RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 FAM122BQ7Z309 247 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 PXKQ7Z7A4 578 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 GPAT4Q86UL3 456 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 JAZF1Q86VZ6 243 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 CCDC103Q8IW40 242 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 UEVLDQ8IX04 471 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 ZNF786Q8N393 782 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 SDR9C7Q8NEX9 313 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 OR4K13Q8NH42 304 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 APH1BQ8WW43 257 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 SARAFQ96BY9 339 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 RASD2Q96D21 266 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 WDYHV1Q96HA8 205 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 ZNF845Q96IR2 970 aaPredicted RBP9.89□□□□□ -0.83
SF3B3-205ENST00000564899 Q96M85 177 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 GPR137Q96N19 417 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 OXGR1Q96P68 337 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 UCN2Q96RP3 112 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 TXNIPQ9H3M7 391 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 PAQR5Q9NXK6 330 aaPredicted RBP9.89□□□□□ -0.83
SF3B3-205ENST00000564899 KLHL13Q9P2N7 655 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 B3GAT1Q9P2W7 334 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 ZNF346Q9UL40 294 aaKnown RBP9.89□□□□□ -0.83
SF3B3-205ENST00000564899 GPR52Q9Y2T5 361 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 NOX1Q9Y5S8 564 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 MED12Q93074 2177 aa9.89□□□□□ -0.83
SF3B3-205ENST00000564899 A0A1B0GTH9 108 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 LOC102725191A0A1B0GVB3 256 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 NPIPB13A6NJU9 1138 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 NPIPB4C9JG80 1138 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 NPIPA2E9PIF3 369 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 NPIPA3F8WFD2 350 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 XKRYO14609 159 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 WBP4O75554 376 aaKnown RBP9.88□□□□□ -0.83
SF3B3-205ENST00000564899 WISP2O76076 250 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 VAMP5O95183 116 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 IFNGR1P15260 489 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 HIST1H1CP16403 213 aaKnown RBP9.88□□□□□ -0.83
SF3B3-205ENST00000564899 ZNF43P17038 809 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 PAICSP22234 425 aaKnown RBP9.88□□□□□ -0.83
SF3B3-205ENST00000564899 FMO3P31513 532 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 ACVR1BP36896 505 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 CHN2P52757 468 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 RPL27P61353 136 aaKnown RBP9.88□□□□□ -0.83
SF3B3-205ENST00000564899 EFNB1P98172 346 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 TEKQ02763 1124 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.88□□□□□ -0.83
SF3B3-205ENST00000564899 CRMP1Q14194 572 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 MELKQ14680 651 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 MESTQ5EB52 335 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 EMC4Q5J8M3 183 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 C6orf141Q5SZD1 244 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 EEF1A1P5Q5VTE0 462 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 ABLIM2Q6H8Q1 611 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 SLC35D2Q76EJ3 337 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 CXXC5Q7LFL8 322 aaKnown RBP9.88□□□□□ -0.83
SF3B3-205ENST00000564899 GHDCQ8N2G8 530 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 CISD2Q8N5K1 135 aaKnown RBP9.88□□□□□ -0.83
SF3B3-205ENST00000564899 SLC37A3Q8NCC5 494 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 OR52E2Q8NGJ4 325 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 ZNF519Q8TB69 540 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 ROBO4Q8WZ75 1007 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 MARVELD3Q96A59 401 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 OTULINQ96BN8 352 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 LRR1Q96L50 414 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 Q96MT0 163 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 NR1H4Q96RI1 486 aaPredicted RBP9.88□□□□□ -0.83
SF3B3-205ENST00000564899 PRDM14Q9GZV8 571 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 FN3KQ9H479 309 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 CLN6Q9NWW5 311 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 DNAJC27Q9NZQ0 273 aa9.88□□□□□ -0.83
SF3B3-205ENST00000564899 MCTS1Q9ULC4 181 aaKnown RBP9.88□□□□□ -0.83
SF3B3-205ENST00000564899 MPDZO75970 2070 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 SVILO95425 2214 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 OR14I1A6ND48 311 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 A6NIZ1 184 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 FAM183AA6NL82 134 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 PRR23D1E9PI22 279 aaPredicted RBP9.87□□□□□ -0.83
SF3B3-205ENST00000564899 TRAF3IP2O43734 574 aaPredicted RBP9.87□□□□□ -0.83
SF3B3-205ENST00000564899 CYTIPO60759 359 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 ENTPD6O75354 484 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 SMNDC1O75940 238 aaKnown RBP eCLIP9.87□□□□□ -0.83
SF3B3-205ENST00000564899 BCL10O95999 233 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 RPSAP08865 295 aaKnown RBP9.87□□□□□ -0.83
SF3B3-205ENST00000564899 PRR23D2P0DMB1 279 aaPredicted RBP9.87□□□□□ -0.83
SF3B3-205ENST00000564899 ACVR2AP27037 513 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 RAP1BP61224 184 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 RAP1AP62834 184 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 ITGADQ13349 1161 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 PON3Q15166 354 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 POU4F3Q15319 338 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 OCLNQ16625 522 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 KRTCAP3Q53RY4 240 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 TMEM201Q5SNT2 666 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 SLC25A30Q5SVS4 291 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 ARMC4Q5T2S8 1044 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 MEDAGQ5VYS4 303 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 FAM205BPQ63HN1 556 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 ZNF324BQ6AW86 544 aaPredicted RBP9.87□□□□□ -0.83
SF3B3-205ENST00000564899 LAIR2Q6ISS4 152 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms