RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 MESTQ5EB52 335 aa11.25□□□□□ -0.61
CMTM4-203ENST00000561680 ZNF362Q5T0B9 420 aaPredicted RBP11.25□□□□□ -0.61
CMTM4-203ENST00000561680 SLC35F1Q5T1Q4 408 aa11.25□□□□□ -0.61
CMTM4-203ENST00000561680 GTF2IRD2BQ6EKJ0 949 aa11.25□□□□□ -0.61
CMTM4-203ENST00000561680 CASP12Q6UXS9 341 aa11.25□□□□□ -0.61
CMTM4-203ENST00000561680 SEM1Q6ZVN7 128 aa11.25□□□□□ -0.61
CMTM4-203ENST00000561680 PTCHD4Q6ZW05 846 aa11.25□□□□□ -0.61
CMTM4-203ENST00000561680 ADCK1Q86TW2 530 aa11.25□□□□□ -0.61
CMTM4-203ENST00000561680 GTF2IRD2Q86UP8 949 aa11.25□□□□□ -0.61
CMTM4-203ENST00000561680 WDFY1Q8IWB7 410 aa11.25□□□□□ -0.61
CMTM4-203ENST00000561680 MCEMP1Q8IX19 187 aa11.25□□□□□ -0.61
CMTM4-203ENST00000561680 ARIH2OSQ8N7S6 290 aa11.25□□□□□ -0.61
CMTM4-203ENST00000561680 C9orf106Q8NAJ2 232 aa11.25□□□□□ -0.61
CMTM4-203ENST00000561680 OR6X1Q8NH79 312 aa11.25□□□□□ -0.61
CMTM4-203ENST00000561680 TMEM45BQ96B21 275 aa11.25□□□□□ -0.61
CMTM4-203ENST00000561680 GMPPAQ96IJ6 420 aaPredicted RBP11.25□□□□□ -0.61
CMTM4-203ENST00000561680 TXNDC15Q96J42 360 aa11.25□□□□□ -0.61
CMTM4-203ENST00000561680 ADAD1Q96M93 576 aaKnown RBP11.25□□□□□ -0.61
CMTM4-203ENST00000561680 TM9SF2Q99805 663 aa11.25□□□□□ -0.61
CMTM4-203ENST00000561680 APOL4Q9BPW4 351 aa11.25□□□□□ -0.61
CMTM4-203ENST00000561680 GLRX2Q9NS18 164 aa11.25□□□□□ -0.61
CMTM4-203ENST00000561680 TVP23BQ9NYZ1 205 aa11.25□□□□□ -0.61
CMTM4-203ENST00000561680 KLHL21Q9UJP4 597 aa11.25□□□□□ -0.61
CMTM4-203ENST00000561680 TINAGQ9UJW2 476 aa11.25□□□□□ -0.61
CMTM4-203ENST00000561680 RCE1Q9Y256 329 aa11.25□□□□□ -0.61
CMTM4-203ENST00000561680 SLC35F4A4IF30 521 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 RIIAD1A6NNX1 92 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 PRKYO43930 277 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 SS18L1O75177 396 aaPredicted RBP11.24□□□□□ -0.61
CMTM4-203ENST00000561680 ZNF432O94892 652 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 SLC2A10O95528 541 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 IFNGP01579 166 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 YES1P07947 543 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 ZNF3P17036 446 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 MYF6P23409 242 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 AGTR1P30556 359 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 TIMP3P35625 211 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 PCYT1AP49585 367 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 CLDN17P56750 224 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 EFNB1P98172 346 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 RUNX1T1Q06455 604 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.24□□□□□ -0.61
CMTM4-203ENST00000561680 SNAPC1Q16533 368 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 OR2A2Q6IF42 318 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 B3GNT6Q6ZMB0 384 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 TUSC5Q8IXB3 177 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 ENTHD1Q8IYW4 607 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 C8orf59Q8N0T1 100 aaPredicted RBP11.24□□□□□ -0.61
CMTM4-203ENST00000561680 TMEM123Q8N131 208 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 DEPDC4Q8N2C3 294 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 RPRMLQ8N4K4 120 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 SETD9Q8NE22 299 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 OR4K13Q8NH42 304 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 PLEKHA8Q96JA3 519 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 ZFP3Q96NJ6 502 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 MUS81Q96NY9 551 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 OR2M2Q96R28 347 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 SNX18Q96RF0 628 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 EMC6Q9BV81 110 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 FN3KQ9H479 309 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 Q9H521 79 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 IMPAD1Q9NX62 359 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 RNF6Q9Y252 685 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 HSPE1-MOB4S4R3N1 261 aa11.24□□□□□ -0.61
CMTM4-203ENST00000561680 HCFC1P51610 2035 aa11.23□□□□□ -0.61
CMTM4-203ENST00000561680 CENPBD1B2RD01 187 aa11.23□□□□□ -0.61
CMTM4-203ENST00000561680 XKRYO14609 159 aa11.23□□□□□ -0.61
CMTM4-203ENST00000561680 DENRO43583 198 aaKnown RBP11.23□□□□□ -0.61
CMTM4-203ENST00000561680 TRMUO75648 421 aaKnown RBP11.23□□□□□ -0.61
CMTM4-203ENST00000561680 IGHG1P01857 330 aa11.23□□□□□ -0.61
CMTM4-203ENST00000561680 PGA4P0DJD7 388 aa11.23□□□□□ -0.61
CMTM4-203ENST00000561680 PGA3P0DJD8 388 aa11.23□□□□□ -0.61
CMTM4-203ENST00000561680 ACADSP16219 412 aa11.23□□□□□ -0.61
CMTM4-203ENST00000561680 GABRB1P18505 474 aa11.23□□□□□ -0.61
CMTM4-203ENST00000561680 NTF4P34130 210 aa11.23□□□□□ -0.61
CMTM4-203ENST00000561680 CDKN2AP42771 156 aaKnown RBP11.23□□□□□ -0.61
CMTM4-203ENST00000561680 SNRPGP62308 76 aaKnown RBP11.23□□□□□ -0.61
CMTM4-203ENST00000561680 CRMP1Q14194 572 aa11.23□□□□□ -0.61
CMTM4-203ENST00000561680 EIF2S3LQ2VIR3 472 aaKnown RBP11.23□□□□□ -0.61
CMTM4-203ENST00000561680 LEG1Q6P5S2 330 aa11.23□□□□□ -0.61
CMTM4-203ENST00000561680 C3P1Q6ZMU1 363 aa11.23□□□□□ -0.61
CMTM4-203ENST00000561680 JAZF1Q86VZ6 243 aa11.23□□□□□ -0.61
CMTM4-203ENST00000561680 TCEANCQ8N8B7 351 aa11.23□□□□□ -0.61
CMTM4-203ENST00000561680 SLC37A3Q8NCC5 494 aa11.23□□□□□ -0.61
CMTM4-203ENST00000561680 NPEPL1Q8NDH3 523 aa11.23□□□□□ -0.61
CMTM4-203ENST00000561680 SDR9C7Q8NEX9 313 aa11.23□□□□□ -0.61
CMTM4-203ENST00000561680 NOXO1Q8NFA2 376 aa11.23□□□□□ -0.61
CMTM4-203ENST00000561680 OR52E2Q8NGJ4 325 aa11.23□□□□□ -0.61
CMTM4-203ENST00000561680 OR8J1Q8NGP2 316 aa11.23□□□□□ -0.61
CMTM4-203ENST00000561680 TMEM163Q8TC26 289 aa11.23□□□□□ -0.61
CMTM4-203ENST00000561680 TRUB1Q8WWH5 349 aaKnown RBP11.23□□□□□ -0.61
CMTM4-203ENST00000561680 HDAC2Q92769 488 aaKnown RBP11.23□□□□□ -0.61
CMTM4-203ENST00000561680 SLC25A44Q96H78 314 aaPredicted RBP11.23□□□□□ -0.61
CMTM4-203ENST00000561680 KCNK17Q96T54 332 aa11.23□□□□□ -0.61
CMTM4-203ENST00000561680 DDOQ99489 341 aa11.23□□□□□ -0.61
CMTM4-203ENST00000561680 TTYH2Q9BSA4 534 aa11.23□□□□□ -0.61
CMTM4-203ENST00000561680 ALG12Q9BV10 488 aa11.23□□□□□ -0.61
CMTM4-203ENST00000561680 MRPL13Q9BYD1 178 aaKnown RBP11.23□□□□□ -0.61
CMTM4-203ENST00000561680 HINT3Q9NQE9 182 aaKnown RBP11.23□□□□□ -0.61
CMTM4-203ENST00000561680 ZNF226Q9NYT6 803 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms