RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 OR4Q3Q8NH05 313 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 BBS10Q8TAM1 723 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 BRIX1Q8TDN6 353 aaKnown RBP12.16□□□□□ -0.46
CLK3-206ENST00000562078 CPNE4Q96A23 557 aaPredicted RBP12.16□□□□□ -0.46
CLK3-206ENST00000562078 HS6ST2Q96MM7 605 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 F2RL3Q96RI0 385 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 INSM2Q96T92 566 aaPredicted RBP12.16□□□□□ -0.46
CLK3-206ENST00000562078 NEU1Q99519 415 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 TGIF2Q9GZN2 237 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 LAT2Q9GZY6 243 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 TOLLIPQ9H0E2 274 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 XKR8Q9H6D3 395 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 OPA3Q9H6K4 179 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 PELI2Q9HAT8 420 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 ABRACLQ9P1F3 81 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 SCN3AQ9NY46 2000 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 A0A1W2PQF6 199 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 GPR89AB7ZAQ6 455 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 IMPA2O14732 288 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 BCL2L11O43521 198 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 GPR37L1O60883 481 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 GPR89BP0CG08 455 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 AVPR2P30518 371 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 ADPRHP54922 357 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 BDH1Q02338 343 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 MAPK14Q16539 360 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 GFOD2Q3B7J2 385 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 KHDRBS2Q5VWX1 349 aaKnown RBP12.16□□□□□ -0.46
CLK3-206ENST00000562078 MRGPREQ86SM8 312 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 TMEM200AQ86VY9 491 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 KCNRGQ8N5I3 272 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 FCAMRQ8WWV6 532 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 ZNF354BQ96LW1 612 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 C1QTNF2Q9BXJ5 285 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 MS4A8Q9BY19 250 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 SLC17A9Q9BYT1 436 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 FBRSQ9HAH7 460 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 TRIM36Q9NQ86 728 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 SMCO4Q9NRQ5 59 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 TAS2R10Q9NYW0 307 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 PISDQ9UG56 409 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 DNAH14Q0VDD8 3507 aa12.16□□□□□ -0.46
CLK3-206ENST00000562078 OR52A4PA6NMU1 304 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 PLRG1O43660 514 aaKnown RBP12.15□□□□□ -0.46
CLK3-206ENST00000562078 GNSP15586 552 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 CPT2P23786 658 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 HOXA6P31267 233 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 MPIP34949 423 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 SMIM11AP58511 58 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 REEP5Q00765 189 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 LRRC37A5PQ49AS3 106 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 UBE2NLQ5JXB2 153 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 UNQ6126/PRO20091Q6UXV3 157 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 OLIG3Q7RTU3 272 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 ADCK2Q7Z695 626 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 C15orf54Q8N8G6 183 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 SLC6A16Q9GZN6 736 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 MRPS30Q9NP92 439 aaKnown RBP12.15□□□□□ -0.46
CLK3-206ENST00000562078 TAAR2Q9P1P5 351 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 TRAPPC13A5PLN9 417 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 SURF4O15260 269 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 SLC31A1O15431 190 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 CEACAM5P06731 702 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 PRG2P13727 222 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 NME1P15531 152 aaKnown RBP12.15□□□□□ -0.46
CLK3-206ENST00000562078 TYRP1P17643 537 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 HTR1FP30939 366 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 TCEA2Q15560 299 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 ACBD7Q8N6N7 88 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 SOX7Q9BT81 388 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 PCBD2Q9H0N5 130 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 RHBGQ9H310 441 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 IL21RQ9HBE5 538 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 SLC2A4RGQ9NR83 387 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 CA14Q9ULX7 337 aa12.15□□□□□ -0.46
CLK3-206ENST00000562078 SCN2AQ99250 2005 aa12.14□□□□□ -0.47
CLK3-206ENST00000562078 TBC1D3DA0A087WVF3 549 aa12.14□□□□□ -0.47
CLK3-206ENST00000562078 TBC1D3IA0A087WXS9 549 aa12.14□□□□□ -0.47
CLK3-206ENST00000562078 TBC1D3EA0A087X179 549 aa12.14□□□□□ -0.47
CLK3-206ENST00000562078 TBC1D3KA0A087X1G2 549 aa12.14□□□□□ -0.47
CLK3-206ENST00000562078 TBC1D3FA6NER0 549 aaPredicted RBP12.14□□□□□ -0.47
CLK3-206ENST00000562078 A6NLC8 198 aa12.14□□□□□ -0.47
CLK3-206ENST00000562078 TBC1D3LB9A6J9 549 aa12.14□□□□□ -0.47
CLK3-206ENST00000562078 J3QRE1 110 aa12.14□□□□□ -0.47
CLK3-206ENST00000562078 OR1F1O43749 312 aa12.14□□□□□ -0.47
CLK3-206ENST00000562078 TBC1D3HP0C7X1 549 aa12.14□□□□□ -0.47
CLK3-206ENST00000562078 GKN3PP0CG01 181 aa12.14□□□□□ -0.47
CLK3-206ENST00000562078 UQCRC2P22695 453 aa12.14□□□□□ -0.47
CLK3-206ENST00000562078 TEAD1P28347 426 aa12.14□□□□□ -0.47
CLK3-206ENST00000562078 PCP4P48539 62 aa12.14□□□□□ -0.47
CLK3-206ENST00000562078 RBP2P50120 134 aa12.14□□□□□ -0.47
CLK3-206ENST00000562078 PPP2CBP62714 309 aa12.14□□□□□ -0.47
CLK3-206ENST00000562078 PPP2CAP67775 309 aa12.14□□□□□ -0.47
CLK3-206ENST00000562078 TBC1D3GQ6DHY5 549 aa12.14□□□□□ -0.47
CLK3-206ENST00000562078 TBC1D3CQ6IPX1 549 aa12.14□□□□□ -0.47
CLK3-206ENST00000562078 ZNF813Q6ZN06 617 aa12.14□□□□□ -0.47
CLK3-206ENST00000562078 CPOQ8IVL8 374 aa12.14□□□□□ -0.47
CLK3-206ENST00000562078 TBC1D3Q8IZP1 549 aaPredicted RBP12.14□□□□□ -0.47
CLK3-206ENST00000562078 PHYHIPLQ96FC7 376 aa12.14□□□□□ -0.47
CLK3-206ENST00000562078 CAMK1GQ96NX5 476 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms