RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 RIBC2Q9H4K1 309 aa12.73□□□□□ -0.37
SMAD6-204ENST00000559931 FANCFQ9NPI8 374 aa12.73□□□□□ -0.37
SMAD6-204ENST00000559931 ZNF629Q9UEG4 869 aaPredicted RBP12.73□□□□□ -0.37
SMAD6-204ENST00000559931 ZNF346Q9UL40 294 aaKnown RBP12.73□□□□□ -0.37
SMAD6-204ENST00000559931 ADAM18Q9Y3Q7 739 aa12.73□□□□□ -0.37
SMAD6-204ENST00000559931 FREM1Q5H8C1 2179 aa12.72□□□□□ -0.37
SMAD6-204ENST00000559931 XKRYO14609 159 aa12.72□□□□□ -0.37
SMAD6-204ENST00000559931 SLC43A1O75387 559 aa12.72□□□□□ -0.37
SMAD6-204ENST00000559931 IL18BPO95998 194 aa12.72□□□□□ -0.37
SMAD6-204ENST00000559931 ALPLP05186 524 aa12.72□□□□□ -0.37
SMAD6-204ENST00000559931 SELENOPP49908 381 aa12.72□□□□□ -0.37
SMAD6-204ENST00000559931 CRISP1P54107 249 aa12.72□□□□□ -0.37
SMAD6-204ENST00000559931 CLRN1P58418 232 aa12.72□□□□□ -0.37
SMAD6-204ENST00000559931 FXYD6P3P58550 94 aa12.72□□□□□ -0.37
SMAD6-204ENST00000559931 ADORA2A-AS1P86434 159 aa12.72□□□□□ -0.37
SMAD6-204ENST00000559931 CAMK2DQ13557 499 aa12.72□□□□□ -0.37
SMAD6-204ENST00000559931 GINS1Q14691 196 aa12.72□□□□□ -0.37
SMAD6-204ENST00000559931 ZIK1Q3SY52 487 aaPredicted RBP12.72□□□□□ -0.37
SMAD6-204ENST00000559931 GPR139Q6DWJ6 353 aa12.72□□□□□ -0.37
SMAD6-204ENST00000559931 HDDC2Q7Z4H3 204 aa12.72□□□□□ -0.37
SMAD6-204ENST00000559931 OR6N1Q8NGY5 312 aa12.72□□□□□ -0.37
SMAD6-204ENST00000559931 ASB5Q8WWX0 329 aa12.72□□□□□ -0.37
SMAD6-204ENST00000559931 TMEM45BQ96B21 275 aa12.72□□□□□ -0.37
SMAD6-204ENST00000559931 STARD4Q96DR4 205 aa12.72□□□□□ -0.37
SMAD6-204ENST00000559931 Q96M85 177 aa12.72□□□□□ -0.37
SMAD6-204ENST00000559931 ADAD1Q96M93 576 aaKnown RBP12.72□□□□□ -0.37
SMAD6-204ENST00000559931 ZNF570Q96NI8 536 aa12.72□□□□□ -0.37
SMAD6-204ENST00000559931 PLA2G12AQ9BZM1 189 aa12.72□□□□□ -0.37
SMAD6-204ENST00000559931 VCXQ9H320 206 aa12.72□□□□□ -0.37
SMAD6-204ENST00000559931 NRIP3Q9NQ35 241 aa12.72□□□□□ -0.37
SMAD6-204ENST00000559931 USE1Q9NZ43 259 aa12.72□□□□□ -0.37
SMAD6-204ENST00000559931 UPB1Q9UBR1 384 aa12.72□□□□□ -0.37
SMAD6-204ENST00000559931 TMEFF2Q9UIK5 374 aaPredicted RBP12.72□□□□□ -0.37
SMAD6-204ENST00000559931 A6NIZ1 184 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 EEF1E1-BLOC1S5C9J1V9 151 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 CASQ2O14958 399 aaPredicted RBP12.71□□□□□ -0.37
SMAD6-204ENST00000559931 ARHGEF9O43307 516 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 EEF1E1O43324 174 aaKnown RBP12.71□□□□□ -0.37
SMAD6-204ENST00000559931 IDH3BO43837 385 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 TNFSF13O75888 250 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 AGFG2O95081 481 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 IGHV3-9P01782 118 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 TP53P04637 393 aaPredicted RBP12.71□□□□□ -0.37
SMAD6-204ENST00000559931 CHRNB4P30926 498 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 NTF4P34130 210 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 GIPRP48546 466 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 RAP1BP61224 184 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 ESRRGP62508 458 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 RAP1AP62834 184 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 MYBPC1Q00872 1141 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 GUSBP1Q15486 140 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 SLC35F1Q5T1Q4 408 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 SLC27A4Q6P1M0 643 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 MRGPRGQ86SM5 289 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 PARP8Q8N3A8 854 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 GPR137CQ8N3F9 429 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 IQCF1Q8N6M8 205 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 ARIH2OSQ8N7S6 290 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 ZNF610Q8N9Z0 462 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 SYT14Q8NB59 555 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 OR2T33Q8NG76 320 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 OR8D4Q8NGM9 314 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 OR6X1Q8NH79 312 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 CA5BP1Q8WTZ4 195 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 ASB10Q8WXI3 467 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 ZNF566Q969W8 418 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 SLC25A44Q96H78 314 aaPredicted RBP12.71□□□□□ -0.37
SMAD6-204ENST00000559931 TSPAN32Q96QS1 320 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 OR2M2Q96R28 347 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 OPN3Q9H1Y3 402 aaPredicted RBP12.71□□□□□ -0.37
SMAD6-204ENST00000559931 VCX3BQ9H321 246 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 PIGMQ9H3S5 423 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 C8orf4Q9NR00 106 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 PLSCR4Q9NRQ2 329 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 BAIAP2Q9UQB8 552 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 RCE1Q9Y256 329 aa12.71□□□□□ -0.37
SMAD6-204ENST00000559931 DOPEY2Q9Y3R5 2298 aa12.71□□□□□ -0.38
SMAD6-204ENST00000559931 SPTBN1Q01082 2364 aaKnown RBP12.7□□□□□ -0.38
SMAD6-204ENST00000559931 TEX13CA0A0J9YWL9 993 aa12.7□□□□□ -0.38
SMAD6-204ENST00000559931 M0R3G1 203 aa12.7□□□□□ -0.38
SMAD6-204ENST00000559931 ZG16O60844 167 aa12.7□□□□□ -0.38
SMAD6-204ENST00000559931 IGHG1P01857 330 aa12.7□□□□□ -0.38
SMAD6-204ENST00000559931 ACADSP16219 412 aa12.7□□□□□ -0.38
SMAD6-204ENST00000559931 SDHAP31040 664 aa12.7□□□□□ -0.38
SMAD6-204ENST00000559931 OR3A2P47893 321 aa12.7□□□□□ -0.38
SMAD6-204ENST00000559931 CSNK1A1P48729 337 aa12.7□□□□□ -0.38
SMAD6-204ENST00000559931 NPRL3Q12980 569 aa12.7□□□□□ -0.38
SMAD6-204ENST00000559931 PTGES3Q15185 160 aaKnown RBP12.7□□□□□ -0.38
SMAD6-204ENST00000559931 ARMC4Q5T2S8 1044 aa12.7□□□□□ -0.38
SMAD6-204ENST00000559931 OGFRL1Q5TC84 451 aaPredicted RBP12.7□□□□□ -0.38
SMAD6-204ENST00000559931 TMEM236Q5W0B7 351 aa12.7□□□□□ -0.38
SMAD6-204ENST00000559931 FBXW10Q5XX13 1052 aa12.7□□□□□ -0.38
SMAD6-204ENST00000559931 FAM205BPQ63HN1 556 aa12.7□□□□□ -0.38
SMAD6-204ENST00000559931 NHLRC1Q6VVB1 395 aa12.7□□□□□ -0.38
SMAD6-204ENST00000559931 LUZP2Q86TE4 346 aa12.7□□□□□ -0.38
SMAD6-204ENST00000559931 JAZF1Q86VZ6 243 aa12.7□□□□□ -0.38
SMAD6-204ENST00000559931 LIX1LQ8IVB5 337 aa12.7□□□□□ -0.38
SMAD6-204ENST00000559931 PACRGLQ8N7B6 248 aa12.7□□□□□ -0.38
SMAD6-204ENST00000559931 OR4K13Q8NH42 304 aa12.7□□□□□ -0.38
SMAD6-204ENST00000559931 RASD2Q96D21 266 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms