RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 HAS2Q92819 552 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 TMEM80Q96HE8 168 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 LURAP1Q96LR2 239 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 ZNF578Q96N58 590 aaPredicted RBP3.12□□□□□ -1.91
CHD9-212ENST00000564641 SPATA13Q96N96 652 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 RPRD1AQ96P16 312 aaPredicted RBP3.12□□□□□ -1.91
CHD9-212ENST00000564641 OPALINQ96PE5 141 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 CCM2Q9BSQ5 444 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 C9orf16Q9BUW7 83 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 KIFC1Q9BW19 673 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 DPEP3Q9H4B8 488 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 RPF1Q9H9Y2 349 aaKnown RBP3.12□□□□□ -1.91
CHD9-212ENST00000564641 EFCAB1Q9HAE3 211 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 NTN4Q9HB63 628 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 POLE4Q9NR33 117 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 CCDC59Q9P031 241 aaKnown RBP3.12□□□□□ -1.91
CHD9-212ENST00000564641 MARCOQ9UEW3 520 aaPredicted RBP3.12□□□□□ -1.91
CHD9-212ENST00000564641 WARS2Q9UGM6 360 aaKnown RBP3.12□□□□□ -1.91
CHD9-212ENST00000564641 SH3BGRL2Q9UJC5 107 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 STOML2Q9UJZ1 356 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 DIMT1Q9UNQ2 313 aaKnown RBP3.12□□□□□ -1.91
CHD9-212ENST00000564641 PRG3Q9Y2Y8 225 aaPredicted RBP3.12□□□□□ -1.91
CHD9-212ENST00000564641 U3KQV3 271 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 MYO15AQ9UKN7 3530 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 WDR87Q6ZQQ6 2873 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 ZNF292O60281 2723 aa3.12□□□□□ -1.91
CHD9-212ENST00000564641 OTOGLQ3ZCN5 2332 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 CNOT1A5YKK6 2376 aaKnown RBP3.11□□□□□ -1.91
CHD9-212ENST00000564641 RALGAPA1Q6GYQ0 2036 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 IGHV3-16A0A0C4DH30 117 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 FAM168BA1KXE4 195 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 A8MVM7 634 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 LEUTXA8MZ59 168 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 F8WDY8 70 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 H3BMM5 538 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 CCL24O00175 119 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 PRRG1O14668 218 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 ANGPT2O15123 496 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 ARPC1BO15143 372 aaKnown RBP3.11□□□□□ -1.91
CHD9-212ENST00000564641 INPP4BO15327 924 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 NME2P1O60361 137 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 SNNO75324 88 aaPredicted RBP3.11□□□□□ -1.91
CHD9-212ENST00000564641 BCAS1O75363 584 aaPredicted RBP3.11□□□□□ -1.91
CHD9-212ENST00000564641 ECI2O75521 394 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 UPK1BO75841 260 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 ZMPSTE24O75844 475 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 B3GAT3O94766 335 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 KCNK2O95069 426 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 STBD1O95210 358 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 OR6A2O95222 327 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 LYPLA2O95372 231 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 PTTG1O95997 202 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 SFTPBP07988 381 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 RPS17P08708 135 aaKnown RBP3.11□□□□□ -1.91
CHD9-212ENST00000564641 CT45A8P0DMV1 189 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 CT45A9P0DMV2 189 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 MBL2P11226 248 aaPredicted RBP3.11□□□□□ -1.91
CHD9-212ENST00000564641 PSKH1P11801 424 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 IL7P13232 177 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 ICAM2P13598 275 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 SPNP16150 400 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 GOT1P17174 413 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 XRCC1P18887 633 aaPredicted RBP3.11□□□□□ -1.91
CHD9-212ENST00000564641 RPL9P32969 192 aaKnown RBP3.11□□□□□ -1.91
CHD9-212ENST00000564641 SERPINB5P36952 375 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 NSFP46459 744 aaKnown RBP3.11□□□□□ -1.91
CHD9-212ENST00000564641 SLC1A6P48664 564 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 MARCKSL1P49006 195 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 SLC11A1P49279 550 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 NUMBP49757 651 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 NUDT2P50583 147 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 CCR4P51679 360 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 ARHGDIAP52565 204 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 HSD17B7P56937 341 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 SLC26A5P58743 744 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 GPX6P59796 221 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 ENPEPQ07075 957 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 MFGE8Q08431 387 aaPredicted RBP3.11□□□□□ -1.91
CHD9-212ENST00000564641 RIPPLY1Q0D2K3 151 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 BST2Q10589 180 aaKnown RBP3.11□□□□□ -1.91
CHD9-212ENST00000564641 ABRQ12979 859 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 SCGB2A2Q13296 93 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 GPR50Q13585 617 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 MEF2DQ14814 521 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 PON2Q15165 354 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 TSC22D1Q15714 1073 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 MLF2Q15773 248 aaPredicted RBP3.11□□□□□ -1.91
CHD9-212ENST00000564641 PSMD5Q16401 504 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 SLC36A3Q495N2 470 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 YIF1BQ5BJH7 314 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 CT45A2Q5DJT8 189 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 BRMS1LQ5PSV4 323 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 RBM48Q5RL73 367 aaKnown RBP3.11□□□□□ -1.91
CHD9-212ENST00000564641 UTF1Q5T230 341 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 LINC00242Q5T6M2 205 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 ZNF776Q68DI1 518 aaPredicted RBP3.11□□□□□ -1.91
CHD9-212ENST00000564641 ZCCHC12Q6PEW1 402 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 ZNF773Q6PK81 442 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 XKRXQ6PP77 449 aa3.11□□□□□ -1.91
CHD9-212ENST00000564641 ARSKQ6UWY0 536 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms