RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 EBF4Q9BQW3 602 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 MRPL37Q9BZE1 423 aaKnown RBP7.39□□□□□ -1.23
CAPN3-213ENST00000565173 TCF7L2Q9NQB0 619 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 ZNF446Q9NWS9 450 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 MED29Q9NX70 200 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 MRPL39Q9NYK5 338 aaKnown RBP7.39□□□□□ -1.23
CAPN3-213ENST00000565173 CCDC167Q9P0B6 97 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 USP22Q9UPT9 525 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 CMAHPQ9Y471 501 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 CORINQ9Y5Q5 1042 aa7.39□□□□□ -1.23
CAPN3-213ENST00000565173 PRORSD1PA6NEY8 169 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 HMGB1P1B2RPK0 211 aaPredicted RBP7.38□□□□□ -1.23
CAPN3-213ENST00000565173 SYNGR3O43761 229 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 MFN2O95140 757 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 LYPD3O95274 346 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 THY1P04216 161 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 CD79AP11912 226 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 NQO1P15559 274 aaKnown RBP7.38□□□□□ -1.23
CAPN3-213ENST00000565173 HNF1AP20823 631 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 COL8A2P25067 703 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 APEX1P27695 318 aaKnown RBP7.38□□□□□ -1.23
CAPN3-213ENST00000565173 AQP1P29972 269 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 CAPZA2P47755 286 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 CDH15P55291 814 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 PCBP3P57721 371 aaKnown RBP7.38□□□□□ -1.23
CAPN3-213ENST00000565173 IL1RL1Q01638 556 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 PUDPQ08623 228 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 PMS2P3Q13401 168 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 CAMK2DQ13557 499 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 SCARB2Q14108 478 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 NPTX1Q15818 432 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 FXNQ16595 210 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 DUSP7Q16829 419 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 GSG1Q2KHT4 349 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 ZNF813Q6ZN06 617 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 TSPYL5Q86VY4 417 aaPredicted RBP7.38□□□□□ -1.23
CAPN3-213ENST00000565173 CARM1Q86X55 608 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 KRT73Q86Y46 540 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 SKA3Q8IX90 412 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 FGFBP3Q8TAT2 258 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 C7orf26Q96N11 449 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 EPYCQ99645 322 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 TMEM43Q9BTV4 400 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 SPATA5L1Q9BVQ7 753 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 RACGAP1Q9H0H5 632 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 TPK1Q9H3S4 243 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 TMEM27Q9HBJ8 222 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 SLCO1B3Q9NPD5 702 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 TAS2R5Q9NYW4 299 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 MYEF2Q9P2K5 600 aaKnown RBP7.38□□□□□ -1.23
CAPN3-213ENST00000565173 REV1Q9UBZ9 1251 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 TESQ9UGI8 421 aaKnown RBP7.38□□□□□ -1.23
CAPN3-213ENST00000565173 TMEFF2Q9UIK5 374 aaPredicted RBP7.38□□□□□ -1.23
CAPN3-213ENST00000565173 NOX1Q9Y5S8 564 aa7.38□□□□□ -1.23
CAPN3-213ENST00000565173 ZNF726A6NNF4 738 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 WNT9BO14905 357 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 AKAP8O43823 692 aaKnown RBP7.37□□□□□ -1.23
CAPN3-213ENST00000565173 HPXP02790 462 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 ERCC1P07992 297 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-213ENST00000565173 PATE4P0C8F1 98 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 IFNGR1P15260 489 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 B4GALT1P15291 398 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 TCN1P20061 433 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-213ENST00000565173 PPIBP23284 216 aaKnown RBP7.37□□□□□ -1.23
CAPN3-213ENST00000565173 SLC6A2P23975 617 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 GLRXP35754 106 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 GIPRP48546 466 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 PTDSS1P48651 473 aaKnown RBP7.37□□□□□ -1.23
CAPN3-213ENST00000565173 SEC24CP53992 1094 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 DVL1P1P54792 670 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-213ENST00000565173 RGS8P57771 180 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-213ENST00000565173 STX1BP61266 288 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 RAB1AP62820 205 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 CCNIQ14094 377 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 AGKQ53H12 422 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 RUNDC3AQ59EK9 446 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 SWT1Q5T5J6 900 aaKnown RBP7.37□□□□□ -1.23
CAPN3-213ENST00000565173 LRFN4Q6PJG9 635 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 PTOV1Q86YD1 416 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 ARMC8Q8IUR7 673 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 RFLNBQ8N5W9 214 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 HIPK4Q8NE63 616 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 BHLHE22Q8NFJ8 381 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-213ENST00000565173 GPR32P1Q8NGA4 272 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 OR4D11Q8NGI4 311 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 OR5J2Q8NH18 312 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 TMEM54Q969K7 222 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 ARHGDIGQ99819 225 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 FOXB1Q99853 325 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 CPPED1Q9BRF8 314 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-213ENST00000565173 CCDC28BQ9BUN5 200 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 ASPNQ9BXN1 380 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 ULBP2Q9BZM5 246 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 MS4A5Q9H3V2 200 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 DENND2DQ9H6A0 471 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-213ENST00000565173 DYNLRB1Q9NP97 96 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 FZR1Q9UM11 496 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 POFUT2Q9Y2G5 429 aa7.37□□□□□ -1.23
CAPN3-213ENST00000565173 EVPLLA8MZ36 301 aa7.36□□□□□ -1.23
CAPN3-213ENST00000565173 M0R233 179 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms