RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 UBL3O95164 117 aa10.62□□□□□ -0.71
SPG11-219ENST00000559822 RAB36O95755 333 aa10.62□□□□□ -0.71
SPG11-219ENST00000559822 ADORA3P0DMS8 318 aa10.62□□□□□ -0.71
SPG11-219ENST00000559822 CD79AP11912 226 aa10.62□□□□□ -0.71
SPG11-219ENST00000559822 HLA-DOBP13765 273 aa10.62□□□□□ -0.71
SPG11-219ENST00000559822 LSP1P33241 339 aa10.62□□□□□ -0.71
SPG11-219ENST00000559822 THBS4P35443 961 aa10.62□□□□□ -0.71
SPG11-219ENST00000559822 CSNK1A1P48729 337 aa10.62□□□□□ -0.71
SPG11-219ENST00000559822 PCBP3P57721 371 aaKnown RBP10.62□□□□□ -0.71
SPG11-219ENST00000559822 RPS23P62266 143 aaKnown RBP10.62□□□□□ -0.71
SPG11-219ENST00000559822 HGFACQ04756 655 aa10.62□□□□□ -0.71
SPG11-219ENST00000559822 SNTB2Q13425 540 aaKnown RBP10.62□□□□□ -0.71
SPG11-219ENST00000559822 TRMT5Q32P41 509 aaKnown RBP10.62□□□□□ -0.71
SPG11-219ENST00000559822 TTMPQ5BVD1 217 aa10.62□□□□□ -0.71
SPG11-219ENST00000559822 PTOV1Q86YD1 416 aa10.62□□□□□ -0.71
SPG11-219ENST00000559822 SLC26A7Q8TE54 656 aa10.62□□□□□ -0.71
SPG11-219ENST00000559822 ZNF837Q96EG3 531 aaPredicted RBP10.62□□□□□ -0.71
SPG11-219ENST00000559822 MPP4Q96JB8 637 aa10.62□□□□□ -0.71
SPG11-219ENST00000559822 FOXN4Q96NZ1 517 aa10.62□□□□□ -0.71
SPG11-219ENST00000559822 MOGAT1Q96PD6 335 aa10.62□□□□□ -0.71
SPG11-219ENST00000559822 ARHGDIGQ99819 225 aa10.62□□□□□ -0.71
SPG11-219ENST00000559822 EMC6Q9BV81 110 aa10.62□□□□□ -0.71
SPG11-219ENST00000559822 REPIN1Q9BWE0 567 aaKnown RBP10.62□□□□□ -0.71
SPG11-219ENST00000559822 NOX3Q9HBY0 568 aa10.62□□□□□ -0.71
SPG11-219ENST00000559822 MRGBPQ9NV56 204 aa10.62□□□□□ -0.71
SPG11-219ENST00000559822 MED29Q9NX70 200 aa10.62□□□□□ -0.71
SPG11-219ENST00000559822 CMAHPQ9Y471 501 aa10.62□□□□□ -0.71
SPG11-219ENST00000559822 YLPM1P49750 1951 aaKnown RBP10.61□□□□□ -0.71
SPG11-219ENST00000559822 MXRA5Q9NR99 2828 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 ZNF503-AS2A6NEH8 195 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 M0R3H8 397 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 TPST2O60704 377 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 SERPINI2O75830 405 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 HLA-HP01893 362 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 DAOP14920 347 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 ZNF23P17027 643 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 GIFP27352 417 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 PCGF2P35227 344 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 THBS2P35442 1172 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 EVX1P49640 407 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 CHN2P52757 468 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 MTPNP58546 118 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 GALK2Q01415 458 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 CAMK2DQ13557 499 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 NFYCQ13952 458 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 DUSP7Q16829 419 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 ENTPD8Q5MY95 495 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 PHYHD1Q5SRE7 291 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 KRT80Q6KB66 452 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 TTC33Q6PID6 262 aaPredicted RBP10.61□□□□□ -0.71
SPG11-219ENST00000559822 LINC00114Q6XXX2 140 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 MYPOPQ86VE0 399 aaPredicted RBP10.61□□□□□ -0.71
SPG11-219ENST00000559822 SVOPLQ8N434 492 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 ADAMTS16Q8TE57 1224 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 CKAP2Q8WWK9 683 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 TXNDC15Q96J42 360 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 DOK1Q99704 481 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 FOXB1Q99853 325 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 SLC19A3Q9BZV2 496 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 BPESC1Q9GZL8 116 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 KAT8Q9H7Z6 458 aaKnown RBP10.61□□□□□ -0.71
SPG11-219ENST00000559822 NANSQ9NR45 359 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 B3GNT2Q9NY97 397 aa10.61□□□□□ -0.71
SPG11-219ENST00000559822 DNHD1Q96M86 4753 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 IGHV4-61A0A0C4DH41 118 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 TRAPPC13A5PLN9 417 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 CPSF4LA6NMK7 179 aaKnown RBP10.6□□□□□ -0.71
SPG11-219ENST00000559822 LRRN3E7EW58 273 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 C11orf98E9PRG8 122 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 M0R233 179 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 PHF1O43189 567 aaPredicted RBP10.6□□□□□ -0.71
SPG11-219ENST00000559822 RNF13O43567 381 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 SYNGR3O43761 229 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 STAMBPO95630 424 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 OPN1SWP03999 348 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 HIST1H2ABP04908 130 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 IFNGR1P15260 489 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 B4GALT1P15291 398 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 SRD5A1P18405 259 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 CD247P20963 164 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 NR4A1P22736 598 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 GLRXP35754 106 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 PTDSS1P48651 473 aaKnown RBP10.6□□□□□ -0.71
SPG11-219ENST00000559822 BIDP55957 195 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 PIGFQ07326 219 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 ZNF74Q16587 644 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 GKAP1Q5VSY0 366 aaPredicted RBP10.6□□□□□ -0.71
SPG11-219ENST00000559822 METTL21CQ5VZV1 264 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 REP15Q6BDI9 236 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 UGT2A3Q6UWM9 527 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 SLC35D2Q76EJ3 337 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 HIST3H2AQ7L7L0 130 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 HDXQ7Z353 690 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 PIWIL3Q7Z3Z3 882 aaKnown RBP10.6□□□□□ -0.71
SPG11-219ENST00000559822 DPPA2Q7Z7J5 298 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 OR6T1Q8NGN1 323 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 OR6X1Q8NH79 312 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 HIST1H2ACQ93077 130 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 MSI2Q96DH6 328 aaKnown RBP10.6□□□□□ -0.71
SPG11-219ENST00000559822 SH3GL1Q99961 368 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms