RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 MYF6P23409 242 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 IMPA1P29218 277 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 IL12AP29459 219 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 TIA1P31483 386 aaKnown RBP eCLIP2.83□□□□□ -1.96
SPG11-225ENST00000561391 CEACAM8P31997 349 aaPredicted RBP2.83□□□□□ -1.96
SPG11-225ENST00000561391 KDELR2P33947 212 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 CAPGP40121 348 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 NR4A2P43354 598 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 GABRA4P48169 554 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 CYB561P49447 251 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 HTR6P50406 440 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 ALDH3A2P51648 485 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 ZNF136P52737 540 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 P2RX3P56373 397 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 SMIM11AP58511 58 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 HMGCS1Q01581 520 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 RELAQ04206 551 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 LGALS3BPQ08380 585 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 LOXL1Q08397 574 aaPredicted RBP2.83□□□□□ -1.96
SPG11-225ENST00000561391 ZNF763Q0D2J5 394 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 ITGADQ13349 1161 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 C18orf21Q32NC0 220 aaPredicted RBP2.83□□□□□ -1.96
SPG11-225ENST00000561391 ZNF260Q3ZCT1 412 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 ZNF658BQ4V348 819 aaPredicted RBP2.83□□□□□ -1.96
SPG11-225ENST00000561391 FBXO48Q5FWF7 155 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 RBM48Q5RL73 367 aaKnown RBP2.83□□□□□ -1.96
SPG11-225ENST00000561391 CCNYL2Q5T2Q4 361 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 DCAF12L2Q5VW00 463 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 H3F3CQ6NXT2 135 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 FAM180BQ6P0A1 224 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 TTC33Q6PID6 262 aaPredicted RBP2.83□□□□□ -1.96
SPG11-225ENST00000561391 DNM1P46Q6ZS02 220 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 ZNF621Q6ZSS3 439 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 EIF3MQ7L2H7 374 aaKnown RBP2.83□□□□□ -1.96
SPG11-225ENST00000561391 PIWIL3Q7Z3Z3 882 aaKnown RBP2.83□□□□□ -1.96
SPG11-225ENST00000561391 PATL1Q86TB9 770 aaKnown RBP2.83□□□□□ -1.96
SPG11-225ENST00000561391 TBC1D26Q86UD7 250 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 C17orf64Q86WR6 236 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 CARM1Q86X55 608 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 ZNF547Q8IVP9 402 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 CLEC4FQ8N1N0 589 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 METTL4Q8N3J2 472 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 ZCCHC7Q8N3Z6 543 aaKnown RBP2.83□□□□□ -1.96
SPG11-225ENST00000561391 CBR4Q8N4T8 237 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 ZNF441Q8N8Z8 693 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 C11orf65Q8NCR3 313 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 TSPAN14Q8NG11 270 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 OR4K1Q8NGD4 311 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 OR10A6Q8NH74 314 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 OR5K1Q8NHB7 308 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 OR5K2Q8NHB8 316 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 HUS1BQ8NHY5 278 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 NFKBIDQ8NI38 313 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 MRAPQ8TCY5 172 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 LKAAEAR1Q8TD35 194 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 ADAMTS16Q8TE57 1224 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 RASSF5Q8WWW0 418 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 LCN9Q8WX39 176 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 OR5P2Q8WZ92 322 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 FIG4Q92562 907 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 HDAC2Q92769 488 aaKnown RBP2.83□□□□□ -1.96
SPG11-225ENST00000561391 TMEM18Q96B42 140 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 PYCR2Q96C36 320 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 PPCDCQ96CD2 204 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 TEX37Q96LM6 180 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 CNBD2Q96M20 576 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 C12orf66Q96MD2 445 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 BBS4Q96RK4 519 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 APOL4Q9BPW4 351 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 TUBA1CQ9BQE3 449 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 SLC39A3Q9BRY0 314 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 FAIM2Q9BWQ8 316 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 ROGDIQ9GZN7 287 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 XKR8Q9H6D3 395 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 TMEM38AQ9H6F2 299 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 METTL17Q9H7H0 456 aaPredicted RBP2.83□□□□□ -1.96
SPG11-225ENST00000561391 MYNNQ9NPC7 610 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 IL1RAPQ9NPH3 570 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 MIEF1Q9NQG6 463 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 CUTCQ9NTM9 273 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 C20orf141Q9NUB4 165 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 ZNF226Q9NYT6 803 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 TAS2R10Q9NYW0 307 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 TAS2R7Q9NYW3 318 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 USE1Q9NZ43 259 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 OR6C2Q9NZP2 312 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 VAPAQ9P0L0 249 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 HSPB7Q9UBY9 170 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 PSME2Q9UL46 239 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 PLCL2Q9UPR0 1127 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 LIPT1Q9Y234 373 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 ASF1AQ9Y294 204 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 A0A1W2PRB8 838 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 TRBC2A0A5B9 178 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 PINLYPA6NC86 204 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 GAGE12JA6NER3 117 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 URADA6NGE7 173 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 C2orf74A8MZ97 194 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 IFNL4K9M1U5 179 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms