ZP4Q12836 540 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 FOXD4Q12950 439 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-206ENST00000565990 GUSBP1Q15486 140 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 ANKDD1AQ495B1 522 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 C4orf17Q53FE4 359 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 RNLSQ5VYX0 342 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 ZNF367Q7RTV3 350 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 MAMDC2Q7Z304 686 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-206ENST00000565990 ENTHD1Q8IYW4 607 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 CDK20Q8IZL9 346 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 MFSD4AQ8N468 514 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 RPRMLQ8N4K4 120 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 LRRC17Q8N6Y2 441 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 ZBTB8BQ8NAP8 495 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-206ENST00000565990 ADPRHL1Q8NDY3 354 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 OR10G2Q8NGC3 310 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 PRR7Q8TB68 274 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 FNDC9Q8TBE3 224 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 ROBO4Q8WZ75 1007 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 SLC25A36Q96CQ1 311 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 SGTBQ96EQ0 304 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 ZFP3Q96NJ6 502 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 COPS4Q9BT78 406 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 SF3B5Q9BWJ5 86 aaKnown RBP11.25□□□□□ -0.61
SF3B3-206ENST00000565990 NANSQ9NR45 359 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 TAS2R5Q9NYW4 299 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 HIVEP3Q5T1R4 2406 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 RELNP78509 3460 aa11.25□□□□□ -0.61
SF3B3-206ENST00000565990 hCG_2014768A0A024R1R8 64 aa11.24□□□□□ -0.61
SF3B3-206ENST00000565990 IGKV3D-15A0A087WSY6 115 aa11.24□□□□□ -0.61
SF3B3-206ENST00000565990 PNMA8CA0A1B0GUJ8 204 aa11.24□□□□□ -0.61
SF3B3-206ENST00000565990 ZNF716A6NP11 495 aa11.24□□□□□ -0.61
SF3B3-206ENST00000565990 CCL21O00585 134 aa11.24□□□□□ -0.61
SF3B3-206ENST00000565990 PLPP3O14495 311 aa11.24□□□□□ -0.61
SF3B3-206ENST00000565990 PIP5K1CO60331 668 aa11.24□□□□□ -0.61
SF3B3-206ENST00000565990 OR7A10O76100 309 aa11.24□□□□□ -0.61
SF3B3-206ENST00000565990 CCNB2O95067 398 aa11.24□□□□□ -0.61
SF3B3-206ENST00000565990 VAMP5O95183 116 aa11.24□□□□□ -0.61
SF3B3-206ENST00000565990 GASTP01350 101 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms