RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 NIPAL3Q6P499 406 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 TMEM154Q6P9G4 183 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 AHSA2Q719I0 299 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 MEPCEQ7L2J0 689 aaKnown RBP9.07□□□□□ -0.96
SMG1-208ENST00000563448 EXD3Q8N9H8 876 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 Q8NA96 180 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 OR9Q1Q8NGQ5 310 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 ZNRF4Q8WWF5 429 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 CPNE4Q96A23 557 aaPredicted RBP9.07□□□□□ -0.96
SMG1-208ENST00000563448 PNPLA2Q96AD5 504 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 ZHX1-C8orf76Q96EF9 292 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 SIGLEC11Q96RL6 698 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 BATF3Q9NR55 127 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 H2AFY2Q9P0M6 372 aaPredicted RBP9.07□□□□□ -0.96
SMG1-208ENST00000563448 TUBD1Q9UJT1 453 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 NPIPA1Q9UND3 350 aa9.07□□□□□ -0.96
SMG1-208ENST00000563448 RPL36Q9Y3U8 105 aaKnown RBP9.07□□□□□ -0.96
SMG1-208ENST00000563448 FREM1Q5H8C1 2179 aa9.06□□□□□ -0.96
SMG1-208ENST00000563448 AQP7O14520 342 aa9.06□□□□□ -0.96
SMG1-208ENST00000563448 ZNHIT1O43257 154 aa9.06□□□□□ -0.96
SMG1-208ENST00000563448 VAMP5O95183 116 aa9.06□□□□□ -0.96
SMG1-208ENST00000563448 ADRA2AP08913 450 aa9.06□□□□□ -0.96
SMG1-208ENST00000563448 ZNF43P17038 809 aa9.06□□□□□ -0.96
SMG1-208ENST00000563448 PAICSP22234 425 aaKnown RBP9.06□□□□□ -0.96
SMG1-208ENST00000563448 HTR1FP30939 366 aa9.06□□□□□ -0.96
SMG1-208ENST00000563448 DAP3P51398 398 aaKnown RBP9.06□□□□□ -0.96
SMG1-208ENST00000563448 BIDP55957 195 aa9.06□□□□□ -0.96
SMG1-208ENST00000563448 RPS3AP61247 264 aaKnown RBP9.06□□□□□ -0.96
SMG1-208ENST00000563448 MVKQ03426 396 aa9.06□□□□□ -0.96
SMG1-208ENST00000563448 SLC17A1Q14916 467 aa9.06□□□□□ -0.96
SMG1-208ENST00000563448 ABLIM2Q6H8Q1 611 aa9.06□□□□□ -0.96
SMG1-208ENST00000563448 PLXDC2Q6UX71 529 aa9.06□□□□□ -0.96
SMG1-208ENST00000563448 B3GLCTQ6Y288 498 aa9.06□□□□□ -0.96
SMG1-208ENST00000563448 CREB3L2Q70SY1 520 aa9.06□□□□□ -0.96
SMG1-208ENST00000563448 GID4Q8IVV7 300 aa9.06□□□□□ -0.96
SMG1-208ENST00000563448 IPCEF1Q8WWN9 437 aaPredicted RBP9.06□□□□□ -0.96
SMG1-208ENST00000563448 KISS1RQ969F8 398 aaPredicted RBP9.06□□□□□ -0.96
SMG1-208ENST00000563448 TSSK2Q96PF2 358 aa9.06□□□□□ -0.96
SMG1-208ENST00000563448 SNX18Q96RF0 628 aa9.06□□□□□ -0.96
SMG1-208ENST00000563448 COPS4Q9BT78 406 aa9.06□□□□□ -0.96
SMG1-208ENST00000563448 EMC6Q9BV81 110 aa9.06□□□□□ -0.96
SMG1-208ENST00000563448 OR51V1Q9H2C8 321 aa9.06□□□□□ -0.96
SMG1-208ENST00000563448 TIGARQ9NQ88 270 aa9.06□□□□□ -0.96
SMG1-208ENST00000563448 RPRD1BQ9NQG5 326 aaKnown RBP9.06□□□□□ -0.96
SMG1-208ENST00000563448 ASB6Q9NWX5 421 aa9.06□□□□□ -0.96
SMG1-208ENST00000563448 SCOCQ9UIL1 159 aa9.06□□□□□ -0.96
SMG1-208ENST00000563448 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.06□□□□□ -0.96
SMG1-208ENST00000563448 BSNQ9UPA5 3926 aa9.06□□□□□ -0.96
SMG1-208ENST00000563448 ZGRF1Q86YA3 2104 aa9.06□□□□□ -0.96
SMG1-208ENST00000563448 A0A087WXM4 84 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 TRIM64CA6NLI5 447 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 ZNF716A6NP11 495 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 DCTN6O00399 190 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 CYTIPO60759 359 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 TRMUO75648 421 aaKnown RBP9.05□□□□□ -0.96
SMG1-208ENST00000563448 RENP00797 406 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 CRYABP02511 175 aaKnown RBP9.05□□□□□ -0.96
SMG1-208ENST00000563448 STSP08842 583 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 ATP6V1B1P15313 513 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 SPI1P17947 270 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 SLC25A1P53007 311 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 C1DQ13901 141 aaKnown RBP9.05□□□□□ -0.96
SMG1-208ENST00000563448 KLHL12Q53G59 568 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 ZNF773Q6PK81 442 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 FCRLAQ7L513 359 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 ADCK1Q86TW2 530 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 PM20D2Q8IYS1 436 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 ZIC4Q8N9L1 334 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 OR9K2Q8NGE7 335 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 RFKQ969G6 155 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 RNFT2Q96EX2 444 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 KCNK17Q96T54 332 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 TEAD3Q99594 435 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 SF3B5Q9BWJ5 86 aaKnown RBP9.05□□□□□ -0.96
SMG1-208ENST00000563448 MRPS26Q9BYN8 205 aaKnown RBP9.05□□□□□ -0.96
SMG1-208ENST00000563448 PRDM14Q9GZV8 571 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 SRA1Q9HD15 236 aaKnown RBP9.05□□□□□ -0.96
SMG1-208ENST00000563448 MRPS18AQ9NVS2 196 aaKnown RBP9.05□□□□□ -0.96
SMG1-208ENST00000563448 PAQR5Q9NXK6 330 aaPredicted RBP9.05□□□□□ -0.96
SMG1-208ENST00000563448 CNOT2Q9NZN8 540 aaKnown RBP9.05□□□□□ -0.96
SMG1-208ENST00000563448 VSX1Q9NZR4 365 aaPredicted RBP9.05□□□□□ -0.96
SMG1-208ENST00000563448 CAMK2AQ9UQM7 478 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 A0A1B0GTH9 108 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 SLC22A23A1A5C7 686 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 PRSS37A4D1T9 235 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 SLC35F4A4IF30 521 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 EFCAB10A6NFE3 127 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 SNTNA6NMZ2 147 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 NPIPA2E9PIF3 369 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 NPIPA3F8WFD2 350 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 XKRYO14609 159 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 RGS10O43665 173 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 MT-ND2P03891 347 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 CDK1P06493 297 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 PIPP12273 146 aaPredicted RBP9.05□□□□□ -0.96
SMG1-208ENST00000563448 GSTT1P30711 240 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 MTNR1AP48039 350 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 CLDN17P56750 224 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 ST3GAL4Q11206 333 aa9.05□□□□□ -0.96
SMG1-208ENST00000563448 BLMHQ13867 455 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms