RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 POU6F2P78424 691 aaPredicted RBP4.42□□□□□ -1.7
HERC1-213ENST00000561359 H3F3AP84243 136 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 ROR2Q01974 943 aaKnown RBP4.42□□□□□ -1.7
HERC1-213ENST00000561359 EMX1Q04741 257 aaPredicted RBP4.42□□□□□ -1.7
HERC1-213ENST00000561359 ACSM2AQ08AH3 577 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 C2orf80Q0P641 193 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 ILF2Q12905 390 aaKnown RBP4.42□□□□□ -1.7
HERC1-213ENST00000561359 HSPB3Q12988 150 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 DCTN2Q13561 401 aaKnown RBP4.42□□□□□ -1.7
HERC1-213ENST00000561359 ICAM4Q14773 271 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 DUSP5Q16690 384 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 TTMPQ5BVD1 217 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.42□□□□□ -1.7
HERC1-213ENST00000561359 PRAMEF8Q5VWM4 474 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 PRAMEF7Q5VXH5 474 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 STEAP4Q687X5 459 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 ACSM2BQ68CK6 577 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 RGS7BPQ6MZT1 257 aaPredicted RBP4.42□□□□□ -1.7
HERC1-213ENST00000561359 CDC73Q6P1J9 531 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 RAPH1Q70E73 1250 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 LINGO2Q7L985 606 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 ZNF551Q7Z340 670 aaPredicted RBP4.42□□□□□ -1.7
HERC1-213ENST00000561359 CMIPQ8IY22 773 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 CCDC36Q8IYA8 594 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 GALNT4Q8N4A0 578 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 ZIC4Q8N9L1 334 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 CPEB3Q8NE35 698 aaKnown RBP4.42□□□□□ -1.7
HERC1-213ENST00000561359 OR4F17Q8NGA8 305 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 ADAMTS15Q8TE58 950 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 CFHR4Q92496 578 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 MAGOHBQ96A72 148 aaKnown RBP4.42□□□□□ -1.7
HERC1-213ENST00000561359 NEURL3Q96EH8 262 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 AJUBAQ96IF1 538 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 TSPAN32Q96QS1 320 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 OR4F4Q96R69 305 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 DCLRE1CQ96SD1 692 aaKnown RBP4.42□□□□□ -1.7
HERC1-213ENST00000561359 SSBP3Q9BWW4 388 aaPredicted RBP4.42□□□□□ -1.7
HERC1-213ENST00000561359 BTBD2Q9BX70 525 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 EBPLQ9BY08 206 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 HOXD1Q9GZZ0 328 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 MMP28Q9H239 520 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 TMPRSS5Q9H3S3 457 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 NANOGQ9H9S0 305 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 BRF2Q9HAW0 419 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 PATZ1Q9HBE1 687 aaKnown RBP4.42□□□□□ -1.7
HERC1-213ENST00000561359 MIEF1Q9NQG6 463 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 CTPS2Q9NRF8 586 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 ACER3Q9NUN7 267 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 NSMCE4AQ9NXX6 385 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 SLCO1C1Q9NYB5 712 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 GRHL1Q9NZI5 618 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 KIF17Q9P2E2 1029 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 CPSF2Q9P2I0 782 aaKnown RBP4.42□□□□□ -1.7
HERC1-213ENST00000561359 TXNDC16Q9P2K2 825 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.42□□□□□ -1.7
HERC1-213ENST00000561359 SNX6Q9UNH7 406 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 TRAPPC4Q9Y296 219 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 TNPO3Q9Y5L0 923 aaKnown RBP4.42□□□□□ -1.7
HERC1-213ENST00000561359 NPTNQ9Y639 398 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 DNAH7Q8WXX0 4024 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 DSPPQ9NZW4 1301 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 CSMD3Q7Z407 3707 aa4.42□□□□□ -1.7
HERC1-213ENST00000561359 BTBD17A6NE02 478 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 ANKRD61A6NGH8 418 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 A8MXK9 166 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 H0YHG0 523 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 ANKRD28O15084 1053 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 SPRY3O43610 288 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 UPK3AO75631 287 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 IGHV2-70P01814 119 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 HLA-HP01893 362 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 AMY2AP04746 511 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 ANXA4P09525 319 aaPredicted RBP4.41□□□□□ -1.7
HERC1-213ENST00000561359 UBTFL6P0CB48 400 aaPredicted RBP4.41□□□□□ -1.7
HERC1-213ENST00000561359 OR8G3PP0DMU2 310 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 OR12D1P0DN82 309 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 AMY2BP19961 511 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 DRD4P21917 467 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 UQCRC2P22695 453 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 LMO1P25800 156 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 FKBP2P26885 142 aaKnown RBP4.41□□□□□ -1.7
HERC1-213ENST00000561359 TGFBR2P37173 567 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 FNTAP49354 379 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 CLK1P49759 484 aaKnown RBP4.41□□□□□ -1.7
HERC1-213ENST00000561359 ATP12AP54707 1039 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 RAE1P78406 368 aaKnown RBP4.41□□□□□ -1.7
HERC1-213ENST00000561359 GLO1Q04760 184 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 PIGFQ07326 219 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 DLG1Q12959 904 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 TRAF3Q13114 568 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 PDE7AQ13946 482 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 MOGQ16653 247 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 ZSCAN26Q16670 478 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 GSG1Q2KHT4 349 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 TTC27Q6P3X3 843 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 NIPAL3Q6P499 406 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 C6orf89Q6UWU4 347 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 FRRS1Q6ZNA5 592 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 C10orf67Q8IYJ2 551 aa4.41□□□□□ -1.7
HERC1-213ENST00000561359 PDIK1LQ8N165 341 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms