RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 KIR2DS4P43632 304 aa3.27□□□□□ -1.89
LINC00560-201ENST00000564593 OGDHQ02218 1023 aa3.27□□□□□ -1.89
LINC00560-201ENST00000564593 TLE4Q04727 773 aa3.27□□□□□ -1.89
LINC00560-201ENST00000564593 DDX39BQ13838 428 aaKnown RBP3.27□□□□□ -1.89
LINC00560-201ENST00000564593 CCDC14Q49A88 953 aa3.27□□□□□ -1.89
LINC00560-201ENST00000564593 Q6ZN92 141 aa3.27□□□□□ -1.89
LINC00560-201ENST00000564593 SLC26A11Q86WA9 606 aa3.27□□□□□ -1.89
LINC00560-201ENST00000564593 NBPF5PQ86XG9 351 aaPredicted RBP3.27□□□□□ -1.89
LINC00560-201ENST00000564593 ECHDC2Q86YB7 292 aa3.27□□□□□ -1.89
LINC00560-201ENST00000564593 C6orf223Q8N319 242 aa3.27□□□□□ -1.89
LINC00560-201ENST00000564593 CMTM7Q96FZ5 175 aa3.27□□□□□ -1.89
LINC00560-201ENST00000564593 IMMP1LQ96LU5 166 aa3.27□□□□□ -1.89
LINC00560-201ENST00000564593 OXGR1Q96P68 337 aa3.27□□□□□ -1.89
LINC00560-201ENST00000564593 TSG101Q99816 390 aa3.27□□□□□ -1.89
LINC00560-201ENST00000564593 NAT9Q9BTE0 207 aa3.27□□□□□ -1.89
LINC00560-201ENST00000564593 ACTR6Q9GZN1 396 aa3.27□□□□□ -1.89
LINC00560-201ENST00000564593 RABL2BQ9UNT1 228 aa3.27□□□□□ -1.89
LINC00560-201ENST00000564593 ASF1AQ9Y294 204 aa3.27□□□□□ -1.89
LINC00560-201ENST00000564593 TRPM3Q9HCF6 1732 aaPredicted RBP3.27□□□□□ -1.89
LINC00560-201ENST00000564593 ALS2Q96Q42 1657 aa3.27□□□□□ -1.89
LINC00560-201ENST00000564593 TCHHQ07283 1943 aa3.27□□□□□ -1.89
LINC00560-201ENST00000564593 RFX7Q2KHR2 1363 aa3.27□□□□□ -1.89
LINC00560-201ENST00000564593 SYNRGQ9UMZ2 1314 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 TDRD6O60522 2096 aaKnown RBP3.26□□□□□ -1.89
LINC00560-201ENST00000564593 BTBD17A6NE02 478 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 OR52A4PA6NMU1 304 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 A8MU10 97 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 HSD17B6O14756 317 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 DNAH10OSP0CZ25 163 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 CD1BP29016 333 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 IL12AP29459 219 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 EPS15P42566 896 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 GSSP48637 474 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 KPNA2P52292 529 aaKnown RBP3.26□□□□□ -1.89
LINC00560-201ENST00000564593 NSDHLQ15738 373 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 IL17AQ16552 155 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 MARCH8Q5T0T0 291 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 TMIGD1Q6UXZ0 262 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 MTERF4Q7Z6M4 381 aaKnown RBP3.26□□□□□ -1.89
LINC00560-201ENST00000564593 TGIF2LXQ8IUE1 241 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 OR10G3Q8NGC4 313 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 OR51S1Q8NGJ8 323 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 FAM110BQ8TC76 370 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 N4BP2L2Q92802 583 aaPredicted RBP3.26□□□□□ -1.89
LINC00560-201ENST00000564593 FBXO32Q969P5 355 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 P2RY13Q9BPV8 354 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 TRIM62Q9BVG3 475 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 PLGRKTQ9HBL7 147 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 NPTNQ9Y639 398 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 CDH10Q9Y6N8 788 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 PKD1L3Q7Z443 1732 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 MYH7P12883 1935 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 ADAMTSL3P82987 1691 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 CEMIPQ8WUJ3 1361 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 RGPD2P0DJD1 1756 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 ARFGEF2Q9Y6D5 1785 aa3.26□□□□□ -1.89
LINC00560-201ENST00000564593 RLFQ13129 1914 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 NSG1A0A0A6YYJ2 146 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 PALMO75781 387 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 IGLV1-47P01700 117 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 TPM3P06753 285 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 TPM2P07951 284 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 OPRD1P41143 372 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 RPL23AP62750 156 aaKnown RBP3.25□□□□□ -1.89
LINC00560-201ENST00000564593 GNB2P62879 340 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 OR5I1Q13606 314 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 C1orf100Q5SVJ3 147 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 ENPP6Q6UWR7 440 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 RUFY3Q7L099 469 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 NKAPP1Q8N9T2 125 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 NT5C3BQ969T7 300 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.25□□□□□ -1.89
LINC00560-201ENST00000564593 TMEM101Q96IK0 257 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 ZNF641Q96N77 438 aaPredicted RBP3.25□□□□□ -1.89
LINC00560-201ENST00000564593 ROPN1BQ9BZX4 212 aaPredicted RBP3.25□□□□□ -1.89
LINC00560-201ENST00000564593 C20orf85Q9H1P6 137 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 AZI2Q9H6S1 392 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 SLC25A22Q9H936 323 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 ZNF639Q9UID6 485 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 CELA1Q9UNI1 258 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 KCNIP3Q9Y2W7 256 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 PHF3Q92576 2039 aaKnown RBP3.25□□□□□ -1.89
LINC00560-201ENST00000564593 USP42Q9H9J4 1324 aaKnown RBP3.25□□□□□ -1.89
LINC00560-201ENST00000564593 MRC1P22897 1456 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 ARHGEF35A5YM69 484 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 USP27XA6NNY8 438 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 A8MUA0 341 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 TOM1O60784 492 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 SERPINA3P01011 423 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 ELK1P19419 428 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 NCF2P19878 526 aaPredicted RBP3.25□□□□□ -1.89
LINC00560-201ENST00000564593 PEX19P40855 299 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 GLP1RP43220 463 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 ARRB1P49407 418 aaPredicted RBP3.25□□□□□ -1.89
LINC00560-201ENST00000564593 CDH4P55283 916 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 PRPS1P60891 318 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 ZNF763Q0D2J5 394 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 RABL6Q3YEC7 729 aaPredicted RBP3.25□□□□□ -1.89
LINC00560-201ENST00000564593 IL34Q6ZMJ4 242 aa3.25□□□□□ -1.89
LINC00560-201ENST00000564593 PRSS41Q7RTY9 318 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms