RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 HLA-HP01893 362 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 ADORA3P0DMS8 318 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 TROVE2P10155 538 aaKnown RBP eCLIP8.92□□□□□ -0.98
CLK3-205ENST00000561673 IFNGR1P15260 489 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 ARR3P36575 388 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 CAPZA2P47755 286 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 IDH3GP51553 393 aaPredicted RBP8.92□□□□□ -0.98
CLK3-205ENST00000561673 ARFIP2P53365 341 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 SNRPD2P62316 118 aaKnown RBP8.92□□□□□ -0.98
CLK3-205ENST00000561673 LOXL1Q08397 574 aaPredicted RBP8.92□□□□□ -0.98
CLK3-205ENST00000561673 NPRL3Q12980 569 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 KLF10Q13118 480 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 ZNF74Q16587 644 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 INTS11Q5TA45 600 aaKnown RBP8.92□□□□□ -0.98
CLK3-205ENST00000561673 CGB2Q6NT52 195 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 TTC33Q6PID6 262 aaPredicted RBP8.92□□□□□ -0.98
CLK3-205ENST00000561673 LRRC17Q8N6Y2 441 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 NUP37Q8NFH4 326 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 OR4F15Q8NGB8 312 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 OR8J3Q8NGG0 315 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 C10orf105Q8TEF2 133 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 SORCS2Q96PQ0 1159 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 TNFRSF13CQ96RJ3 184 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 SH3GL1Q99961 368 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 ECSITQ9BQ95 431 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 PCDHAC1Q9H158 963 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 PLK3Q9H4B4 646 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 B3GAT2Q9NPZ5 323 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 SAR1AQ9NR31 198 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 NANSQ9NR45 359 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 YAE1D1Q9NRH1 226 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 FGFR1OP2Q9NVK5 253 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 ZNF446Q9NWS9 450 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 TAS2R5Q9NYW4 299 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 USP22Q9UPT9 525 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 POFUT2Q9Y2G5 429 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 LOC100653049A0A140TA62 436 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 KPNA4O00629 521 aaPredicted RBP8.91□□□□□ -0.98
CLK3-205ENST00000561673 RNF13O43567 381 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 KRT34O76011 436 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 PDE5AO76074 875 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 OR6A2O95222 327 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 NPPAP01160 153 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 CD79AP11912 226 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 SLC25A16P16260 332 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 THBS4P35443 961 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 BIDP55957 195 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 PIGFQ07326 219 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 ZP4Q12836 540 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 EFNB3Q15768 340 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 TMEM249Q2WGJ8 235 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 MMEL1Q495T6 779 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 COQ5Q5HYK3 327 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 REP15Q6BDI9 236 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 ZNF813Q6ZN06 617 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 SLC35D2Q76EJ3 337 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 ZNF627Q7L945 461 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 SLC46A3Q7Z3Q1 461 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 ANKS4BQ8N8V4 417 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 IL17RDQ8NFM7 739 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 OR6N1Q8NGY5 312 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 OR6X1Q8NH79 312 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 RASSF5Q8WWW0 418 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 PROX1Q92786 737 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 MPP4Q96JB8 637 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 ZNF75AQ96N20 296 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 ZNF583Q96ND8 569 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 MDFIQ99750 246 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 VRK1Q99986 396 aaPredicted RBP8.91□□□□□ -0.98
CLK3-205ENST00000561673 PRSS27Q9BQR3 290 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 ZNF426Q9BUY5 554 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 ULBP2Q9BZM5 246 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 SLC19A3Q9BZV2 496 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 NOX3Q9HBY0 568 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 MEPEQ9NQ76 525 aaPredicted RBP8.91□□□□□ -0.98
CLK3-205ENST00000561673 MRGBPQ9NV56 204 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 ZNF224Q9NZL3 707 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 ZNF229Q9UJW7 825 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 SH3GLB1Q9Y371 365 aa8.91□□□□□ -0.98
CLK3-205ENST00000561673 HEATR1Q9H583 2144 aaKnown RBP8.9□□□□□ -0.98
CLK3-205ENST00000561673 TMEM129A0AVI4 362 aa8.9□□□□□ -0.98
CLK3-205ENST00000561673 BBIP1A8MTZ0 92 aa8.9□□□□□ -0.98
CLK3-205ENST00000561673 A8MV72 311 aaPredicted RBP8.9□□□□□ -0.98
CLK3-205ENST00000561673 hCG_2039718K7EN88 272 aa8.9□□□□□ -0.98
CLK3-205ENST00000561673 MRASO14807 208 aa8.9□□□□□ -0.98
CLK3-205ENST00000561673 SHOX2O60902 331 aaPredicted RBP8.9□□□□□ -0.98
CLK3-205ENST00000561673 HIST1H2ABP04908 130 aa8.9□□□□□ -0.98
CLK3-205ENST00000561673 VIMP08670 466 aaKnown RBP8.9□□□□□ -0.98
CLK3-205ENST00000561673 CSF3P09919 207 aa8.9□□□□□ -0.98
CLK3-205ENST00000561673 ASAH2BP0C7U1 165 aa8.9□□□□□ -0.98
CLK3-205ENST00000561673 B4GALT1P15291 398 aa8.9□□□□□ -0.98
CLK3-205ENST00000561673 TNFRSF1BP20333 461 aa8.9□□□□□ -0.98
CLK3-205ENST00000561673 NPR2P20594 1047 aa8.9□□□□□ -0.98
CLK3-205ENST00000561673 CSNK1A1P48729 337 aa8.9□□□□□ -0.98
CLK3-205ENST00000561673 VLDLRP98155 873 aa8.9□□□□□ -0.98
CLK3-205ENST00000561673 DAG1Q14118 895 aa8.9□□□□□ -0.98
CLK3-205ENST00000561673 GSG1Q2KHT4 349 aa8.9□□□□□ -0.98
CLK3-205ENST00000561673 KRT80Q6KB66 452 aa8.9□□□□□ -0.98
CLK3-205ENST00000561673 LRFN4Q6PJG9 635 aa8.9□□□□□ -0.98
CLK3-205ENST00000561673 HIST3H2AQ7L7L0 130 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms