RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 CASP7P55210 303 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 MLF1P58340 268 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 VEZF1Q14119 521 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 KDM4DQ6B0I6 523 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 MFSD12Q6NUT3 480 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 CDH26Q8IXH8 852 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 KLHDC8BQ8IXV7 354 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 CMTM3Q96MX0 182 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 FGFBP2Q9BYJ0 223 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 INSL5Q9Y5Q6 135 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 C5AR1P21730 350 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 ZNF845Q96IR2 970 aaPredicted RBP12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 DCAF13Q9NV06 445 aaKnown RBP12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 PLRG1O43660 514 aaKnown RBP12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 RD3LP0DJH9 198 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 CDKN2DP55273 166 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 ILKQ13418 452 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 FRMPD2BQ6IN97 320 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 EIF4E3Q8N5X7 224 aaKnown RBP12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 OR51A2Q8NGJ7 313 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 WDR61Q9GZS3 305 aaKnown RBP12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 OBP2AQ9NY56 170 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 ZNF593O00488 134 aaPredicted RBP12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 GATCO43716 136 aaKnown RBP12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 ZNF217O75362 1048 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 EDDM3BP56851 147 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 OR1Q1Q15612 314 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 PGGHGQ32M88 737 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 Q6ZVL8 140 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 TUSC5Q8IXB3 177 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 DUOX1Q9NRD9 1551 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 A0A0J9YY10 115 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 ZNF320A2RRD8 509 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 TYROBPO43914 113 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 CSNK1G2P78368 415 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 LY6G5CQ5SRR4 150 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 PPP1R3BQ86XI6 285 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 PNPLA1Q8N8W4 532 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 OR2AE1Q8NHA4 323 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 ABCC6O95255 1503 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 CLDN24A6NM45 220 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 RPS19P39019 145 aaKnown RBP12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 B3GNTL1Q67FW5 361 aaPredicted RBP12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 HBMQ6B0K9 141 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 EID2Q8N6I1 236 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 SLC25A32Q9H2D1 315 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 C8orf33Q9H7E9 229 aaPredicted RBP12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 SELEP16581 610 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 FAM182AQ5T1J6 154 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 B3GNT8Q7Z7M8 397 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 LYSMD1Q96S90 227 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 FAAP24Q9BTP7 215 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 NOSIPQ9Y314 301 aaKnown RBP12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 GABRR3A8MPY1 467 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 H3BVH4 76 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 IGHEP01854 428 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 GYPBP06028 91 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 SOX18P35713 384 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 OPRD1P41143 372 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 PPP1CBP62140 327 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 DSC1Q08554 894 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 OXA1LQ15070 435 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 OR4D1Q15615 310 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 TOR2AQ5JU69 321 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 C6orf132Q5T0Z8 1188 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 LRRC56Q8IYG6 542 aaPredicted RBP12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 GPR32P1Q8NGA4 272 aa12.87□□□□□ -0.35
CSPG4P12-202ENST00000559989 OR7C2O60412 319 aa12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 IL1RNP18510 177 aa12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 RETREG3Q86VR2 466 aa12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 HSD17B11Q8NBQ5 300 aa12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 PTRH2Q9Y3E5 179 aaKnown RBP12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 DEDDO75618 318 aa12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 YIF1AO95070 293 aa12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 S100A4P26447 101 aaKnown RBP12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 OR7E24Q6IFN5 339 aa12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 TMEM135Q86UB9 458 aa12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 OR10AD1Q8NGE0 317 aa12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 WDR76Q9H967 626 aa12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 ARNTP27540 789 aa12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 APEX1P27695 318 aaKnown RBP12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 WDR88Q6ZMY6 472 aa12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 USP53Q70EK8 1073 aa12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 AKR7LQ8NHP1 331 aa12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 ZNF300Q96RE9 604 aaPredicted RBP12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 AMBRA1Q9C0C7 1298 aa12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 A0A1W2PQU0 124 aa12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 SOWAHBA6NEL2 793 aa12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 ICAM2P13598 275 aa12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 NKX2-1P43699 371 aaPredicted RBP12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 HIST1H3AP68431 136 aa12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 ELAVL3Q14576 367 aaKnown RBP12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 NCR3LG1Q68D85 454 aa12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 C5orf46Q6UWT4 87 aa12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 BTNL3Q6UXE8 466 aa12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 OR52B6Q8NGF0 335 aa12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 DVL3Q92997 716 aaPredicted RBP12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 NKX2-4Q9H2Z4 354 aa12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 SPHK2Q9NRA0 654 aa12.86□□□□□ -0.35
CSPG4P12-202ENST00000559989 TEKQ02763 1124 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms