RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 TIMM22Q9Y584 194 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 DNAH9Q9NYC9 4486 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 PLSCR5A0PG75 271 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 LIPT2A6NK58 231 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 SPRY3O43610 288 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 CRCPO75575 148 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 UBL3O95164 117 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 GSTA1P08263 222 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 H2AFXP16104 143 aaPredicted RBP8.02□□□□□ -1.13
HERC1-210ENST00000560897 ZNF43P17038 809 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 EFNA1P20827 205 aaPredicted RBP8.02□□□□□ -1.13
HERC1-210ENST00000560897 MAPK1P28482 360 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 GTF2E2P29084 291 aaKnown RBP8.02□□□□□ -1.13
HERC1-210ENST00000560897 PGM1P36871 562 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 SLC6A9P48067 706 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 GIPRP48546 466 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 CLDN17P56750 224 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 SEC61A1P61619 476 aaKnown RBP8.02□□□□□ -1.13
HERC1-210ENST00000560897 GLO1Q04760 184 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 RBBP4Q09028 425 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 ZNF385BQ569K4 471 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 FOXB2Q5VYV0 432 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 Q6ZSV7 163 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 LCA5Q86VQ0 697 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 PIK3C3Q8NEB9 887 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 LRTOMTQ8WZ04 291 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 ZBTB9Q96C00 473 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 EGLN2Q96KS0 407 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 OR7D2Q96RA2 312 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 SDF2Q99470 211 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 MRPL57Q9BQC6 102 aaKnown RBP8.02□□□□□ -1.13
HERC1-210ENST00000560897 TMEM109Q9BVC6 243 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 C1QTNF3Q9BXJ4 246 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 OR51B6Q9H340 312 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 NKIRAS1Q9NYS0 192 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 OSGIN1Q9UJX0 560 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 MKLN1Q9UL63 735 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 TRIM33Q9UPN9 1127 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 RCE1Q9Y256 329 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 LRCH1Q9Y2L9 728 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 KCNE3Q9Y6H6 103 aa8.02□□□□□ -1.13
HERC1-210ENST00000560897 DYNC2H1Q8NCM8 4307 aaKnown RBP8.01□□□□□ -1.13
HERC1-210ENST00000560897 TANC2Q9HCD6 1990 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 IGLV3-9A0A075B6K5 115 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 ZC3H12DA2A288 527 aaKnown RBP8.01□□□□□ -1.13
HERC1-210ENST00000560897 SERTM1A2A2V5 107 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 BTBD17A6NE02 478 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 DUXAA6NLW8 204 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 A8MT66 165 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 K7EIL1 84 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 ATP8B1O43520 1251 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 GLRA3O75311 464 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 UGT2B17O75795 530 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 UBOX5O94941 541 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 IGHV2-70P01814 119 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 OR12D1P0DN82 309 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 ZNF250P15622 560 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 UQCRC2P22695 453 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 CXCR1P25024 350 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 TACR3P29371 465 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 FRKP42685 505 aaPredicted RBP8.01□□□□□ -1.13
HERC1-210ENST00000560897 CCT3P49368 545 aaKnown RBP8.01□□□□□ -1.13
HERC1-210ENST00000560897 PKNOX1P55347 436 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 PRSS12P56730 875 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 RAB1AP62820 205 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 C1DQ13901 141 aaKnown RBP8.01□□□□□ -1.13
HERC1-210ENST00000560897 CCDC153Q494R4 210 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 TMEM155Q4W5P6 130 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 ZNF813Q6ZN06 617 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 VASH1Q7L8A9 365 aaPredicted RBP8.01□□□□□ -1.13
HERC1-210ENST00000560897 C16orf62Q7Z3J2 963 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 SNX32Q86XE0 403 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 EPHX4Q8IUS5 362 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 C4orf33Q8N1A6 199 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 GALNT4Q8N4A0 578 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 ZSCAN4Q8NAM6 433 aaPredicted RBP8.01□□□□□ -1.13
HERC1-210ENST00000560897 FAM71CQ8NEG0 241 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 OR5D16Q8NGK9 328 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 ZNF519Q8TB69 540 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 MOAP1Q96BY2 351 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 KCNA7Q96RP8 456 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 PAIP2Q9BPZ3 127 aaKnown RBP8.01□□□□□ -1.13
HERC1-210ENST00000560897 SSBP3Q9BWW4 388 aaPredicted RBP8.01□□□□□ -1.13
HERC1-210ENST00000560897 MRPL46Q9H2W6 279 aaKnown RBP8.01□□□□□ -1.13
HERC1-210ENST00000560897 C16orf95Q9H693 158 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 CDH20Q9HBT6 801 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 B3GAT2Q9NPZ5 323 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 EXOSC3Q9NQT5 275 aaKnown RBP8.01□□□□□ -1.13
HERC1-210ENST00000560897 B3GNT2Q9NY97 397 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 POFUT2Q9Y2G5 429 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 GPR45Q9Y5Y3 372 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 SACSQ9NZJ4 4579 aa8.01□□□□□ -1.13
HERC1-210ENST00000560897 NUP214P35658 2090 aaPredicted RBP8□□□□□ -1.13
HERC1-210ENST00000560897 IGHV2-70DA0A0C4DH43 119 aa8□□□□□ -1.13
HERC1-210ENST00000560897 CENPVL1A0A0U1RR11 272 aa8□□□□□ -1.13
HERC1-210ENST00000560897 A0A1W2PPM1 405 aa8□□□□□ -1.13
HERC1-210ENST00000560897 M0R3G1 203 aa8□□□□□ -1.13
HERC1-210ENST00000560897 TBX19O60806 448 aa8□□□□□ -1.13
HERC1-210ENST00000560897 SEC22BO75396 215 aa8□□□□□ -1.13
HERC1-210ENST00000560897 UROSP10746 265 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms