RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 AHSA1O95433 338 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 PTHP01270 115 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 IGHV1-46P01743 117 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 SERPINA5P05154 406 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 B4GALT1P15291 398 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 RPS2P15880 293 aaKnown RBP8.11□□□□□ -1.11
SMAD3-211ENST00000559460 CD33P20138 364 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 MATN1P21941 496 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 CRHR1P34998 444 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 RPL3P39023 403 aaKnown RBP8.11□□□□□ -1.11
SMAD3-211ENST00000559460 ERVS71-1P61550 626 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 BTG1P62324 171 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 KCNJ10P78508 379 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 DCTN2Q13561 401 aaKnown RBP8.11□□□□□ -1.11
SMAD3-211ENST00000559460 ARHGAP11BQ3KRB8 267 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 UNC50Q53HI1 259 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 CARD17Q5XLA6 110 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 PIWIL3Q7Z3Z3 882 aaKnown RBP8.11□□□□□ -1.11
SMAD3-211ENST00000559460 POU5F2Q8N7G0 328 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 C11orf44Q8N8P7 122 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 SCCPDHQ8NBX0 429 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 OR4F17Q8NGA8 305 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 OR1J2Q8NGS2 313 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 OR5AK3PQ8NH89 298 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 SFXN5Q8TD22 340 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 SLC25A36Q96CQ1 311 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 ZNF837Q96EG3 531 aaPredicted RBP8.11□□□□□ -1.11
SMAD3-211ENST00000559460 METTL2AQ96IZ6 378 aaKnown RBP8.11□□□□□ -1.11
SMAD3-211ENST00000559460 OR4F4Q96R69 305 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 B9D2Q9BPU9 175 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 C1orf198Q9H425 327 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 TMEM165Q9HC07 324 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 MID1IP1Q9NPA3 183 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 TMEM106BQ9NUM4 274 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 GPATCH2Q9NW75 528 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 KCNE5Q9UJ90 142 aa8.11□□□□□ -1.11
SMAD3-211ENST00000559460 PRAMEF27A3QJZ7 478 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 A8MVM7 634 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 AP3D1O14617 1153 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 AGR2O95994 175 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 IGHV4-59P01825 116 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 TNFSF4P23510 183 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 GABRA5P31644 462 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 TGFBR2P37173 567 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 LIPAP38571 399 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 MDH2P40926 338 aaKnown RBP8.1□□□□□ -1.11
SMAD3-211ENST00000559460 FGF12P61328 243 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 COPZ1P61923 177 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 RPS26P62854 115 aaKnown RBP8.1□□□□□ -1.11
SMAD3-211ENST00000559460 TNFAIP6P98066 277 aaPredicted RBP8.1□□□□□ -1.11
SMAD3-211ENST00000559460 GNA13Q14344 377 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 NSUN5P1Q3KNT7 163 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 PGBD2Q6P3X8 592 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 UNQ6126/PRO20091Q6UXV3 157 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 NLRC3Q7RTR2 1065 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 SLC22A9Q8IVM8 553 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 DDIASQ8IXT1 998 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 KDM8Q8N371 416 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 SPERTQ8NA61 448 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 OR1J1Q8NGS3 322 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 GEMIN6Q8WXD5 167 aaKnown RBP8.1□□□□□ -1.11
SMAD3-211ENST00000559460 OR5P2Q8WZ92 322 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 ITPKCQ96DU7 683 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 SLC35G5Q96KT7 338 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 TMEM237Q96Q45 408 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 FOXB1Q99853 325 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 NUDT16L1Q9BRJ7 211 aaKnown RBP8.1□□□□□ -1.11
SMAD3-211ENST00000559460 PCGF1Q9BSM1 259 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 ULBP2Q9BZM5 246 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 ZNF350Q9GZX5 532 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 POLE3Q9NRF9 147 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 ACOXLQ9NUZ1 547 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 ATAD3AQ9NVI7 634 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 C1orf109Q9NX04 203 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 CGGBP1Q9UFW8 167 aaPredicted RBP8.1□□□□□ -1.11
SMAD3-211ENST00000559460 ZDHHC8Q9ULC8 765 aa8.1□□□□□ -1.11
SMAD3-211ENST00000559460 IQCMA0A1B0GVH7 501 aa8.09□□□□□ -1.11
SMAD3-211ENST00000559460 CFAP73A6NFT4 308 aa8.09□□□□□ -1.11
SMAD3-211ENST00000559460 F5H0A9 414 aaPredicted RBP8.09□□□□□ -1.11
SMAD3-211ENST00000559460 H3BQF6 201 aa8.09□□□□□ -1.11
SMAD3-211ENST00000559460 TNFRSF13BO14836 293 aaPredicted RBP8.09□□□□□ -1.11
SMAD3-211ENST00000559460 TP73O15350 636 aa8.09□□□□□ -1.11
SMAD3-211ENST00000559460 BCAS1O75363 584 aaPredicted RBP8.09□□□□□ -1.11
SMAD3-211ENST00000559460 TSPAN9O75954 239 aa8.09□□□□□ -1.11
SMAD3-211ENST00000559460 IGHV3-13P01766 116 aa8.09□□□□□ -1.11
SMAD3-211ENST00000559460 TFPTP0C1Z6 253 aa8.09□□□□□ -1.11
SMAD3-211ENST00000559460 SDC1P18827 310 aa8.09□□□□□ -1.11
SMAD3-211ENST00000559460 TNFRSF1AP19438 455 aa8.09□□□□□ -1.11
SMAD3-211ENST00000559460 IMPDH1P20839 514 aa8.09□□□□□ -1.11
SMAD3-211ENST00000559460 CPT2P23786 658 aa8.09□□□□□ -1.11
SMAD3-211ENST00000559460 P2RY4P51582 365 aa8.09□□□□□ -1.11
SMAD3-211ENST00000559460 UCP2P55851 309 aa8.09□□□□□ -1.11
SMAD3-211ENST00000559460 ETF1P62495 437 aaKnown RBP8.09□□□□□ -1.11
SMAD3-211ENST00000559460 EMX1Q04741 257 aaPredicted RBP8.09□□□□□ -1.11
SMAD3-211ENST00000559460 PLP2Q04941 152 aa8.09□□□□□ -1.11
SMAD3-211ENST00000559460 MFSD13AQ14CX5 517 aa8.09□□□□□ -1.11
SMAD3-211ENST00000559460 MAPK14Q16539 360 aa8.09□□□□□ -1.11
SMAD3-211ENST00000559460 GSTA3Q16772 222 aa8.09□□□□□ -1.11
SMAD3-211ENST00000559460 ZNF718Q3SXZ3 478 aa8.09□□□□□ -1.11
SMAD3-211ENST00000559460 DMRTC1Q5HYR2 192 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms